RNA–Protein interactions for RNA: ENST00000295886.4

NKX6-1-201, Transcript of NK6 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX6-1, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1-201ENST00000295886 CCDC124Q96CT7 223 aaKnown RBP20.08■□□□□ 0.8
NKX6-1-201ENST00000295886 FCRL3Q96P31 734 aaPredicted RBP20.08■□□□□ 0.8
NKX6-1-201ENST00000295886 RNF39Q9H2S5 420 aa20.08■□□□□ 0.8
NKX6-1-201ENST00000295886 MORF4L1Q9UBU8 362 aa20.08■□□□□ 0.8
NKX6-1-201ENST00000295886 RPS6KL1Q9Y6S9 549 aa20.08■□□□□ 0.8
NKX6-1-201ENST00000295886 LOC100653049A0A140TA62 436 aa20.07■□□□□ 0.8
NKX6-1-201ENST00000295886 KRT34O76011 436 aa20.07■□□□□ 0.8
NKX6-1-201ENST00000295886 UBTFL6P0CB48 400 aaPredicted RBP20.07■□□□□ 0.8
NKX6-1-201ENST00000295886 PAPOLAP51003 745 aaKnown RBP20.07■□□□□ 0.8
NKX6-1-201ENST00000295886 FBXO47Q5MNV8 452 aa20.07■□□□□ 0.8
NKX6-1-201ENST00000295886 SYPL2Q5VXT5 272 aa20.07■□□□□ 0.8
NKX6-1-201ENST00000295886 LRRC8BQ6P9F7 803 aa20.07■□□□□ 0.8
NKX6-1-201ENST00000295886 NT5DC4Q86YG4 428 aa20.07■□□□□ 0.8
NKX6-1-201ENST00000295886 EGFL6Q8IUX8 553 aa20.07■□□□□ 0.8
NKX6-1-201ENST00000295886 HIPK4Q8NE63 616 aa20.07■□□□□ 0.8
NKX6-1-201ENST00000295886 RNF139Q8WU17 664 aa20.07■□□□□ 0.8
NKX6-1-201ENST00000295886 PYDC1Q8WXC3 89 aa20.07■□□□□ 0.8
NKX6-1-201ENST00000295886 SORT1Q99523 831 aa20.07■□□□□ 0.8
NKX6-1-201ENST00000295886 PIDD1Q9HB75 910 aa20.07■□□□□ 0.8
NKX6-1-201ENST00000295886 MAN1C1Q9NR34 630 aa20.07■□□□□ 0.8
NKX6-1-201ENST00000295886 CACNG4Q9UBN1 327 aa20.07■□□□□ 0.8
NKX6-1-201ENST00000295886 ZNF212Q9UDV6 495 aa20.07■□□□□ 0.8
NKX6-1-201ENST00000295886 A0A088AWK7 358 aa20.07■□□□□ 0.8
NKX6-1-201ENST00000295886 SIN3BO75182 1162 aa20.07■□□□□ 0.8
NKX6-1-201ENST00000295886 GLRA3O75311 464 aa20.07■□□□□ 0.8
NKX6-1-201ENST00000295886 ACTR3P61158 418 aa20.07■□□□□ 0.8
NKX6-1-201ENST00000295886 USP4Q13107 963 aa20.07■□□□□ 0.8
NKX6-1-201ENST00000295886 OTUD1Q5VV17 481 aaPredicted RBP20.07■□□□□ 0.8
NKX6-1-201ENST00000295886 IZUMO2Q6UXV1 221 aa20.07■□□□□ 0.8
NKX6-1-201ENST00000295886 PID1Q7Z2X4 250 aa20.07■□□□□ 0.8
NKX6-1-201ENST00000295886 NET1Q7Z628 596 aaPredicted RBP20.07■□□□□ 0.8
NKX6-1-201ENST00000295886 CTU1Q7Z7A3 348 aaKnown RBP20.07■□□□□ 0.8
NKX6-1-201ENST00000295886 PLD6Q8N2A8 252 aaKnown RBP20.07■□□□□ 0.8
NKX6-1-201ENST00000295886 ZNF184Q99676 751 aaPredicted RBP20.07■□□□□ 0.8
NKX6-1-201ENST00000295886 GCOM2Q9BZD3 368 aaPredicted RBP20.07■□□□□ 0.8
NKX6-1-201ENST00000295886 CAB39LQ9H9S4 337 aa20.07■□□□□ 0.8
NKX6-1-201ENST00000295886 APOBEC2Q9Y235 224 aaKnown RBP20.07■□□□□ 0.8
NKX6-1-201ENST00000295886 CCDC78A2IDD5 438 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 FAM72CH0Y354 149 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 PGAM1P18669 254 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 NCF2P19878 526 aaPredicted RBP20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 DLG2Q15700 870 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 RABGAP1LQ5R372 815 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 FAM72AQ5TYM5 149 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 SMYD5Q6GMV2 418 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 FAM72DQ6L9T8 149 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 IRGCQ6NXR0 463 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 SLC27A1Q6PCB7 646 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 HFE2Q6ZVN8 426 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 FAM72BQ86X60 149 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 RAB3IL1Q8TBN0 382 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 RNF217Q8TC41 542 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 AGAP2Q99490 1192 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 SNX25Q9H3E2 840 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 TXNDC16Q9P2K2 825 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 KPNA7A9QM74 516 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 AMHP03971 560 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 FDFT1P37268 417 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 MATKP42679 507 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 IDH3AP50213 366 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 SNX16P57768 344 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 SOX4Q06945 474 aaPredicted RBP20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 DNAL1Q4LDG9 190 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 UNC93AQ86WB7 457 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 RNF169Q8NCN4 708 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 APOL2Q9BQE5 337 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 CPSF2Q9P2I0 782 aaKnown RBP20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 SOX13Q9UN79 622 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 ZNF487B1APH4 448 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 M0QYT0 321 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 PROCP04070 461 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 CD1EP15812 388 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 CNTFP26441 200 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 TRMT5Q32P41 509 aaKnown RBP20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 DCAF4L1Q3SXM0 396 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 C6orf163Q5TEZ5 329 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 MYLK4Q86YV6 388 aaPredicted RBP20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 ATP2A3Q93084 1043 aa20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.06■□□□□ 0.8
NKX6-1-201ENST00000295886 PLXNA1Q9UIW2 1896 aa20.05■□□□□ 0.8
NKX6-1-201ENST00000295886 GOLGA8TH3BQL2 631 aa20.05■□□□□ 0.8
NKX6-1-201ENST00000295886 AOC1P19801 751 aa20.05■□□□□ 0.8
NKX6-1-201ENST00000295886 LBRQ14739 615 aaKnown RBP20.05■□□□□ 0.8
NKX6-1-201ENST00000295886 LRRC52Q8N7C0 313 aa20.05■□□□□ 0.8
NKX6-1-201ENST00000295886 PPP1R36Q96LQ0 422 aa20.05■□□□□ 0.8
NKX6-1-201ENST00000295886 ADAMTS10Q9H324 1103 aa20.05■□□□□ 0.8
NKX6-1-201ENST00000295886 ETAA1Q9NY74 926 aa20.05■□□□□ 0.8
NKX6-1-201ENST00000295886 COPG2Q9UBF2 871 aa20.05■□□□□ 0.8
NKX6-1-201ENST00000295886 ANGPTL2Q9UKU9 493 aa20.05■□□□□ 0.8
NKX6-1-201ENST00000295886 KCNH4Q9UQ05 1017 aa20.05■□□□□ 0.8
NKX6-1-201ENST00000295886 KLHL33A6NCF5 533 aa20.05■□□□□ 0.8
NKX6-1-201ENST00000295886 F8W8V4 182 aa20.05■□□□□ 0.8
NKX6-1-201ENST00000295886 SERPINE1P05121 402 aa20.05■□□□□ 0.8
NKX6-1-201ENST00000295886 ZCCHC18P0CG32 403 aa20.05■□□□□ 0.8
NKX6-1-201ENST00000295886 GJA5P36382 358 aa20.05■□□□□ 0.8
NKX6-1-201ENST00000295886 IRF9Q00978 393 aa20.05■□□□□ 0.8
NKX6-1-201ENST00000295886 SLC25A52Q3SY17 297 aa20.05■□□□□ 0.8
NKX6-1-201ENST00000295886 PHTF2Q8N3S3 785 aa20.05■□□□□ 0.8
NKX6-1-201ENST00000295886 DCLK2Q8N568 766 aa20.05■□□□□ 0.8
NKX6-1-201ENST00000295886 ZNF669Q96BR6 464 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms