RNA–Protein interactions for RNA: ENST00000295550.8

COL6A3-201, Transcript of collagen type VI alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A3, Length 10,749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-201ENST00000295550 KATNAL2Q8IYT4 538 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 OXNAD1Q96HP4 312 aaPredicted RBP10.07□□□□□ -0.8
COL6A3-201ENST00000295550 PHACTR1Q9C0D0 580 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 MTMR12Q9C0I1 747 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 SH3GLB1Q9Y371 365 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 PTGES3LE9PB15 166 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 SEMA3DO95025 777 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 PPP2R1BP30154 601 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 CHN2P52757 468 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 GSTA3Q16772 222 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 MACC1Q6ZN28 852 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 ATG14Q6ZNE5 492 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 USP13Q92995 863 aaPredicted RBP10.07□□□□□ -0.8
COL6A3-201ENST00000295550 GPRC5CQ9NQ84 441 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 DNAJC16Q9Y2G8 782 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 GAKO14976 1311 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 MYBL2P10244 700 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 MAPK10P53779 464 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 MARSP56192 900 aaKnown RBP10.07□□□□□ -0.8
COL6A3-201ENST00000295550 DHFR2Q86XF0 187 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 ZNF671Q8TAW3 534 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 MNTQ99583 582 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 MGAT4DA6NG13 374 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 PCNAP12004 261 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 YWHAQP27348 245 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 STARP49675 285 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 RIPOR1Q6ZS17 1223 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 C4orf32Q8N8J7 132 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 DNAJC19Q96DA6 116 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 APOPT1Q96IL0 206 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 PURBQ96QR8 312 aaKnown RBP10.07□□□□□ -0.8
COL6A3-201ENST00000295550 KNTC1P50748 2209 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 UBR2Q8IWV8 1755 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 TBC1D12O60347 775 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 ALDH1A2O94788 518 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 CDH3P22223 829 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 RPS12P25398 132 aaKnown RBP10.07□□□□□ -0.8
COL6A3-201ENST00000295550 GRK4P32298 578 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 CAP2P40123 477 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 FAM9CQ8IZT9 166 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 FAM81AQ8TBF8 368 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 BTBD10Q9BSF8 475 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 DGCR6LQ9BY27 220 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 TCF7L2Q9NQB0 619 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 SH3BP4Q9P0V3 963 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 SLITRK3O94933 977 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 CYBBP04839 570 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 EPHB2P29323 1055 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 RCVRNP35243 200 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 ARMC6Q6NXE6 501 aa10.07□□□□□ -0.8
COL6A3-201ENST00000295550 PMPCBO75439 489 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 NAPEPLDQ6IQ20 393 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 POP1Q99575 1024 aaKnown RBP10.06□□□□□ -0.8
COL6A3-201ENST00000295550 MYLK2Q9H1R3 596 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 ING3Q9NXR8 418 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 COMMD9Q9P000 198 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 EPHB6O15197 1021 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 CD4P01730 458 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 RXRGP48443 463 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 GTF3C2Q8WUA4 911 aaPredicted RBP10.06□□□□□ -0.8
COL6A3-201ENST00000295550 TARS2Q9BW92 718 aaKnown RBP10.06□□□□□ -0.8
COL6A3-201ENST00000295550 CYP39A1Q9NYL5 469 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 NAALADL1Q9UQQ1 740 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 ACTL7BQ9Y614 415 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 DDX60Q8IY21 1712 aaKnown RBP10.06□□□□□ -0.8
COL6A3-201ENST00000295550 PRRC2BQ5JSZ5 2229 aaKnown RBP10.06□□□□□ -0.8
COL6A3-201ENST00000295550 TXNP10599 105 aaKnown RBP10.06□□□□□ -0.8
COL6A3-201ENST00000295550 DGCR6Q14129 220 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 ARHGEF19Q8IW93 802 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 OR7A2PQ8NGA2 310 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 GORASP1Q9BQQ3 440 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 GALNT8Q9NY28 637 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 ALADP13716 330 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 ITGA3P26006 1051 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 ERMARDQ5T6L9 678 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 KCNK18Q7Z418 384 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 AKAP14Q86UN6 197 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 SLC26A11Q86WA9 606 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 L3MBTL3Q96JM7 780 aaPredicted RBP10.06□□□□□ -0.8
COL6A3-201ENST00000295550 TPD52L2O43399 206 aaKnown RBP10.06□□□□□ -0.8
COL6A3-201ENST00000295550 MMP14P50281 582 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 FKBP1AP62942 108 aaKnown RBP10.06□□□□□ -0.8
COL6A3-201ENST00000295550 EPS8Q12929 822 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 TIMM50Q3ZCQ8 353 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 NUDT18Q6ZVK8 323 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 STRA8Q7Z7C7 330 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 EXOC3L1Q86VI1 746 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 ERO1BQ86YB8 467 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 ZNF668Q96K58 619 aaPredicted RBP10.06□□□□□ -0.8
COL6A3-201ENST00000295550 RUVBL2Q9Y230 463 aaKnown RBP10.06□□□□□ -0.8
COL6A3-201ENST00000295550 LDLRP01130 860 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 HNMTP50135 292 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 ABATP80404 500 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 HSF2Q03933 536 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 ANKS6Q68DC2 871 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 SLC22A9Q8IVM8 553 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 B3GALNT2Q8NCR0 500 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 WDR60Q8WVS4 1066 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 CYP4F12Q9HCS2 524 aa10.06□□□□□ -0.8
COL6A3-201ENST00000295550 PXMP2Q9NR77 195 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms