RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 MSH3P20585 1137 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 GTF2E2P29084 291 aaKnown RBP16.45■□□□□ 0.22
SSRP1-202ENST00000293880 ELF3P78545 371 aaPredicted RBP16.45■□□□□ 0.22
SSRP1-202ENST00000293880 TTMPQ5BVD1 217 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 GNASQ5JWF2 1037 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 PROSER1Q86XN7 944 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 ZNF75CPQ92670 426 aaPredicted RBP16.45■□□□□ 0.22
SSRP1-202ENST00000293880 NSMCE2Q96MF7 247 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 PLEKHG4BQ96PX9 1271 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 EPS8L2Q9H6S3 715 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 MYOZ2Q9NPC6 264 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 ABCB10Q9NRK6 738 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 NDUFA13Q9P0J0 144 aa16.45■□□□□ 0.22
SSRP1-202ENST00000293880 PIK3R1P27986 724 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 ANXA11P50995 505 aaKnown RBP16.44■□□□□ 0.22
SSRP1-202ENST00000293880 BCAP31P51572 246 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 CDC42EP1Q00587 391 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 PTPAQ15257 358 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 RNASE12Q5GAN4 147 aaKnown RBP16.44■□□□□ 0.22
SSRP1-202ENST00000293880 WASHC2DQ5SRD0 308 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 TCAIMQ8N3R3 496 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 LPAR1Q92633 364 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 RORBQ92753 470 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 USP7Q93009 1102 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 UBXN6Q9BZV1 441 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 AK9Q5TCS8 1911 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 FCGR1AP12314 374 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 NELFEP18615 380 aaKnown RBP16.44■□□□□ 0.22
SSRP1-202ENST00000293880 SULT1C3Q6IMI6 304 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 ZNF605Q86T29 641 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 PGLYRP2Q96PD5 576 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 CCDC3Q9BQI4 270 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 PHACTR1Q9C0D0 580 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 RHBGQ9H310 441 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 SAE1Q9UBE0 346 aaPredicted RBP16.44■□□□□ 0.22
SSRP1-202ENST00000293880 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.44■□□□□ 0.22
SSRP1-202ENST00000293880 CHURC1-FNTBB4DL54 471 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 MAP3K13O43283 966 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 POMCP01189 267 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 TPBGLP0DKB5 382 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 ITGALP20701 1170 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 PNPLA4P41247 253 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 CARTPTQ16568 116 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 CTXN3Q4LDR2 81 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 ZNF438Q7Z4V0 828 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 ITFG1Q8TB96 612 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 VPS45Q9NRW7 570 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 RABGEF1Q9UJ41 708 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 TNFAIP8O95379 198 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 ENO2P09104 434 aaPredicted RBP16.44■□□□□ 0.22
SSRP1-202ENST00000293880 RBP1P09455 135 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 RBBP4Q09028 425 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 ADIGQ0VDE8 80 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 STRIP1Q5VSL9 837 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 TMC3Q7Z5M5 1100 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 SLC22A9Q8IVM8 553 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 C15orf41Q9Y2V0 281 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 GMEB1Q9Y692 573 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 DPEP1P16444 411 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 SNRPFP62306 86 aaKnown RBP16.44■□□□□ 0.22
SSRP1-202ENST00000293880 NR1D2Q14995 579 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 TSEN2Q8NCE0 465 aaKnown RBP16.44■□□□□ 0.22
SSRP1-202ENST00000293880 BPIFB6Q8NFQ5 453 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 ZNRF3Q9ULT6 936 aa16.44■□□□□ 0.22
SSRP1-202ENST00000293880 UBQLN1Q9UMX0 589 aaKnown RBP16.44■□□□□ 0.22
SSRP1-202ENST00000293880 CENPXA8MT69 81 aa16.43■□□□□ 0.22
SSRP1-202ENST00000293880 USP12O75317 370 aa16.43■□□□□ 0.22
SSRP1-202ENST00000293880 PROSCO94903 275 aa16.43■□□□□ 0.22
SSRP1-202ENST00000293880 MED26O95402 600 aa16.43■□□□□ 0.22
SSRP1-202ENST00000293880 S100A6P06703 90 aa16.43■□□□□ 0.22
SSRP1-202ENST00000293880 TSPAN8P19075 237 aa16.43■□□□□ 0.22
SSRP1-202ENST00000293880 PRR5LQ6MZQ0 368 aa16.43■□□□□ 0.22
SSRP1-202ENST00000293880 ZNF621Q6ZSS3 439 aa16.43■□□□□ 0.22
SSRP1-202ENST00000293880 POMGNT2Q8NAT1 580 aa16.43■□□□□ 0.22
SSRP1-202ENST00000293880 MAGEE2Q8TD90 523 aaPredicted RBP16.43■□□□□ 0.22
SSRP1-202ENST00000293880 HPS1Q92902 700 aa16.43■□□□□ 0.22
SSRP1-202ENST00000293880 FRMD8P1Q9BZ68 369 aaPredicted RBP16.43■□□□□ 0.22
SSRP1-202ENST00000293880 GAKO14976 1311 aa16.43■□□□□ 0.22
SSRP1-202ENST00000293880 CCL15-CCL14A0A0B4J2E2 113 aa16.43■□□□□ 0.22
SSRP1-202ENST00000293880 BTN3A1O00481 513 aa16.43■□□□□ 0.22
SSRP1-202ENST00000293880 PGAM1P18669 254 aa16.43■□□□□ 0.22
SSRP1-202ENST00000293880 GSTT1P30711 240 aa16.43■□□□□ 0.22
SSRP1-202ENST00000293880 CCL15Q16663 113 aa16.43■□□□□ 0.22
SSRP1-202ENST00000293880 RABL6Q3YEC7 729 aaPredicted RBP16.43■□□□□ 0.22
SSRP1-202ENST00000293880 IL27RAQ6UWB1 636 aa16.43■□□□□ 0.22
SSRP1-202ENST00000293880 APLFQ8IW19 511 aaPredicted RBP16.43■□□□□ 0.22
SSRP1-202ENST00000293880 ZNF276Q8N554 614 aa16.43■□□□□ 0.22
SSRP1-202ENST00000293880 PPP1R13LQ8WUF5 828 aa16.43■□□□□ 0.22
SSRP1-202ENST00000293880 PARK7Q99497 189 aaKnown RBP16.43■□□□□ 0.22
SSRP1-202ENST00000293880 OSBPL6Q9BZF3 934 aa16.43■□□□□ 0.22
SSRP1-202ENST00000293880 CIPCQ9C0C6 399 aa16.43■□□□□ 0.22
SSRP1-202ENST00000293880 XPNPEP3Q9NQH7 507 aa16.43■□□□□ 0.22
SSRP1-202ENST00000293880 ZNF180Q9UJW8 692 aa16.43■□□□□ 0.22
SSRP1-202ENST00000293880 PRKAB1Q9Y478 270 aa16.43■□□□□ 0.22
SSRP1-202ENST00000293880 AKAP3O75969 853 aa16.43■□□□□ 0.22
SSRP1-202ENST00000293880 IFNA14P01570 189 aa16.43■□□□□ 0.22
SSRP1-202ENST00000293880 GSTM5P46439 218 aa16.43■□□□□ 0.22
SSRP1-202ENST00000293880 TRMT5Q32P41 509 aaKnown RBP16.43■□□□□ 0.22
SSRP1-202ENST00000293880 MFSD7Q6UXD7 560 aa16.43■□□□□ 0.22
SSRP1-202ENST00000293880 FBXO39Q8N4B4 442 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms