RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 CRYL1Q9Y2S2 319 aa17.65■□□□□ 0.42
SHANK1-201ENST00000293441 ZW10O43264 779 aa17.64■□□□□ 0.42
SHANK1-201ENST00000293441 NDUFS2O75306 463 aa17.64■□□□□ 0.42
SHANK1-201ENST00000293441 TRAF2Q12933 501 aa17.64■□□□□ 0.42
SHANK1-201ENST00000293441 PIK3R5Q8WYR1 880 aa17.64■□□□□ 0.42
SHANK1-201ENST00000293441 TMEM134Q9H6X4 195 aa17.64■□□□□ 0.42
SHANK1-201ENST00000293441 POLG2Q9UHN1 485 aa17.64■□□□□ 0.42
SHANK1-201ENST00000293441 TM9SF1O15321 606 aa17.64■□□□□ 0.41
SHANK1-201ENST00000293441 ADCY6O43306 1168 aa17.64■□□□□ 0.41
SHANK1-201ENST00000293441 GRK4P32298 578 aa17.64■□□□□ 0.41
SHANK1-201ENST00000293441 ARHGAP17Q68EM7 881 aa17.64■□□□□ 0.41
SHANK1-201ENST00000293441 MFSD7Q6UXD7 560 aa17.64■□□□□ 0.41
SHANK1-201ENST00000293441 CCDC149Q6ZUS6 474 aa17.64■□□□□ 0.41
SHANK1-201ENST00000293441 KIAA2013Q8IYS2 634 aa17.64■□□□□ 0.41
SHANK1-201ENST00000293441 SH3GL1Q99961 368 aa17.64■□□□□ 0.41
SHANK1-201ENST00000293441 PEX5P50542 639 aa17.64■□□□□ 0.41
SHANK1-201ENST00000293441 PTENP60484 403 aa17.64■□□□□ 0.41
SHANK1-201ENST00000293441 KCNT2Q6UVM3 1135 aa17.64■□□□□ 0.41
SHANK1-201ENST00000293441 NECAB2Q7Z6G3 386 aa17.64■□□□□ 0.41
SHANK1-201ENST00000293441 USP6NLQ92738 828 aa17.64■□□□□ 0.41
SHANK1-201ENST00000293441 UROC1Q96N76 676 aa17.64■□□□□ 0.41
SHANK1-201ENST00000293441 SNTNA6NMZ2 147 aa17.64■□□□□ 0.41
SHANK1-201ENST00000293441 RPN2P04844 631 aa17.64■□□□□ 0.41
SHANK1-201ENST00000293441 PPP2R1BP30154 601 aa17.64■□□□□ 0.41
SHANK1-201ENST00000293441 RASA2Q15283 850 aa17.64■□□□□ 0.41
SHANK1-201ENST00000293441 FNDC5Q8NAU1 212 aa17.64■□□□□ 0.41
SHANK1-201ENST00000293441 MCOLN3Q8TDD5 553 aa17.64■□□□□ 0.41
SHANK1-201ENST00000293441 VCPIP1Q96JH7 1222 aa17.64■□□□□ 0.41
SHANK1-201ENST00000293441 CPNE1Q99829 537 aa17.64■□□□□ 0.41
SHANK1-201ENST00000293441 BTN3A1O00481 513 aa17.64■□□□□ 0.41
SHANK1-201ENST00000293441 UBDO15205 165 aa17.64■□□□□ 0.41
SHANK1-201ENST00000293441 NFICP08651 508 aa17.64■□□□□ 0.41
SHANK1-201ENST00000293441 CYP20A1Q6UW02 462 aa17.64■□□□□ 0.41
SHANK1-201ENST00000293441 SCUBE1Q8IWY4 988 aa17.64■□□□□ 0.41
SHANK1-201ENST00000293441 CAMKK1Q8N5S9 505 aa17.64■□□□□ 0.41
SHANK1-201ENST00000293441 MID1IP1Q9NPA3 183 aa17.64■□□□□ 0.41
SHANK1-201ENST00000293441 SEPT3Q9UH03 358 aa17.64■□□□□ 0.41
SHANK1-201ENST00000293441 DNMT3LQ9UJW3 386 aa17.64■□□□□ 0.41
SHANK1-201ENST00000293441 A0A087X0B3 334 aa17.63■□□□□ 0.41
SHANK1-201ENST00000293441 CYP3A4P08684 503 aa17.63■□□□□ 0.41
SHANK1-201ENST00000293441 CCT8P50990 548 aa17.63■□□□□ 0.41
SHANK1-201ENST00000293441 HLA-DQA1Q5Y7H0 255 aa17.63■□□□□ 0.41
SHANK1-201ENST00000293441 MTDHQ86UE4 582 aaKnown RBP17.63■□□□□ 0.41
SHANK1-201ENST00000293441 FAM163AQ96GL9 167 aaPredicted RBP17.63■□□□□ 0.41
SHANK1-201ENST00000293441 PRKD2Q9BZL6 878 aa17.63■□□□□ 0.41
SHANK1-201ENST00000293441 PCDHA3Q9Y5H8 950 aa17.63■□□□□ 0.41
SHANK1-201ENST00000293441 MROH2AA6NES4 1674 aa17.63■□□□□ 0.41
SHANK1-201ENST00000293441 HACD1B0YJ81 288 aa17.63■□□□□ 0.41
SHANK1-201ENST00000293441 GRK2P25098 689 aa17.63■□□□□ 0.41
SHANK1-201ENST00000293441 DSG1Q02413 1049 aa17.63■□□□□ 0.41
SHANK1-201ENST00000293441 USP39Q53GS9 565 aaKnown RBP17.63■□□□□ 0.41
SHANK1-201ENST00000293441 TRPM4Q8TD43 1214 aa17.63■□□□□ 0.41
SHANK1-201ENST00000293441 CXorf40AQ8TE69 158 aa17.63■□□□□ 0.41
SHANK1-201ENST00000293441 POLR1EQ9GZS1 481 aaKnown RBP17.63■□□□□ 0.41
SHANK1-201ENST00000293441 FKTNO75072 461 aa17.63■□□□□ 0.41
SHANK1-201ENST00000293441 SEC22BO75396 215 aa17.63■□□□□ 0.41
SHANK1-201ENST00000293441 PARNO95453 639 aaKnown RBP17.63■□□□□ 0.41
SHANK1-201ENST00000293441 GLRA2P23416 452 aa17.63■□□□□ 0.41
SHANK1-201ENST00000293441 CRABP2P29373 138 aa17.63■□□□□ 0.41
SHANK1-201ENST00000293441 SERPINA4P29622 427 aa17.63■□□□□ 0.41
SHANK1-201ENST00000293441 MAP2K5Q13163 448 aa17.63■□□□□ 0.41
SHANK1-201ENST00000293441 NOMO2Q5JPE7 1267 aa17.63■□□□□ 0.41
SHANK1-201ENST00000293441 MARK2Q7KZI7 788 aaKnown RBP17.63■□□□□ 0.41
SHANK1-201ENST00000293441 KCNK18Q7Z418 384 aa17.63■□□□□ 0.41
SHANK1-201ENST00000293441 DENND1CQ8IV53 801 aa17.63■□□□□ 0.41
SHANK1-201ENST00000293441 NMRAL1Q9HBL8 299 aa17.63■□□□□ 0.41
SHANK1-201ENST00000293441 DNPEPQ9ULA0 475 aa17.63■□□□□ 0.41
SHANK1-201ENST00000293441 SLC15A5A6NIM6 579 aa17.63■□□□□ 0.41
SHANK1-201ENST00000293441 USP12O75317 370 aa17.63■□□□□ 0.41
SHANK1-201ENST00000293441 ZCCHC8Q6NZY4 707 aaKnown RBP17.63■□□□□ 0.41
SHANK1-201ENST00000293441 FGD2Q7Z6J4 655 aa17.63■□□□□ 0.41
SHANK1-201ENST00000293441 BBS4Q96RK4 519 aa17.63■□□□□ 0.41
SHANK1-201ENST00000293441 SLC40A1Q9NP59 571 aa17.63■□□□□ 0.41
SHANK1-201ENST00000293441 NAALADL1Q9UQQ1 740 aa17.63■□□□□ 0.41
SHANK1-201ENST00000293441 DNALI1O14645 258 aaPredicted RBP17.63■□□□□ 0.41
SHANK1-201ENST00000293441 NUDT14O95848 222 aa17.63■□□□□ 0.41
SHANK1-201ENST00000293441 C10orf88Q9H8K7 445 aa17.63■□□□□ 0.41
SHANK1-201ENST00000293441 ASAH2Q9NR71 780 aa17.63■□□□□ 0.41
SHANK1-201ENST00000293441 TRDMT1O14717 391 aaKnown RBP17.62■□□□□ 0.41
SHANK1-201ENST00000293441 GP5P40197 560 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 CLK2P49760 499 aaKnown RBP17.62■□□□□ 0.41
SHANK1-201ENST00000293441 VAC14Q08AM6 782 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 CRYMQ14894 314 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 C15orf59Q2T9L4 293 aaPredicted RBP17.62■□□□□ 0.41
SHANK1-201ENST00000293441 CCDC153Q494R4 210 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 PPP1R16AQ96I34 528 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 KLHL20Q9Y2M5 609 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 SF3B1O75533 1304 aaKnown RBP eCLIP17.62■□□□□ 0.41
SHANK1-201ENST00000293441 SKIV2L2P42285 1042 aaKnown RBP17.62■□□□□ 0.41
SHANK1-201ENST00000293441 MILR1Q7Z6M3 343 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 TRPC4APQ8TEL6 797 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 FIG4Q92562 907 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 MTMR8Q96EF0 704 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 ARMC7Q9H6L4 198 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 THOP1P52888 689 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 INSCQ1MX18 579 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 KIAA1324Q6UXG2 1013 aaKnown RBP17.62■□□□□ 0.41
SHANK1-201ENST00000293441 ATG16L2Q8NAA4 619 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 USP7Q93009 1102 aa17.62■□□□□ 0.41
SHANK1-201ENST00000293441 TPD52L3Q96J77 140 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms