RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 ZNF252P-AS1Q0IIN9 211 aa9.88□□□□□ -0.83
HMHB1-201ENST00000289448 MAN2A1Q16706 1144 aa9.88□□□□□ -0.83
HMHB1-201ENST00000289448 PLEKHG6Q3KR16 790 aa9.88□□□□□ -0.83
HMHB1-201ENST00000289448 SYCP2LQ5T4T6 812 aa9.88□□□□□ -0.83
HMHB1-201ENST00000289448 DCAF12L1Q5VU92 463 aa9.88□□□□□ -0.83
HMHB1-201ENST00000289448 RABEPKQ7Z6M1 372 aa9.88□□□□□ -0.83
HMHB1-201ENST00000289448 LGI2Q8N0V4 545 aa9.88□□□□□ -0.83
HMHB1-201ENST00000289448 DEFB106AQ8N104 65 aa9.88□□□□□ -0.83
HMHB1-201ENST00000289448 CARNMT1Q8N4J0 409 aa9.88□□□□□ -0.83
HMHB1-201ENST00000289448 MINDY1Q8N5J2 469 aa9.88□□□□□ -0.83
HMHB1-201ENST00000289448 C1orf131Q8NDD1 294 aaKnown RBP9.88□□□□□ -0.83
HMHB1-201ENST00000289448 CADM4Q8NFZ8 388 aa9.88□□□□□ -0.83
HMHB1-201ENST00000289448 C1orf216Q8TAB5 229 aa9.88□□□□□ -0.83
HMHB1-201ENST00000289448 PPP1R13BQ96KQ4 1090 aa9.88□□□□□ -0.83
HMHB1-201ENST00000289448 FAM81BQ96LP2 452 aa9.88□□□□□ -0.83
HMHB1-201ENST00000289448 SLC2A13Q96QE2 648 aa9.88□□□□□ -0.83
HMHB1-201ENST00000289448 PRMT1Q99873 361 aaKnown RBP9.88□□□□□ -0.83
HMHB1-201ENST00000289448 NUP58Q9BVL2 599 aa9.88□□□□□ -0.83
HMHB1-201ENST00000289448 ADAM33Q9BZ11 813 aa9.88□□□□□ -0.83
HMHB1-201ENST00000289448 NDST4Q9H3R1 872 aa9.88□□□□□ -0.83
HMHB1-201ENST00000289448 C6orf106Q9H6K1 298 aaPredicted RBP9.88□□□□□ -0.83
HMHB1-201ENST00000289448 PLCB1Q9NQ66 1216 aa9.88□□□□□ -0.83
HMHB1-201ENST00000289448 PCDHGC3Q9UN70 934 aa9.88□□□□□ -0.83
HMHB1-201ENST00000289448 CELSR3Q9NYQ7 3312 aa9.87□□□□□ -0.83
HMHB1-201ENST00000289448 SPAARA0A1B0GVQ0 90 aa9.87□□□□□ -0.83
HMHB1-201ENST00000289448 FAM170AA1A519 330 aa9.87□□□□□ -0.83
HMHB1-201ENST00000289448 MEI4A8MW99 385 aa9.87□□□□□ -0.83
HMHB1-201ENST00000289448 UPK3BL1B0FP48 263 aa9.87□□□□□ -0.83
HMHB1-201ENST00000289448 UPK3BL2E5RIL1 263 aa9.87□□□□□ -0.83
HMHB1-201ENST00000289448 KRT37O76014 449 aa9.87□□□□□ -0.83
HMHB1-201ENST00000289448 LUC7L3O95232 432 aaKnown RBP9.87□□□□□ -0.83
HMHB1-201ENST00000289448 ERBB2P04626 1255 aa9.87□□□□□ -0.83
HMHB1-201ENST00000289448 ATP5BP06576 529 aaKnown RBP9.87□□□□□ -0.83
HMHB1-201ENST00000289448 ERCC5P28715 1186 aaPredicted RBP9.87□□□□□ -0.83
HMHB1-201ENST00000289448 ATXN3P54252 364 aaPredicted RBP9.87□□□□□ -0.83
HMHB1-201ENST00000289448 KCNMA1Q12791 1236 aa9.87□□□□□ -0.83
HMHB1-201ENST00000289448 FOXC1Q12948 553 aa9.87□□□□□ -0.83
HMHB1-201ENST00000289448 GRIK2Q13002 908 aa9.87□□□□□ -0.83
HMHB1-201ENST00000289448 E2F5Q15329 346 aa9.87□□□□□ -0.83
HMHB1-201ENST00000289448 TPD52L1Q16890 204 aaPredicted RBP9.87□□□□□ -0.83
HMHB1-201ENST00000289448 PTPN20Q4JDL3 420 aa9.87□□□□□ -0.83
HMHB1-201ENST00000289448 VWA3BQ502W6 1294 aa9.87□□□□□ -0.83
HMHB1-201ENST00000289448 PITRM1Q5JRX3 1037 aa9.87□□□□□ -0.83
HMHB1-201ENST00000289448 WDR45BQ5MNZ6 344 aa9.87□□□□□ -0.83
HMHB1-201ENST00000289448 OTUD1Q5VV17 481 aaPredicted RBP9.87□□□□□ -0.83
HMHB1-201ENST00000289448 OLFML1Q6UWY5 402 aa9.87□□□□□ -0.83
HMHB1-201ENST00000289448 FAM183BPQ6ZVS7 135 aa9.87□□□□□ -0.83
HMHB1-201ENST00000289448 CIR1Q86X95 450 aaPredicted RBP9.87□□□□□ -0.83
HMHB1-201ENST00000289448 FAM71AQ8IYT1 594 aa9.87□□□□□ -0.83
HMHB1-201ENST00000289448 APCDD1Q8J025 514 aa9.87□□□□□ -0.83
HMHB1-201ENST00000289448 ZCCHC9Q8N567 271 aaKnown RBP9.87□□□□□ -0.83
HMHB1-201ENST00000289448 BTN2A3PQ96KV6 586 aa9.87□□□□□ -0.83
HMHB1-201ENST00000289448 CAMK1GQ96NX5 476 aa9.87□□□□□ -0.83
HMHB1-201ENST00000289448 DDX50Q9BQ39 737 aaKnown RBP9.87□□□□□ -0.83
HMHB1-201ENST00000289448 TUBGCP2Q9BSJ2 902 aa9.87□□□□□ -0.83
HMHB1-201ENST00000289448 MIR1-1HGQ9H1L0 117 aa9.87□□□□□ -0.83
HMHB1-201ENST00000289448 LHX5Q9H2C1 402 aa9.87□□□□□ -0.83
HMHB1-201ENST00000289448 SAMSN1Q9NSI8 373 aaKnown RBP9.87□□□□□ -0.83
HMHB1-201ENST00000289448 DNAAF2Q9NVR5 837 aaKnown RBP9.87□□□□□ -0.83
HMHB1-201ENST00000289448 ASNSD1Q9NWL6 643 aa9.87□□□□□ -0.83
HMHB1-201ENST00000289448 EIF2B4Q9UI10 523 aaKnown RBP9.87□□□□□ -0.83
HMHB1-201ENST00000289448 SLCO3A1Q9UIG8 710 aa9.87□□□□□ -0.83
HMHB1-201ENST00000289448 NFE2L3Q9Y4A8 694 aa9.87□□□□□ -0.83
HMHB1-201ENST00000289448 SYNJ2BP-COX16A0A087WUM0 186 aa9.86□□□□□ -0.83
HMHB1-201ENST00000289448 A0A1B0GTW7 788 aa9.86□□□□□ -0.83
HMHB1-201ENST00000289448 TTC34A8MYJ7 566 aa9.86□□□□□ -0.83
HMHB1-201ENST00000289448 OPHN1O60890 802 aa9.86□□□□□ -0.83
HMHB1-201ENST00000289448 SIN3BO75182 1162 aa9.86□□□□□ -0.83
HMHB1-201ENST00000289448 APOEP02649 317 aa9.86□□□□□ -0.83
HMHB1-201ENST00000289448 GLI1P08151 1106 aa9.86□□□□□ -0.83
HMHB1-201ENST00000289448 SYPP08247 313 aa9.86□□□□□ -0.83
HMHB1-201ENST00000289448 PRKCSHP14314 528 aaPredicted RBP9.86□□□□□ -0.83
HMHB1-201ENST00000289448 GNSP15586 552 aa9.86□□□□□ -0.83
HMHB1-201ENST00000289448 TFE3P19532 575 aaPredicted RBP9.86□□□□□ -0.83
HMHB1-201ENST00000289448 GGCXP38435 758 aa9.86□□□□□ -0.83
HMHB1-201ENST00000289448 IRAK1P51617 712 aa9.86□□□□□ -0.83
HMHB1-201ENST00000289448 CDK17Q00537 523 aa9.86□□□□□ -0.83
HMHB1-201ENST00000289448 PTK2Q05397 1052 aa9.86□□□□□ -0.83
HMHB1-201ENST00000289448 CDH18Q13634 790 aa9.86□□□□□ -0.83
HMHB1-201ENST00000289448 HNRNPA1L2Q32P51 320 aaKnown RBP9.86□□□□□ -0.83
HMHB1-201ENST00000289448 C9orf64Q5T6V5 341 aa9.86□□□□□ -0.83
HMHB1-201ENST00000289448 KLHDC7AQ5VTJ3 777 aa9.86□□□□□ -0.83
HMHB1-201ENST00000289448 OR6B2Q6IFH4 312 aa9.86□□□□□ -0.83
HMHB1-201ENST00000289448 C11orf57Q6ZUT1 292 aaPredicted RBP9.86□□□□□ -0.83
HMHB1-201ENST00000289448 CHSY1Q86X52 802 aa9.86□□□□□ -0.83
HMHB1-201ENST00000289448 HDDC3Q8N4P3 179 aa9.86□□□□□ -0.83
HMHB1-201ENST00000289448 IGSF8Q969P0 613 aa9.86□□□□□ -0.83
HMHB1-201ENST00000289448 TRIM62Q9BVG3 475 aa9.86□□□□□ -0.83
HMHB1-201ENST00000289448 NAA15Q9BXJ9 866 aaKnown RBP9.86□□□□□ -0.83
HMHB1-201ENST00000289448 NUP62CLQ9H1M0 184 aa9.86□□□□□ -0.83
HMHB1-201ENST00000289448 RSPH9Q9H1X1 276 aaPredicted RBP9.86□□□□□ -0.83
HMHB1-201ENST00000289448 FAM204AQ9H8W3 233 aa9.86□□□□□ -0.83
HMHB1-201ENST00000289448 IL21RQ9HBE5 538 aa9.86□□□□□ -0.83
HMHB1-201ENST00000289448 ANLNQ9NQW6 1124 aa9.86□□□□□ -0.83
HMHB1-201ENST00000289448 LMBRD1Q9NUN5 540 aa9.86□□□□□ -0.83
HMHB1-201ENST00000289448 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.86□□□□□ -0.83
HMHB1-201ENST00000289448 DDIT4Q9NX09 232 aa9.86□□□□□ -0.83
HMHB1-201ENST00000289448 COX16Q9P0S2 106 aa9.86□□□□□ -0.83
HMHB1-201ENST00000289448 SERGEFQ9UGK8 458 aa9.86□□□□□ -0.83
HMHB1-201ENST00000289448 SUSD2Q9UGT4 822 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms