RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 ALLCQ8N6M5 410 aa20.51■□□□□ 0.87
TIMP4-201ENST00000287814 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.51■□□□□ 0.87
TIMP4-201ENST00000287814 NTAN1Q96AB6 310 aa20.51■□□□□ 0.87
TIMP4-201ENST00000287814 ACOX2Q99424 681 aa20.51■□□□□ 0.87
TIMP4-201ENST00000287814 IER2Q9BTL4 223 aa20.51■□□□□ 0.87
TIMP4-201ENST00000287814 TYW5A2RUC4 315 aaKnown RBP20.5■□□□□ 0.87
TIMP4-201ENST00000287814 DRGXA6NNA5 263 aa20.5■□□□□ 0.87
TIMP4-201ENST00000287814 E9PAM4 449 aa20.5■□□□□ 0.87
TIMP4-201ENST00000287814 H0Y858 1186 aa20.5■□□□□ 0.87
TIMP4-201ENST00000287814 LAMTOR5O43504 91 aa20.5■□□□□ 0.87
TIMP4-201ENST00000287814 SRGAP2O75044 1071 aa20.5■□□□□ 0.87
TIMP4-201ENST00000287814 CXCL12P48061 93 aa20.5■□□□□ 0.87
TIMP4-201ENST00000287814 MRPS21P82921 87 aaKnown RBP20.5■□□□□ 0.87
TIMP4-201ENST00000287814 LMAN2Q12907 356 aa20.5■□□□□ 0.87
TIMP4-201ENST00000287814 ARL13BQ3SXY8 428 aa20.5■□□□□ 0.87
TIMP4-201ENST00000287814 RABGAP1LQ5R372 815 aa20.5■□□□□ 0.87
TIMP4-201ENST00000287814 NUDT18Q6ZVK8 323 aa20.5■□□□□ 0.87
TIMP4-201ENST00000287814 ANKS1BQ7Z6G8 1248 aa20.5■□□□□ 0.87
TIMP4-201ENST00000287814 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.5■□□□□ 0.87
TIMP4-201ENST00000287814 ADIPOR2Q86V24 386 aa20.5■□□□□ 0.87
TIMP4-201ENST00000287814 PYROXD2Q8N2H3 581 aa20.5■□□□□ 0.87
TIMP4-201ENST00000287814 OR52K2Q8NGK3 314 aa20.5■□□□□ 0.87
TIMP4-201ENST00000287814 SORCS1Q8WY21 1168 aa20.5■□□□□ 0.87
TIMP4-201ENST00000287814 PEBP4Q96S96 227 aa20.5■□□□□ 0.87
TIMP4-201ENST00000287814 OSBPL2Q9H1P3 480 aa20.5■□□□□ 0.87
TIMP4-201ENST00000287814 PRMT8Q9NR22 394 aaPredicted RBP20.5■□□□□ 0.87
TIMP4-201ENST00000287814 MPP6Q9NZW5 540 aa20.5■□□□□ 0.87
TIMP4-201ENST00000287814 IMPACTQ9P2X3 320 aa20.5■□□□□ 0.87
TIMP4-201ENST00000287814 GGA2Q9UJY4 613 aa20.5■□□□□ 0.87
TIMP4-201ENST00000287814 INTS6Q9UL03 887 aaKnown RBP20.5■□□□□ 0.87
TIMP4-201ENST00000287814 IGLV3-10A0A075B6K4 115 aa20.49■□□□□ 0.87
TIMP4-201ENST00000287814 SOWAHDA6NJG2 315 aa20.49■□□□□ 0.87
TIMP4-201ENST00000287814 H0Y626 953 aa20.49■□□□□ 0.87
TIMP4-201ENST00000287814 ADAM23O75077 832 aa20.49■□□□□ 0.87
TIMP4-201ENST00000287814 KLF8O95600 359 aaPredicted RBP20.49■□□□□ 0.87
TIMP4-201ENST00000287814 TMEM253P0C7T8 217 aa20.49■□□□□ 0.87
TIMP4-201ENST00000287814 PABPC1P11940 636 aaKnown RBP20.49■□□□□ 0.87
TIMP4-201ENST00000287814 SCAPQ12770 1279 aa20.49■□□□□ 0.87
TIMP4-201ENST00000287814 CDH18Q13634 790 aa20.49■□□□□ 0.87
TIMP4-201ENST00000287814 SLFN11Q7Z7L1 901 aa20.49■□□□□ 0.87
TIMP4-201ENST00000287814 ZNF513Q8N8E2 541 aaPredicted RBP20.49■□□□□ 0.87
TIMP4-201ENST00000287814 TXNDC5Q8NBS9 432 aaKnown RBP20.49■□□□□ 0.87
TIMP4-201ENST00000287814 CTNNBL1Q8WYA6 563 aaPredicted RBP20.49■□□□□ 0.87
TIMP4-201ENST00000287814 ELOVL2Q9NXB9 296 aa20.49■□□□□ 0.87
TIMP4-201ENST00000287814 OR12D3Q9UGF7 316 aa20.49■□□□□ 0.87
TIMP4-201ENST00000287814 PCSK1NQ9UHG2 260 aa20.49■□□□□ 0.87
TIMP4-201ENST00000287814 ANAPC7Q9UJX3 599 aa20.49■□□□□ 0.87
TIMP4-201ENST00000287814 FZD10Q9ULW2 581 aa20.49■□□□□ 0.87
TIMP4-201ENST00000287814 A0A1B0GVM2 712 aa20.48■□□□□ 0.87
TIMP4-201ENST00000287814 TCAF2A6NFQ2 919 aa20.48■□□□□ 0.87
TIMP4-201ENST00000287814 K7ESF4 209 aa20.48■□□□□ 0.87
TIMP4-201ENST00000287814 SGK1O00141 431 aa20.48■□□□□ 0.87
TIMP4-201ENST00000287814 LRCH4O75427 683 aa20.48■□□□□ 0.87
TIMP4-201ENST00000287814 TDGF1P13385 188 aa20.48■□□□□ 0.87
TIMP4-201ENST00000287814 HNRNPLP14866 589 aaKnown RBP eCLIP20.48■□□□□ 0.87
TIMP4-201ENST00000287814 TCF4P15884 667 aa20.48■□□□□ 0.87
TIMP4-201ENST00000287814 MIPP30301 263 aa20.48■□□□□ 0.87
TIMP4-201ENST00000287814 CCR3P51677 355 aa20.48■□□□□ 0.87
TIMP4-201ENST00000287814 CSTF1Q05048 431 aaKnown RBP20.48■□□□□ 0.87
TIMP4-201ENST00000287814 MANEALQ5VSG8 457 aa20.48■□□□□ 0.87
TIMP4-201ENST00000287814 TTC39BQ5VTQ0 682 aaPredicted RBP20.48■□□□□ 0.87
TIMP4-201ENST00000287814 CXorf57Q6NSI4 855 aaKnown RBP20.48■□□□□ 0.87
TIMP4-201ENST00000287814 CYP4V2Q6ZWL3 525 aaPredicted RBP20.48■□□□□ 0.87
TIMP4-201ENST00000287814 CHST9Q7L1S5 443 aa20.48■□□□□ 0.87
TIMP4-201ENST00000287814 TMEM139Q8IV31 216 aa20.48■□□□□ 0.87
TIMP4-201ENST00000287814 OSGEPQ9NPF4 335 aa20.48■□□□□ 0.87
TIMP4-201ENST00000287814 WASH3PC4AMC7 463 aa20.48■□□□□ 0.87
TIMP4-201ENST00000287814 ATG13O75143 517 aa20.48■□□□□ 0.87
TIMP4-201ENST00000287814 LCA5LO95447 670 aa20.48■□□□□ 0.87
TIMP4-201ENST00000287814 WASP42768 502 aa20.48■□□□□ 0.87
TIMP4-201ENST00000287814 NUMBP49757 651 aa20.48■□□□□ 0.87
TIMP4-201ENST00000287814 FUT11Q495W5 492 aa20.48■□□□□ 0.87
TIMP4-201ENST00000287814 ACBD5Q5T8D3 534 aaPredicted RBP20.48■□□□□ 0.87
TIMP4-201ENST00000287814 LRRC31Q6UY01 552 aa20.48■□□□□ 0.87
TIMP4-201ENST00000287814 SYT13Q7L8C5 426 aa20.48■□□□□ 0.87
TIMP4-201ENST00000287814 CPNE8Q86YQ8 564 aa20.48■□□□□ 0.87
TIMP4-201ENST00000287814 CCDC170Q8IYT3 715 aa20.48■□□□□ 0.87
TIMP4-201ENST00000287814 CCDC26Q8TAB7 109 aa20.48■□□□□ 0.87
TIMP4-201ENST00000287814 ZNF564Q8TBZ8 553 aaPredicted RBP20.48■□□□□ 0.87
TIMP4-201ENST00000287814 PRRX2Q99811 253 aa20.48■□□□□ 0.87
TIMP4-201ENST00000287814 CIPCQ9C0C6 399 aa20.48■□□□□ 0.87
TIMP4-201ENST00000287814 GRPEL1Q9HAV7 217 aa20.48■□□□□ 0.87
TIMP4-201ENST00000287814 GPATCH2LQ9NWQ4 482 aa20.48■□□□□ 0.87
TIMP4-201ENST00000287814 CTTNBP2NLQ9P2B4 639 aa20.48■□□□□ 0.87
TIMP4-201ENST00000287814 MMP17Q9ULZ9 603 aa20.48■□□□□ 0.87
TIMP4-201ENST00000287814 NEU3Q9UQ49 428 aa20.48■□□□□ 0.87
TIMP4-201ENST00000287814 HCN4Q9Y3Q4 1203 aa20.48■□□□□ 0.87
TIMP4-201ENST00000287814 MUC6Q6W4X9 2439 aa20.47■□□□□ 0.87
TIMP4-201ENST00000287814 RNF8O76064 485 aa20.47■□□□□ 0.87
TIMP4-201ENST00000287814 LRIG2O94898 1065 aa20.47■□□□□ 0.87
TIMP4-201ENST00000287814 SP9P0CG40 484 aa20.47■□□□□ 0.87
TIMP4-201ENST00000287814 MZF1P28698 734 aaPredicted RBP20.47■□□□□ 0.87
TIMP4-201ENST00000287814 CDH4P55283 916 aa20.47■□□□□ 0.87
TIMP4-201ENST00000287814 NRG1Q02297 640 aaPredicted RBP20.47■□□□□ 0.87
TIMP4-201ENST00000287814 DMC1Q14565 340 aa20.47■□□□□ 0.87
TIMP4-201ENST00000287814 TMEM92Q6UXU6 159 aa20.47■□□□□ 0.87
TIMP4-201ENST00000287814 RAD9BQ6WBX8 426 aa20.47■□□□□ 0.87
TIMP4-201ENST00000287814 TMTC1Q8IUR5 882 aa20.47■□□□□ 0.87
TIMP4-201ENST00000287814 APCDD1Q8J025 514 aa20.47■□□□□ 0.87
TIMP4-201ENST00000287814 AHI1Q8N157 1196 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms