RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 NAGLUP54802 743 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 ESRRGP62508 458 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 FSTL1Q12841 308 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 TMEM132BQ14DG7 1078 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 TAF12Q16514 161 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 FOXB2Q5VYV0 432 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 MYLK4Q86YV6 388 aaPredicted RBP13.73□□□□□ -0.21
SCAF4-201ENST00000286835 ZNF781Q8N8C0 355 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 OR52K1Q8NGK4 314 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 RCN3Q96D15 328 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 DCUN1D1Q96GG9 259 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 DCUN1D5Q9BTE7 237 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 MAP3K20Q9NYL2 800 aaKnown RBP13.73□□□□□ -0.21
SCAF4-201ENST00000286835 THEGQ9P2T0 379 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 PPP2R3BQ9Y5P8 575 aa13.73□□□□□ -0.21
SCAF4-201ENST00000286835 RNF103-CHMP3A0A140T963 221 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 GOT1P17174 413 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 ADORA2AP29274 412 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 ASPAP45381 313 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 GABRB2P47870 512 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 IDH3AP50213 366 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 NME5P56597 212 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 SEL1L3Q68CR1 1132 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 TWF2Q6IBS0 349 aaKnown RBP13.72□□□□□ -0.21
SCAF4-201ENST00000286835 ARCQ7LC44 396 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 CMASQ8NFW8 434 aaPredicted RBP13.72□□□□□ -0.21
SCAF4-201ENST00000286835 PPP1R13LQ8WUF5 828 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 SDCBP2Q9H190 292 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 DHX33Q9H6R0 707 aaKnown RBP13.72□□□□□ -0.21
SCAF4-201ENST00000286835 ASB3Q9Y575 518 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 PCDHA11Q9Y5I1 949 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 NHSL1Q5SYE7 1610 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 A0A087WZ62 844 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 AKAP10O43572 662 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 NOL3O60936 208 aaKnown RBP13.72□□□□□ -0.21
SCAF4-201ENST00000286835 ZFXP17010 805 aaPredicted RBP13.72□□□□□ -0.21
SCAF4-201ENST00000286835 PGGT1BP53609 377 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 TPD52P55327 224 aaPredicted RBP13.72□□□□□ -0.21
SCAF4-201ENST00000286835 RBP5P82980 135 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 PDK1Q15118 436 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 CAND1Q86VP6 1230 aaKnown RBP13.72□□□□□ -0.21
SCAF4-201ENST00000286835 EXOC8Q8IYI6 725 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 SLC4A11Q8NBS3 891 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 FDXACB1Q9BRP7 624 aaPredicted RBP13.72□□□□□ -0.21
SCAF4-201ENST00000286835 A0A088AWK7 358 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 E7ESA3 106 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 PAPSS1O43252 624 aaPredicted RBP13.72□□□□□ -0.21
SCAF4-201ENST00000286835 PSMC3P17980 439 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 EEF1B2P24534 225 aaKnown RBP13.72□□□□□ -0.21
SCAF4-201ENST00000286835 PPM1LQ5SGD2 360 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 RWDD4Q6NW29 188 aaKnown RBP13.72□□□□□ -0.21
SCAF4-201ENST00000286835 IFNEQ86WN2 208 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 PYROXD2Q8N2H3 581 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 PQLC1Q8N2U9 271 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 FBXW8Q8N3Y1 598 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 LPIN3Q9BQK8 851 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 PSAT1Q9Y617 370 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 PDHXO00330 501 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 PLIN3O60664 434 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 PLA2G6O60733 806 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 PIGNO95427 931 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 TSHRP16473 764 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 FDFT1P37268 417 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 ITKQ08881 620 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 KLF10Q13118 480 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 TMEM259Q4ZIN3 620 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 SIX6OS1Q8N1H7 587 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 C1orf127Q8N9H9 656 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 NDRG1Q92597 394 aaKnown RBP13.72□□□□□ -0.21
SCAF4-201ENST00000286835 GPAMQ9HCL2 828 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 SYBUQ9NX95 663 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 DPP3Q9NY33 737 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 CDYLQ9Y232 598 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 COMMD10Q9Y6G5 202 aa13.72□□□□□ -0.21
SCAF4-201ENST00000286835 KLHL33A6NCF5 533 aa13.71□□□□□ -0.21
SCAF4-201ENST00000286835 FAM58BPP0C7Q3 252 aa13.71□□□□□ -0.21
SCAF4-201ENST00000286835 MPSTP25325 297 aa13.71□□□□□ -0.21
SCAF4-201ENST00000286835 GP5P40197 560 aa13.71□□□□□ -0.21
SCAF4-201ENST00000286835 KIF19Q2TAC6 998 aa13.71□□□□□ -0.21
SCAF4-201ENST00000286835 AAGABQ6PD74 315 aa13.71□□□□□ -0.21
SCAF4-201ENST00000286835 LCA5Q86VQ0 697 aa13.71□□□□□ -0.21
SCAF4-201ENST00000286835 PREBQ9HCU5 417 aa13.71□□□□□ -0.21
SCAF4-201ENST00000286835 PCDHGC3Q9UN70 934 aa13.71□□□□□ -0.21
SCAF4-201ENST00000286835 BIRC5O15392 142 aa13.71□□□□□ -0.21
SCAF4-201ENST00000286835 TRIM13O60858 407 aa13.71□□□□□ -0.21
SCAF4-201ENST00000286835 GALK1P51570 392 aa13.71□□□□□ -0.21
SCAF4-201ENST00000286835 PDAP1Q13442 181 aaKnown RBP13.71□□□□□ -0.21
SCAF4-201ENST00000286835 PTK2BQ14289 1009 aa13.71□□□□□ -0.21
SCAF4-201ENST00000286835 STILQ15468 1287 aa13.71□□□□□ -0.21
SCAF4-201ENST00000286835 ADGRF2Q8IZF7 708 aa13.71□□□□□ -0.21
SCAF4-201ENST00000286835 NIPA2Q8N8Q9 360 aa13.71□□□□□ -0.21
SCAF4-201ENST00000286835 SNX31Q8N9S9 440 aa13.71□□□□□ -0.21
SCAF4-201ENST00000286835 UPF1Q92900 1129 aaKnown RBP eCLIP13.71□□□□□ -0.21
SCAF4-201ENST00000286835 OMDQ99983 421 aa13.71□□□□□ -0.21
SCAF4-201ENST00000286835 CCDC106Q9BWC9 280 aa13.71□□□□□ -0.21
SCAF4-201ENST00000286835 CDT1Q9H211 546 aa13.71□□□□□ -0.21
SCAF4-201ENST00000286835 SNX15Q9NRS6 342 aa13.71□□□□□ -0.21
SCAF4-201ENST00000286835 RGS17Q9UGC6 210 aaPredicted RBP13.71□□□□□ -0.21
SCAF4-201ENST00000286835 RUVBL2Q9Y230 463 aaKnown RBP13.71□□□□□ -0.21
SCAF4-201ENST00000286835 V9GYQ6 96 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms