RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 HOXC6P09630 235 aa11.65□□□□□ -0.54
SCLT1-201ENST00000281142 RGS2P41220 211 aa11.65□□□□□ -0.54
SCLT1-201ENST00000281142 OSTNP61366 133 aa11.65□□□□□ -0.54
SCLT1-201ENST00000281142 MRPS22P82650 360 aaKnown RBP11.65□□□□□ -0.54
SCLT1-201ENST00000281142 CDKL1Q00532 357 aa11.65□□□□□ -0.54
SCLT1-201ENST00000281142 TMED1Q13445 227 aa11.65□□□□□ -0.54
SCLT1-201ENST00000281142 PPM1LQ5SGD2 360 aa11.65□□□□□ -0.54
SCLT1-201ENST00000281142 B3GNT6Q6ZMB0 384 aa11.65□□□□□ -0.54
SCLT1-201ENST00000281142 CDR2LQ86X02 465 aaPredicted RBP11.65□□□□□ -0.54
SCLT1-201ENST00000281142 NETO2Q8NC67 525 aa11.65□□□□□ -0.54
SCLT1-201ENST00000281142 DEPTORQ8TB45 409 aa11.65□□□□□ -0.54
SCLT1-201ENST00000281142 ZNF668Q96K58 619 aaPredicted RBP11.65□□□□□ -0.54
SCLT1-201ENST00000281142 CATSPER2Q96P56 530 aa11.65□□□□□ -0.54
SCLT1-201ENST00000281142 TWNKQ96RR1 684 aa11.65□□□□□ -0.54
SCLT1-201ENST00000281142 NIF3L1Q9GZT8 377 aa11.65□□□□□ -0.54
SCLT1-201ENST00000281142 RBM38Q9H0Z9 239 aaKnown RBP11.65□□□□□ -0.54
SCLT1-201ENST00000281142 SDCBP2Q9H190 292 aa11.65□□□□□ -0.54
SCLT1-201ENST00000281142 LIN28AQ9H9Z2 209 aaKnown RBP11.65□□□□□ -0.54
SCLT1-201ENST00000281142 TUBGCP4Q9UGJ1 667 aa11.65□□□□□ -0.54
SCLT1-201ENST00000281142 ITGA11Q9UKX5 1188 aa11.65□□□□□ -0.54
SCLT1-201ENST00000281142 PSAT1Q9Y617 370 aa11.65□□□□□ -0.54
SCLT1-201ENST00000281142 ZNF195O14628 629 aa11.65□□□□□ -0.54
SCLT1-201ENST00000281142 CASQ2O14958 399 aaPredicted RBP11.65□□□□□ -0.54
SCLT1-201ENST00000281142 NELFEP18615 380 aaKnown RBP11.65□□□□□ -0.54
SCLT1-201ENST00000281142 CDH5P33151 784 aaPredicted RBP11.65□□□□□ -0.54
SCLT1-201ENST00000281142 RPL5P46777 297 aaKnown RBP11.65□□□□□ -0.54
SCLT1-201ENST00000281142 FLT3LGP49771 235 aa11.65□□□□□ -0.54
SCLT1-201ENST00000281142 TFAMQ00059 246 aaKnown RBP11.65□□□□□ -0.54
SCLT1-201ENST00000281142 PDE1CQ14123 709 aaPredicted RBP11.65□□□□□ -0.54
SCLT1-201ENST00000281142 PDK1Q15118 436 aa11.65□□□□□ -0.54
SCLT1-201ENST00000281142 LGSNQ5TDP6 509 aa11.65□□□□□ -0.54
SCLT1-201ENST00000281142 XRRA1Q6P2D8 792 aa11.65□□□□□ -0.54
SCLT1-201ENST00000281142 ZNF467Q7Z7K2 595 aaPredicted RBP11.65□□□□□ -0.54
SCLT1-201ENST00000281142 RNF168Q8IYW5 571 aaPredicted RBP11.65□□□□□ -0.54
SCLT1-201ENST00000281142 GALNT4Q8N4A0 578 aa11.65□□□□□ -0.54
SCLT1-201ENST00000281142 CEP70Q8NHQ1 597 aa11.65□□□□□ -0.54
SCLT1-201ENST00000281142 ADAM32Q8TC27 787 aa11.65□□□□□ -0.54
SCLT1-201ENST00000281142 SIGLEC10Q96LC7 697 aa11.65□□□□□ -0.54
SCLT1-201ENST00000281142 SENP6Q9GZR1 1112 aaPredicted RBP11.65□□□□□ -0.54
SCLT1-201ENST00000281142 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.64□□□□□ -0.55
SCLT1-201ENST00000281142 RBM47A0AV96 593 aaKnown RBP11.64□□□□□ -0.55
SCLT1-201ENST00000281142 FAM159BA6NKW6 160 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 H3BSA7 217 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 BIRC5O15392 142 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 FBXO21O94952 628 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 KLHL2O95198 593 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 SNAI1O95863 264 aaPredicted RBP11.64□□□□□ -0.55
SCLT1-201ENST00000281142 KCNA2P16389 499 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 VARSP26640 1264 aaKnown RBP11.64□□□□□ -0.55
SCLT1-201ENST00000281142 SLC5A2P31639 672 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 TCF7P36402 384 aaPredicted RBP11.64□□□□□ -0.55
SCLT1-201ENST00000281142 ASPAP45381 313 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 SLC10A2Q12908 348 aaPredicted RBP11.64□□□□□ -0.55
SCLT1-201ENST00000281142 CA9Q16790 459 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 KLC3Q6P597 504 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 MAMDC4Q6UXC1 1216 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 ZNF554Q86TJ5 538 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 FBXO16Q8IX29 292 aaPredicted RBP11.64□□□□□ -0.55
SCLT1-201ENST00000281142 PQLC1Q8N2U9 271 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 PQLC3Q8N755 202 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 PLD5Q8N7P1 536 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 MAPK15Q8TD08 544 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 ATP6V0A1Q93050 837 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 APBA2Q99767 749 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 TINF2Q9BSI4 451 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 FRMD8P1Q9BZ68 369 aaPredicted RBP11.64□□□□□ -0.55
SCLT1-201ENST00000281142 COPS7BQ9H9Q2 264 aaPredicted RBP11.64□□□□□ -0.55
SCLT1-201ENST00000281142 MKS1Q9NXB0 559 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 AP4B1Q9Y6B7 739 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 GOLGA8QA0A0J9YX86 632 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 GOLGA8OA6NCC3 632 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 GOLGA8NF8WBI6 632 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 AIM2O14862 343 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 DGKIO75912 1065 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 COX4I1P13073 169 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 EMP3P54852 163 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 ADARP55265 1226 aaKnown RBP11.64□□□□□ -0.55
SCLT1-201ENST00000281142 ENPEPQ07075 957 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 ITGA9Q13797 1035 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 ACAP1Q15027 740 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 CNGA3Q16281 694 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 TMEM259Q4ZIN3 620 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 SLC9B1Q4ZJI4 515 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 MAP3K21Q5TCX8 1036 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 PPP1R2P3Q6NXS1 205 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 AMIGO2Q86SJ2 522 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 LILRA2Q8N149 483 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 MARVELD2Q8N4S9 558 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.64□□□□□ -0.55
SCLT1-201ENST00000281142 JADE3Q92613 823 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 TCHPQ9BT92 498 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 RSAD1Q9HA92 442 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 ARHGEF38Q9NXL2 777 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 TMEM216Q9P0N5 145 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 PAK5Q9P286 719 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 PCDHGC3Q9UN70 934 aa11.64□□□□□ -0.55
SCLT1-201ENST00000281142 ASB14A6NK59 587 aa11.63□□□□□ -0.55
SCLT1-201ENST00000281142 AP1G1O43747 822 aa11.63□□□□□ -0.55
SCLT1-201ENST00000281142 PLIN3O60664 434 aa11.63□□□□□ -0.55
SCLT1-201ENST00000281142 ZBED1O96006 694 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms