RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 SEMA5AQ13591 1074 aa18.43■□□□□ 0.54
CAPN1-201ENST00000279247 PM20D1Q6GTS8 502 aa18.43■□□□□ 0.54
CAPN1-201ENST00000279247 SCD5Q86SK9 330 aa18.43■□□□□ 0.54
CAPN1-201ENST00000279247 SLC44A1Q8WWI5 657 aa18.43■□□□□ 0.54
CAPN1-201ENST00000279247 TTC17Q96AE7 1141 aa18.43■□□□□ 0.54
CAPN1-201ENST00000279247 STAMBPL1Q96FJ0 436 aa18.43■□□□□ 0.54
CAPN1-201ENST00000279247 SGSM3Q96HU1 749 aa18.43■□□□□ 0.54
CAPN1-201ENST00000279247 ABCF3Q9NUQ8 709 aa18.43■□□□□ 0.54
CAPN1-201ENST00000279247 ACTL7BQ9Y614 415 aa18.43■□□□□ 0.54
CAPN1-201ENST00000279247 HACD1B0YJ81 288 aa18.43■□□□□ 0.54
CAPN1-201ENST00000279247 ATP9BO43861 1147 aa18.43■□□□□ 0.54
CAPN1-201ENST00000279247 LPXNO60711 386 aa18.43■□□□□ 0.54
CAPN1-201ENST00000279247 PAGE1O75459 146 aa18.43■□□□□ 0.54
CAPN1-201ENST00000279247 TOP3BO95985 862 aaKnown RBP18.43■□□□□ 0.54
CAPN1-201ENST00000279247 APOEP02649 317 aa18.43■□□□□ 0.54
CAPN1-201ENST00000279247 DSC1Q08554 894 aa18.43■□□□□ 0.54
CAPN1-201ENST00000279247 MGAT5BQ3V5L5 792 aa18.43■□□□□ 0.54
CAPN1-201ENST00000279247 C6orf89Q6UWU4 347 aa18.43■□□□□ 0.54
CAPN1-201ENST00000279247 TMEM173Q86WV6 379 aaPredicted RBP18.43■□□□□ 0.54
CAPN1-201ENST00000279247 NTAN1Q96AB6 310 aa18.43■□□□□ 0.54
CAPN1-201ENST00000279247 MAGEB18Q96M61 343 aa18.43■□□□□ 0.54
CAPN1-201ENST00000279247 FAM111AQ96PZ2 611 aa18.43■□□□□ 0.54
CAPN1-201ENST00000279247 NDFIP2Q9NV92 336 aa18.43■□□□□ 0.54
CAPN1-201ENST00000279247 IQANK1A0A1B0GTG1 560 aa18.42■□□□□ 0.54
CAPN1-201ENST00000279247 SNX3O60493 162 aa18.42■□□□□ 0.54
CAPN1-201ENST00000279247 SARNPP82979 210 aaKnown RBP18.42■□□□□ 0.54
CAPN1-201ENST00000279247 PAFAH1B3Q15102 231 aaKnown RBP18.42■□□□□ 0.54
CAPN1-201ENST00000279247 TCTN1Q2MV58 587 aa18.42■□□□□ 0.54
CAPN1-201ENST00000279247 PDZD4Q76G19 769 aaPredicted RBP18.42■□□□□ 0.54
CAPN1-201ENST00000279247 LRRC8CQ8TDW0 803 aa18.42■□□□□ 0.54
CAPN1-201ENST00000279247 SLC9A7Q96T83 725 aa18.42■□□□□ 0.54
CAPN1-201ENST00000279247 CCDC134Q9H6E4 229 aa18.42■□□□□ 0.54
CAPN1-201ENST00000279247 SYBUQ9NX95 663 aa18.42■□□□□ 0.54
CAPN1-201ENST00000279247 C2CD2LO14523 706 aa18.42■□□□□ 0.54
CAPN1-201ENST00000279247 ENPP3O14638 875 aa18.42■□□□□ 0.54
CAPN1-201ENST00000279247 TYROBPO43914 113 aa18.42■□□□□ 0.54
CAPN1-201ENST00000279247 OPHN1O60890 802 aa18.42■□□□□ 0.54
CAPN1-201ENST00000279247 CCL5P13501 91 aa18.42■□□□□ 0.54
CAPN1-201ENST00000279247 SEMA3BQ13214 749 aa18.42■□□□□ 0.54
CAPN1-201ENST00000279247 TFAP2DQ7Z6R9 452 aa18.42■□□□□ 0.54
CAPN1-201ENST00000279247 CCDC63Q8NA47 563 aa18.42■□□□□ 0.54
CAPN1-201ENST00000279247 FCRL2Q96LA5 508 aaPredicted RBP18.42■□□□□ 0.54
CAPN1-201ENST00000279247 SMG5Q9UPR3 1016 aaKnown RBP18.42■□□□□ 0.54
CAPN1-201ENST00000279247 EFEMP1Q12805 493 aa18.41■□□□□ 0.54
CAPN1-201ENST00000279247 FAM117BQ6P1L5 589 aa18.41■□□□□ 0.54
CAPN1-201ENST00000279247 OTOP3Q7RTS5 596 aa18.41■□□□□ 0.54
CAPN1-201ENST00000279247 PIGWQ7Z7B1 504 aa18.41■□□□□ 0.54
CAPN1-201ENST00000279247 SLC26A11Q86WA9 606 aa18.41■□□□□ 0.54
CAPN1-201ENST00000279247 ZNF354CQ86Y25 554 aa18.41■□□□□ 0.54
CAPN1-201ENST00000279247 MCUQ8NE86 351 aa18.41■□□□□ 0.54
CAPN1-201ENST00000279247 DIS3LQ8TF46 1054 aaKnown RBP18.41■□□□□ 0.54
CAPN1-201ENST00000279247 SENP1Q9P0U3 644 aa18.41■□□□□ 0.54
CAPN1-201ENST00000279247 GMIPQ9P107 970 aa18.41■□□□□ 0.54
CAPN1-201ENST00000279247 TSC2P49815 1807 aa18.41■□□□□ 0.54
CAPN1-201ENST00000279247 IRAK2O43187 625 aa18.41■□□□□ 0.54
CAPN1-201ENST00000279247 RPL17P18621 184 aaKnown RBP18.41■□□□□ 0.54
CAPN1-201ENST00000279247 NFKB1P19838 968 aa18.41■□□□□ 0.54
CAPN1-201ENST00000279247 TYMPP19971 482 aa18.41■□□□□ 0.54
CAPN1-201ENST00000279247 FDFT1P37268 417 aa18.41■□□□□ 0.54
CAPN1-201ENST00000279247 ABCG1P45844 678 aa18.41■□□□□ 0.54
CAPN1-201ENST00000279247 OVGP1Q12889 678 aa18.41■□□□□ 0.54
CAPN1-201ENST00000279247 GPNMBQ14956 572 aa18.41■□□□□ 0.54
CAPN1-201ENST00000279247 GSDMBQ8TAX9 411 aa18.41■□□□□ 0.54
CAPN1-201ENST00000279247 XAB2Q9HCS7 855 aaKnown RBP18.41■□□□□ 0.54
CAPN1-201ENST00000279247 ADAM28Q9UKQ2 775 aa18.41■□□□□ 0.54
CAPN1-201ENST00000279247 TBKBP1A7MCY6 615 aa18.41■□□□□ 0.54
CAPN1-201ENST00000279247 DNM1LO00429 736 aa18.41■□□□□ 0.54
CAPN1-201ENST00000279247 TPSB2P20231 275 aa18.41■□□□□ 0.54
CAPN1-201ENST00000279247 GLUD2P49448 558 aa18.41■□□□□ 0.54
CAPN1-201ENST00000279247 TPSAB1Q15661 275 aa18.41■□□□□ 0.54
CAPN1-201ENST00000279247 SPATA21Q7Z572 469 aa18.41■□□□□ 0.54
CAPN1-201ENST00000279247 DENND1AQ8TEH3 1009 aa18.41■□□□□ 0.54
CAPN1-201ENST00000279247 GIPC2Q8TF65 315 aa18.41■□□□□ 0.54
CAPN1-201ENST00000279247 MZB1Q8WU39 189 aa18.41■□□□□ 0.54
CAPN1-201ENST00000279247 DHRS4Q9BTZ2 278 aa18.41■□□□□ 0.54
CAPN1-201ENST00000279247 PHACTR1Q9C0D0 580 aa18.41■□□□□ 0.54
CAPN1-201ENST00000279247 ABCC13Q9NSE7 274 aa18.41■□□□□ 0.54
CAPN1-201ENST00000279247 PCMTD2Q9NV79 361 aa18.41■□□□□ 0.54
CAPN1-201ENST00000279247 GOLGA8TH3BQL2 631 aa18.4■□□□□ 0.54
CAPN1-201ENST00000279247 TNFRSF10BO14763 440 aa18.4■□□□□ 0.54
CAPN1-201ENST00000279247 GNRH1P01148 92 aa18.4■□□□□ 0.54
CAPN1-201ENST00000279247 GMPRP36959 345 aa18.4■□□□□ 0.54
CAPN1-201ENST00000279247 SCAPQ12770 1279 aa18.4■□□□□ 0.54
CAPN1-201ENST00000279247 CGB2Q6NT52 195 aa18.4■□□□□ 0.54
CAPN1-201ENST00000279247 PRSS55Q6UWB4 352 aaPredicted RBP18.4■□□□□ 0.54
CAPN1-201ENST00000279247 TMCO2Q7Z6W1 182 aaPredicted RBP18.4■□□□□ 0.54
CAPN1-201ENST00000279247 DCP1BQ8IZD4 617 aaKnown RBP18.4■□□□□ 0.54
CAPN1-201ENST00000279247 IQCGQ9H095 443 aaKnown RBP18.4■□□□□ 0.54
CAPN1-201ENST00000279247 TMEM161AQ9NX61 479 aa18.4■□□□□ 0.54
CAPN1-201ENST00000279247 VANGL2Q9ULK5 521 aa18.4■□□□□ 0.54
CAPN1-201ENST00000279247 USP15Q9Y4E8 981 aaPredicted RBP18.4■□□□□ 0.54
CAPN1-201ENST00000279247 PRPF4O43172 522 aaKnown RBP eCLIP18.4■□□□□ 0.542e-6■■■□□ 17.7
CAPN1-201ENST00000279247 ERVK-10P10266 1014 aa18.4■□□□□ 0.54
CAPN1-201ENST00000279247 CCR1P32246 355 aa18.4■□□□□ 0.54
CAPN1-201ENST00000279247 GARSP41250 739 aaKnown RBP18.4■□□□□ 0.54
CAPN1-201ENST00000279247 CDHR3Q6ZTQ4 885 aa18.4■□□□□ 0.54
CAPN1-201ENST00000279247 C14orf80Q86SX3 495 aa18.4■□□□□ 0.54
CAPN1-201ENST00000279247 SPATS2Q86XZ4 545 aaKnown RBP18.4■□□□□ 0.54
CAPN1-201ENST00000279247 SPATA22Q8NHS9 363 aa18.4■□□□□ 0.54
CAPN1-201ENST00000279247 PHTF1Q9UMS5 762 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms