RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 NDST3O95803 873 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 OPN1MWP04001 364 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 PRKCBP05771 671 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 LPLP06858 475 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 OPN1MW2P0DN77 364 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 OPN1MW3P0DN78 364 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 C6P13671 934 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 EN2P19622 333 aaPredicted RBP4.85□□□□□ -1.63
CD44-202ENST00000278385 CCNCP24863 283 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 STIP1P31948 543 aaKnown RBP4.85□□□□□ -1.63
CD44-202ENST00000278385 RFC1P35251 1148 aaPredicted RBP4.85□□□□□ -1.63
CD44-202ENST00000278385 EIF2DP41214 584 aaKnown RBP4.85□□□□□ -1.63
CD44-202ENST00000278385 MTHFRP42898 656 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 ETV4P43268 484 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 PIP4K2AP48426 406 aaPredicted RBP4.85□□□□□ -1.63
CD44-202ENST00000278385 RRADP55042 308 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 INHBEP58166 350 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 C21orf58P58505 322 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 STARD6P59095 220 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 RAC3P60763 192 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 IL13RA1P78552 427 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 HTD2P86397 168 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 CD83Q01151 205 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 MECOMQ03112 1051 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 YWHAHQ04917 246 aaPredicted RBP4.85□□□□□ -1.63
CD44-202ENST00000278385 GALNT2Q10471 571 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 NOGQ13253 232 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 SGCGQ13326 291 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 DGKDQ16760 1214 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 ALG11Q2TAA5 492 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 KBTBD12Q3ZCT8 623 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 BMP2KLQ5H9B9 411 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 C3orf38Q5JPI3 329 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 ATG16L1Q676U5 607 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 FSTL4Q6MZW2 842 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 MFSD5Q6N075 450 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 MTFR2Q6P444 385 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 KLHDC10Q6PID8 442 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 KIF6Q6ZMV9 814 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 ESPNLQ6ZVH7 1005 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 H1FNTQ75WM6 255 aaPredicted RBP4.85□□□□□ -1.63
CD44-202ENST00000278385 KIAA2013Q8IYS2 634 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 AOPEPQ8N6M6 819 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 CNBD1Q8NA66 436 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 GLIS1Q8NBF1 620 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 SEPT1Q8WYJ6 367 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 SHC3Q92529 594 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 ZNF653Q96CK0 615 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 CDCA5Q96FF9 252 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 MASTLQ96GX5 879 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 CLMNQ96JQ2 1002 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 FAM167AQ96KS9 214 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 SNX22Q96L94 193 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 C1orf74Q96LT6 269 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 P2RX7Q99572 595 aaKnown RBP4.85□□□□□ -1.63
CD44-202ENST00000278385 CITED2Q99967 270 aaPredicted RBP4.85□□□□□ -1.63
CD44-202ENST00000278385 REEP2Q9BRK0 252 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 THUMPD2Q9BTF0 503 aaKnown RBP4.85□□□□□ -1.63
CD44-202ENST00000278385 NYXQ9GZU5 481 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 ZCWPW1Q9H0M4 648 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 WNT8AQ9H1J5 351 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 C12orf65Q9H3J6 166 aaKnown RBP4.85□□□□□ -1.63
CD44-202ENST00000278385 SEMA4AQ9H3S1 761 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 NCOR1P1Q9H4R4 102 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 THAP9Q9H5L6 903 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 COQ3Q9NZJ6 369 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 CACNG4Q9UBN1 327 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 ZMAT5Q9UDW3 170 aaKnown RBP4.85□□□□□ -1.63
CD44-202ENST00000278385 DPP7Q9UHL4 492 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 CDC42EP3Q9UKI2 254 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 CFAP45Q9UL16 551 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 NIP7Q9Y221 180 aaKnown RBP eCLIP4.85□□□□□ -1.63
CD44-202ENST00000278385 FAM169AQ9Y6X4 670 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 CARMIL3Q8ND23 1372 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 ADAMTS7Q9UKP4 1686 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 UBR3Q6ZT12 1888 aa4.85□□□□□ -1.63
CD44-202ENST00000278385 ADAMTS20P59510 1910 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 TAF1LQ8IZX4 1826 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 CICQ96RK0 1608 aaPredicted RBP4.84□□□□□ -1.63
CD44-202ENST00000278385 ATP10DQ9P241 1426 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 ADCY9O60503 1353 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 MAP3K15Q6ZN16 1313 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 GPR75-ASB3A0A0A6YYF3 556 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 RGSL1A5PLK6 1076 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 CCDC169A6NNP5 214 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 H0YC42 278 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 UBXN8O00124 270 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 RIPK2O43353 540 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 ADAM20O43506 726 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 FOXD2O60548 495 aaPredicted RBP4.84□□□□□ -1.63
CD44-202ENST00000278385 SMPD2O60906 423 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 NOL3O60936 208 aaKnown RBP4.84□□□□□ -1.63
CD44-202ENST00000278385 TSC22D2O75157 780 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 ACTL6BO94805 426 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 MT-ND5P03915 603 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 PDHA1P08559 390 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 CNPP09543 421 aaKnown RBP4.84□□□□□ -1.63
CD44-202ENST00000278385 EIF2S2P20042 333 aaKnown RBP4.84□□□□□ -1.63
CD44-202ENST00000278385 TMOD1P28289 359 aa4.84□□□□□ -1.63
CD44-202ENST00000278385 ALDH1B1P30837 517 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms