RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 ALDH7A1P49419 539 aaKnown RBP15.74■□□□□ 0.11
SF3B4-201ENST00000271628 TLE2Q04725 743 aa15.74■□□□□ 0.11
SF3B4-201ENST00000271628 ZNF33AQ06730 810 aa15.74■□□□□ 0.11
SF3B4-201ENST00000271628 PPIDQ08752 370 aaKnown RBP15.74■□□□□ 0.11
SF3B4-201ENST00000271628 TMED2Q15363 201 aa15.74■□□□□ 0.11
SF3B4-201ENST00000271628 CYB5D1Q6P9G0 228 aa15.74■□□□□ 0.11
SF3B4-201ENST00000271628 DYDC1Q8WWB3 177 aa15.74■□□□□ 0.11
SF3B4-201ENST00000271628 SPATA17Q96L03 361 aa15.74■□□□□ 0.11
SF3B4-201ENST00000271628 VAT1Q99536 393 aa15.74■□□□□ 0.11
SF3B4-201ENST00000271628 ELAC2Q9BQ52 826 aaKnown RBP15.74■□□□□ 0.11
SF3B4-201ENST00000271628 NMUR1Q9HB89 426 aa15.74■□□□□ 0.11
SF3B4-201ENST00000271628 EIF2B3Q9NR50 452 aaKnown RBP15.74■□□□□ 0.11
SF3B4-201ENST00000271628 IGSF9Q9P2J2 1179 aa15.74■□□□□ 0.11
SF3B4-201ENST00000271628 SFMBT1Q9UHJ3 866 aa15.74■□□□□ 0.11
SF3B4-201ENST00000271628 FNDC1Q4ZHG4 1894 aaPredicted RBP15.74■□□□□ 0.11
SF3B4-201ENST00000271628 MYO16Q9Y6X6 1858 aa15.73■□□□□ 0.11
SF3B4-201ENST00000271628 TRDMT1O14717 391 aaKnown RBP15.73■□□□□ 0.11
SF3B4-201ENST00000271628 FGF10O15520 208 aaPredicted RBP15.73■□□□□ 0.11
SF3B4-201ENST00000271628 AVILO75366 819 aa15.73■□□□□ 0.11
SF3B4-201ENST00000271628 STX2P32856 288 aa15.73■□□□□ 0.11
SF3B4-201ENST00000271628 MAGEA3P43357 314 aa15.73■□□□□ 0.11
SF3B4-201ENST00000271628 ARPP19P56211 112 aa15.73■□□□□ 0.11
SF3B4-201ENST00000271628 MSANTD2Q6P1R3 559 aa15.73■□□□□ 0.11
SF3B4-201ENST00000271628 ADGRD1Q6QNK2 874 aa15.73■□□□□ 0.11
SF3B4-201ENST00000271628 DEFB128Q7Z7B8 93 aa15.73■□□□□ 0.11
SF3B4-201ENST00000271628 SRRM1Q8IYB3 904 aaKnown RBP15.73■□□□□ 0.11
SF3B4-201ENST00000271628 LZTR1Q8N653 840 aa15.73■□□□□ 0.11
SF3B4-201ENST00000271628 ATAD1Q8NBU5 361 aa15.73■□□□□ 0.11
SF3B4-201ENST00000271628 CATSPERBQ9H7T0 1116 aa15.73■□□□□ 0.11
SF3B4-201ENST00000271628 KCNK9Q9NPC2 374 aa15.73■□□□□ 0.11
SF3B4-201ENST00000271628 CLIC5Q9NZA1 410 aa15.73■□□□□ 0.11
SF3B4-201ENST00000271628 TLR6Q9Y2C9 796 aa15.73■□□□□ 0.11
SF3B4-201ENST00000271628 TMEM120BA0PK00 339 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 MTMR11A4FU01 709 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 NT5C1B-RDH14C9J2C7 533 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 SNX3O60493 162 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 KRT15P19012 456 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 YWHAQP27348 245 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 MSH2P43246 934 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 IFNAR2P48551 515 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 COG7P83436 770 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 GALNT2Q10471 571 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 WASHC5Q12768 1159 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 MTM1Q13496 603 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 TRIM60Q495X7 471 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 CNKSR3Q6P9H4 555 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 TRPM8Q7Z2W7 1104 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 PID1Q7Z2X4 250 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 TRABD2AQ86V40 505 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 PARP9Q8IXQ6 854 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 MAGEC3Q8TD91 643 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 SIK2Q9H0K1 926 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 OLA1Q9NTK5 396 aaKnown RBP15.72■□□□□ 0.11
SF3B4-201ENST00000271628 SEPT10Q9P0V9 454 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 ZC3H7BQ9UGR2 993 aaKnown RBP15.72■□□□□ 0.11
SF3B4-201ENST00000271628 TRHDEQ9UKU6 1024 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 SLC12A4Q9UP95 1085 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 PLXNA3P51805 1871 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 PAGE1O75459 146 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 SRGAP2BP0DMP2 458 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 GARSP41250 739 aaKnown RBP15.72■□□□□ 0.11
SF3B4-201ENST00000271628 MNX1P50219 401 aaPredicted RBP15.72■□□□□ 0.11
SF3B4-201ENST00000271628 RPL10AP62906 217 aaKnown RBP15.72■□□□□ 0.11
SF3B4-201ENST00000271628 NRG1Q02297 640 aaPredicted RBP15.72■□□□□ 0.11
SF3B4-201ENST00000271628 SNCBQ16143 134 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 MGAT5BQ3V5L5 792 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 RTP2Q5QGT7 225 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 RWDD4Q6NW29 188 aaKnown RBP15.72■□□□□ 0.11
SF3B4-201ENST00000271628 IGDCC3Q8IVU1 814 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 ZNF567Q8N184 647 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 B3GALT6Q96L58 329 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 C1orf74Q96LT6 269 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 CEP295NLQ96MC4 621 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 PAFAH2Q99487 392 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 PLCD4Q9BRC7 762 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 DHRS4Q9BTZ2 278 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 TLR8Q9NR97 1041 aaKnown RBP15.72■□□□□ 0.11
SF3B4-201ENST00000271628 IKBKGQ9Y6K9 419 aa15.72■□□□□ 0.11
SF3B4-201ENST00000271628 TCRBV9S1A1TA0A576 114 aa15.71■□□□□ 0.11
SF3B4-201ENST00000271628 HOXC13P31276 330 aa15.71■□□□□ 0.11
SF3B4-201ENST00000271628 RFC2P35250 354 aa15.71■□□□□ 0.11
SF3B4-201ENST00000271628 GPR15P49685 360 aa15.71■□□□□ 0.11
SF3B4-201ENST00000271628 PGFP49763 221 aa15.71■□□□□ 0.11
SF3B4-201ENST00000271628 SLC18A1P54219 525 aa15.71■□□□□ 0.11
SF3B4-201ENST00000271628 USP41Q3LFD5 358 aa15.71■□□□□ 0.11
SF3B4-201ENST00000271628 SDHAF4Q5VUM1 108 aa15.71■□□□□ 0.11
SF3B4-201ENST00000271628 LRRC8BQ6P9F7 803 aa15.71■□□□□ 0.11
SF3B4-201ENST00000271628 CCDC91Q7Z6B0 441 aa15.71■□□□□ 0.11
SF3B4-201ENST00000271628 CCNJLQ8IV13 435 aa15.71■□□□□ 0.11
SF3B4-201ENST00000271628 NPWQ8N729 165 aa15.71■□□□□ 0.11
SF3B4-201ENST00000271628 FBXO32Q969P5 355 aa15.71■□□□□ 0.11
SF3B4-201ENST00000271628 TBC1D31Q96DN5 1066 aa15.71■□□□□ 0.11
SF3B4-201ENST00000271628 FCRL2Q96LA5 508 aaPredicted RBP15.71■□□□□ 0.11
SF3B4-201ENST00000271628 SIGLEC10Q96LC7 697 aa15.71■□□□□ 0.11
SF3B4-201ENST00000271628 SMC6Q96SB8 1091 aa15.71■□□□□ 0.11
SF3B4-201ENST00000271628 HAUS2Q9NVX0 235 aa15.71■□□□□ 0.11
SF3B4-201ENST00000271628 OSER1Q9NX31 292 aa15.71■□□□□ 0.11
SF3B4-201ENST00000271628 NKIRAS1Q9NYS0 192 aa15.71■□□□□ 0.11
SF3B4-201ENST00000271628 KLHL8Q9P2G9 620 aaPredicted RBP15.71■□□□□ 0.11
SF3B4-201ENST00000271628 NR2E3Q9Y5X4 410 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms