RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 USP41Q3LFD5 358 aa13.56□□□□□ -0.24
SMG9-201ENST00000270066 FAM136AQ96C01 138 aa13.56□□□□□ -0.24
SMG9-201ENST00000270066 VPS50Q96JG6 964 aa13.56□□□□□ -0.24
SMG9-201ENST00000270066 SERAC1Q96JX3 654 aa13.56□□□□□ -0.24
SMG9-201ENST00000270066 ASTN1O14525 1302 aa13.56□□□□□ -0.24
SMG9-201ENST00000270066 STAU1O95793 577 aaKnown RBP13.56□□□□□ -0.24
SMG9-201ENST00000270066 DARSP14868 501 aaKnown RBP13.56□□□□□ -0.24
SMG9-201ENST00000270066 SERPINB5P36952 375 aa13.56□□□□□ -0.24
SMG9-201ENST00000270066 GRM5P41594 1212 aa13.56□□□□□ -0.24
SMG9-201ENST00000270066 PRKCIP41743 596 aa13.56□□□□□ -0.24
SMG9-201ENST00000270066 MEA1Q16626 185 aa13.56□□□□□ -0.24
SMG9-201ENST00000270066 DCLRE1AQ6PJP8 1040 aa13.56□□□□□ -0.24
SMG9-201ENST00000270066 KCNT2Q6UVM3 1135 aa13.56□□□□□ -0.24
SMG9-201ENST00000270066 USP45Q70EL2 814 aa13.56□□□□□ -0.24
SMG9-201ENST00000270066 SUSD6Q92537 303 aa13.56□□□□□ -0.24
SMG9-201ENST00000270066 ELMO3Q96BJ8 720 aa13.56□□□□□ -0.24
SMG9-201ENST00000270066 ASAH2Q9NR71 780 aa13.56□□□□□ -0.24
SMG9-201ENST00000270066 TISP43B9A030 160 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 ARHGEF9O43307 516 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 PPM1AP35813 382 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 TBX2Q13207 712 aaPredicted RBP13.55□□□□□ -0.24
SMG9-201ENST00000270066 FAM110CQ1W6H9 321 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 C16orf59Q7L2K0 433 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 P3H2Q8IVL5 708 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 HELQQ8TDG4 1101 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 CCT7Q99832 543 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 C2orf49Q9BVC5 232 aaPredicted RBP13.55□□□□□ -0.24
SMG9-201ENST00000270066 CEP41Q9BYV8 373 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 CAPN10Q9HC96 672 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 PDP2Q9P2J9 529 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 TMEM114B3SHH9 223 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 FGRP09769 529 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 TPH1P17752 444 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 DLG4P78352 724 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 NFYCQ13952 458 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 PARP6Q2NL67 630 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 FUT11Q495W5 492 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 TJAP1Q5JTD0 557 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 TREML2Q5T2D2 321 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 PALB2Q86YC2 1186 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 DIS3LQ8TF46 1054 aaKnown RBP13.55□□□□□ -0.24
SMG9-201ENST00000270066 FBXL21Q9UKT6 434 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 PNMA8BQ9ULN7 279 aaPredicted RBP13.55□□□□□ -0.24
SMG9-201ENST00000270066 MED1Q15648 1581 aaPredicted RBP13.55□□□□□ -0.24
SMG9-201ENST00000270066 ERI2A8K979 691 aaKnown RBP13.55□□□□□ -0.24
SMG9-201ENST00000270066 CCDC159P0C7I6 412 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 ACADSP16219 412 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 KDELR1P24390 212 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 ZCWPW2Q504Y3 356 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 CYP4Z1Q86W10 505 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 TRIM69Q86WT6 500 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 STK40Q8N2I9 435 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 B3GALNT2Q8NCR0 500 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 ETNPPLQ8TBG4 499 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 REPS1Q96D71 796 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 VPS51Q9UID3 782 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 SIK3Q9Y2K2 1263 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 DERAQ9Y315 318 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 MTA2O94776 668 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 UBOX5O94941 541 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 GUCA1CO95843 209 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 CTNNB1P35222 781 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 ATP6AP1LQ52LC2 224 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 EPS8L1Q8TE68 723 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 ST3GAL5Q9UNP4 418 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 PTCH2Q9Y6C5 1203 aa13.55□□□□□ -0.24
SMG9-201ENST00000270066 TMEM88BA6NKF7 163 aa13.54□□□□□ -0.24
SMG9-201ENST00000270066 FAM47E-STBD1D6RA91 191 aa13.54□□□□□ -0.24
SMG9-201ENST00000270066 RIPK2O43353 540 aa13.54□□□□□ -0.24
SMG9-201ENST00000270066 CCNT2O60583 730 aaKnown RBP13.54□□□□□ -0.24
SMG9-201ENST00000270066 RARAP10276 462 aa13.54□□□□□ -0.24
SMG9-201ENST00000270066 CDC25CP30307 473 aa13.54□□□□□ -0.24
SMG9-201ENST00000270066 MAPK8P45983 427 aa13.54□□□□□ -0.24
SMG9-201ENST00000270066 CSTF3Q12996 717 aaKnown RBP13.54□□□□□ -0.24
SMG9-201ENST00000270066 KRT78Q8N1N4 520 aa13.54□□□□□ -0.24
SMG9-201ENST00000270066 IL31RAQ8NI17 732 aa13.54□□□□□ -0.24
SMG9-201ENST00000270066 MCOLN3Q8TDD5 553 aa13.54□□□□□ -0.24
SMG9-201ENST00000270066 HTATIP2Q9BUP3 242 aa13.54□□□□□ -0.24
SMG9-201ENST00000270066 PDZK1P1A8MUH7 402 aa13.54□□□□□ -0.24
SMG9-201ENST00000270066 LYPLA2O95372 231 aa13.54□□□□□ -0.24
SMG9-201ENST00000270066 ADH1AP07327 375 aa13.54□□□□□ -0.24
SMG9-201ENST00000270066 RRM2P31350 389 aa13.54□□□□□ -0.24
SMG9-201ENST00000270066 ZNF143P52747 638 aaPredicted RBP13.54□□□□□ -0.24
SMG9-201ENST00000270066 BMPR2Q13873 1038 aa13.54□□□□□ -0.24
SMG9-201ENST00000270066 LRRC38Q5VT99 294 aa13.54□□□□□ -0.24
SMG9-201ENST00000270066 MOB2Q70IA6 237 aa13.54□□□□□ -0.24
SMG9-201ENST00000270066 DNAAF5Q86Y56 855 aa13.54□□□□□ -0.24
SMG9-201ENST00000270066 PURBQ96QR8 312 aaKnown RBP13.54□□□□□ -0.24
SMG9-201ENST00000270066 DDX20Q9UHI6 824 aaKnown RBP13.54□□□□□ -0.24
SMG9-201ENST00000270066 SMIM35A0A1B0GVV1 85 aa13.54□□□□□ -0.24
SMG9-201ENST00000270066 BMP10O95393 424 aa13.54□□□□□ -0.24
SMG9-201ENST00000270066 TRUB2O95900 331 aaKnown RBP13.54□□□□□ -0.24
SMG9-201ENST00000270066 ALBP02768 609 aa13.54□□□□□ -0.24
SMG9-201ENST00000270066 PLOD1Q02809 727 aaPredicted RBP13.54□□□□□ -0.24
SMG9-201ENST00000270066 PLD3Q8IV08 490 aa13.54□□□□□ -0.24
SMG9-201ENST00000270066 FBXO39Q8N4B4 442 aa13.54□□□□□ -0.24
SMG9-201ENST00000270066 DNAJC19Q96DA6 116 aa13.54□□□□□ -0.24
SMG9-201ENST00000270066 LRRC39Q96DD0 335 aa13.54□□□□□ -0.24
SMG9-201ENST00000270066 GLTPD2A6NH11 291 aa13.54□□□□□ -0.24
SMG9-201ENST00000270066 H3BMM5 538 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms