RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 AHCYL1O43865 530 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 SNUPNO95149 360 aaKnown RBP17.24■□□□□ 0.35
SQLE-201ENST00000265896 MT-CO1P00395 513 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 JUNP05412 331 aaKnown RBP17.24■□□□□ 0.35
SQLE-201ENST00000265896 P4HA1P13674 534 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 ITGAXP20702 1163 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 NUDT2P50583 147 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 RAB27AP51159 221 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 MRPS22P82650 360 aaKnown RBP17.24■□□□□ 0.35
SQLE-201ENST00000265896 RBP5P82980 135 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 ITGA7Q13683 1181 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 TTLL12Q14166 644 aaPredicted RBP17.24■□□□□ 0.35
SQLE-201ENST00000265896 PDK2Q15119 407 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 MMEL1Q495T6 779 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 DNAL1Q4LDG9 190 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 FAM72AQ5TYM5 149 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 FAM72DQ6L9T8 149 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 STRA8Q7Z7C7 330 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 DHDDSQ86SQ9 333 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 FAM72BQ86X60 149 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 CDKL3Q8IVW4 592 aaPredicted RBP17.24■□□□□ 0.35
SQLE-201ENST00000265896 DEFB106AQ8N104 65 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 AFG1LQ8WV93 481 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 IFT43Q96FT9 208 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 ANKRD27Q96NW4 1050 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 LENG8Q96PV6 779 aaPredicted RBP17.24■□□□□ 0.35
SQLE-201ENST00000265896 APPL1Q9UKG1 709 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 NUP205Q92621 2012 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 TK2O00142 265 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 C22orf31O95567 290 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 TGM2P21980 687 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 MPSTP25325 297 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 GRM1Q13255 1194 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 CNPY1Q3B7I2 92 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 FBXL19Q6PCT2 694 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 ZSCAN18Q8TBC5 510 aaPredicted RBP17.24■□□□□ 0.35
SQLE-201ENST00000265896 OMDQ99983 421 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 NUF2Q9BZD4 464 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 PNPLA8Q9NP80 782 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 SNX15Q9NRS6 342 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 MOCS1Q9NZB8 636 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 ZNF180Q9UJW8 692 aa17.24■□□□□ 0.35
SQLE-201ENST00000265896 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.23■□□□□ 0.35
SQLE-201ENST00000265896 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.23■□□□□ 0.35
SQLE-201ENST00000265896 TRDMT1O14717 391 aaKnown RBP17.23■□□□□ 0.35
SQLE-201ENST00000265896 BEST1O76090 585 aa17.23■□□□□ 0.35
SQLE-201ENST00000265896 SYPL2Q5VXT5 272 aa17.23■□□□□ 0.35
SQLE-201ENST00000265896 TRIM42Q8IWZ5 723 aa17.23■□□□□ 0.35
SQLE-201ENST00000265896 PIP4K2CQ8TBX8 421 aa17.23■□□□□ 0.35
SQLE-201ENST00000265896 ATP2A3Q93084 1043 aa17.23■□□□□ 0.35
SQLE-201ENST00000265896 IGKV6-21A0A0C4DH24 114 aa17.23■□□□□ 0.35
SQLE-201ENST00000265896 TMEM233B4DJY2 109 aa17.23■□□□□ 0.35
SQLE-201ENST00000265896 USP2O75604 605 aaPredicted RBP17.23■□□□□ 0.35
SQLE-201ENST00000265896 IL18RAPO95256 599 aa17.23■□□□□ 0.35
SQLE-201ENST00000265896 SULT1E1P49888 294 aa17.23■□□□□ 0.35
SQLE-201ENST00000265896 WASHC5Q12768 1159 aa17.23■□□□□ 0.35
SQLE-201ENST00000265896 HFE2Q6ZVN8 426 aa17.23■□□□□ 0.35
SQLE-201ENST00000265896 SLC35F5Q8WV83 523 aa17.23■□□□□ 0.35
SQLE-201ENST00000265896 FAM167AQ96KS9 214 aa17.23■□□□□ 0.35
SQLE-201ENST00000265896 PHF12Q96QT6 1004 aa17.23■□□□□ 0.35
SQLE-201ENST00000265896 NXF3Q9H4D5 531 aaKnown RBP17.23■□□□□ 0.35
SQLE-201ENST00000265896 KLHL8Q9P2G9 620 aaPredicted RBP17.23■□□□□ 0.35
SQLE-201ENST00000265896 COPG2Q9UBF2 871 aa17.23■□□□□ 0.35
SQLE-201ENST00000265896 PHIPQ8WWQ0 1821 aa17.23■□□□□ 0.35
SQLE-201ENST00000265896 PEX1O43933 1283 aa17.22■□□□□ 0.35
SQLE-201ENST00000265896 ENO3P13929 434 aaPredicted RBP17.22■□□□□ 0.35
SQLE-201ENST00000265896 CPA3P15088 417 aa17.22■□□□□ 0.35
SQLE-201ENST00000265896 ADIGQ0VDE8 80 aa17.22■□□□□ 0.35
SQLE-201ENST00000265896 RBBP5Q15291 538 aaKnown RBP17.22■□□□□ 0.35
SQLE-201ENST00000265896 IYDQ6PHW0 289 aa17.22■□□□□ 0.35
SQLE-201ENST00000265896 GALNT15Q8N3T1 639 aa17.22■□□□□ 0.35
SQLE-201ENST00000265896 CHRAC1Q9NRG0 131 aa17.22■□□□□ 0.35
SQLE-201ENST00000265896 ZNF112Q9UJU3 913 aa17.22■□□□□ 0.35
SQLE-201ENST00000265896 SLC39A10Q9ULF5 831 aa17.22■□□□□ 0.35
SQLE-201ENST00000265896 A0A1B0GTW7 788 aa17.22■□□□□ 0.35
SQLE-201ENST00000265896 CYP2C8P10632 490 aa17.22■□□□□ 0.35
SQLE-201ENST00000265896 PDCD2Q16342 344 aaPredicted RBP17.22■□□□□ 0.35
SQLE-201ENST00000265896 ZNF567Q8N184 647 aa17.22■□□□□ 0.35
SQLE-201ENST00000265896 CELF6Q96J87 481 aaKnown RBP17.22■□□□□ 0.35
SQLE-201ENST00000265896 CATSPER2Q96P56 530 aa17.22■□□□□ 0.35
SQLE-201ENST00000265896 RPL26L1Q9UNX3 145 aaKnown RBP17.22■□□□□ 0.35
SQLE-201ENST00000265896 TIMM13Q9Y5L4 95 aaPredicted RBP17.22■□□□□ 0.35
SQLE-201ENST00000265896 TRPA1O75762 1119 aa17.22■□□□□ 0.35
SQLE-201ENST00000265896 TKTP29401 623 aaKnown RBP17.22■□□□□ 0.35
SQLE-201ENST00000265896 ABCE1P61221 599 aaKnown RBP17.22■□□□□ 0.35
SQLE-201ENST00000265896 ZNF280DQ6N043 979 aa17.22■□□□□ 0.35
SQLE-201ENST00000265896 SDCCAG8Q86SQ7 713 aaPredicted RBP17.22■□□□□ 0.35
SQLE-201ENST00000265896 SNX32Q86XE0 403 aa17.22■□□□□ 0.35
SQLE-201ENST00000265896 C12orf42Q96LP6 360 aa17.22■□□□□ 0.35
SQLE-201ENST00000265896 PRMT7Q9NVM4 692 aaPredicted RBP17.22■□□□□ 0.35
SQLE-201ENST00000265896 RLFQ13129 1914 aa17.21■□□□□ 0.35
SQLE-201ENST00000265896 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.21■□□□□ 0.35
SQLE-201ENST00000265896 SPTLC1O15269 473 aa17.21■□□□□ 0.35
SQLE-201ENST00000265896 SERPINE1P05121 402 aa17.21■□□□□ 0.35
SQLE-201ENST00000265896 SOX11P35716 441 aa17.21■□□□□ 0.35
SQLE-201ENST00000265896 ARL4AP40617 200 aa17.21■□□□□ 0.35
SQLE-201ENST00000265896 MED21Q13503 144 aa17.21■□□□□ 0.35
SQLE-201ENST00000265896 KCTD2Q14681 263 aa17.21■□□□□ 0.35
SQLE-201ENST00000265896 FSTL4Q6MZW2 842 aa17.21■□□□□ 0.35
SQLE-201ENST00000265896 RNF169Q8NCN4 708 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms