RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 PQLC3Q8N755 202 aa12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 SNRNP27Q8WVK2 155 aaKnown RBP12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 CPNE1Q99829 537 aa12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 MRPL4Q9BYD3 311 aaKnown RBP12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 PNPLA3Q9NST1 481 aa12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 MRGBPQ9NV56 204 aa12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 WDR27A2RRH5 827 aa12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 TRIM13O60858 407 aa12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 METTL18O95568 372 aa12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 MPOP05164 745 aa12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 PPARGP37231 505 aaPredicted RBP12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 TFAMQ00059 246 aaKnown RBP12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 CDKL1Q00532 357 aa12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 CYTH1Q15438 398 aa12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 ZNF667Q5HYK9 610 aa12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 KRT80Q6KB66 452 aa12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 CYP4V2Q6ZWL3 525 aaPredicted RBP12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 CHERPQ8IWX8 916 aaKnown RBP12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 LILRA2Q8N149 483 aa12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 CNTD1Q8N815 330 aa12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 TOP1MTQ969P6 601 aa12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 ZNF597Q96LX8 424 aa12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 RNPEPQ9H4A4 650 aa12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 WDR41Q9HAD4 459 aa12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 TUBA8Q9NY65 449 aaPredicted RBP12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 IGSF9Q9P2J2 1179 aa12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 VTI1BQ9UEU0 232 aa12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 PCDHGB4Q9UN71 923 aa12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 SLC8A2Q9UPR5 921 aa12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 PCDHGB5Q9Y5G0 923 aa12.69□□□□□ -0.38
CHMP2B-201ENST00000263780 LY75O60449 1722 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 TMEM221A6NGB7 291 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 HDAC3O15379 428 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 MICAL2O94851 1124 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 BMP10O95393 424 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 APOA4P06727 396 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 SUPT20HL2P0C7V6 817 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 P4HA1P13674 534 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 IL4RP24394 825 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 PTPN11Q06124 597 aaPredicted RBP12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 STILQ15468 1287 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 SUPT20HL1Q3ZLR7 823 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 SEZ6Q53EL9 994 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 RWDD4Q6NW29 188 aaKnown RBP12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 ZNF781Q8N8C0 355 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 TMEM102Q8N9M5 508 aaPredicted RBP12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 PCDH19Q8TAB3 1148 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 RMND5BQ96G75 393 aaPredicted RBP12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 XYLT2Q9H1B5 865 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 MAN1C1Q9NR34 630 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 TBC1D23Q9NUY8 699 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 NXF1Q9UBU9 619 aaKnown RBP12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 NRXN2Q9P2S2 1712 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 H3BNH8 94 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 TRIM38O00635 465 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 DPYSL4O14531 572 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 CFLARO15519 480 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 CLASP2O75122 1294 aaKnown RBP12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 OATP04181 439 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 PRKCGP05129 697 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 C8BP07358 591 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 SPRP35270 261 aaPredicted RBP12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 GK3PQ14409 553 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 MGAT5BQ3V5L5 792 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 SEL1L3Q68CR1 1132 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 SCYL2Q6P3W7 929 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 ISL2Q96A47 359 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 HSPBAP1Q96EW2 488 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 EFHD1Q9BUP0 239 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 EIF2B3Q9NR50 452 aaKnown RBP12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 RAP2CQ9Y3L5 183 aa12.68□□□□□ -0.38
CHMP2B-201ENST00000263780 M0QYV0 167 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 MDM4O15151 490 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 VDRP11473 427 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 PORP16435 677 aaPredicted RBP12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 ZNF26P17031 533 aaPredicted RBP12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 ARRB2P32121 409 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 TNFSF9P41273 254 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 CEACAM7Q14002 265 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 PPP2R5DQ14738 602 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 SLC27A3Q5K4L6 730 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 HEATR6Q6AI08 1181 aaKnown RBP12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 OR6B2Q6IFH4 312 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 TERB1Q8NA31 727 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 RIN3Q8TB24 985 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 RCN3Q96D15 328 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 SLC4A5Q9BY07 1137 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 ZNF341Q9BYN7 854 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 BCO2Q9BYV7 579 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 CLK4Q9HAZ1 481 aaKnown RBP12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 AP4S1Q9Y587 144 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 SPDYE16A6NNV3 312 aaPredicted RBP12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 HACD1B0YJ81 288 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 MATN2O00339 956 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 POLBP06746 335 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 ENO3P13929 434 aaPredicted RBP12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 PSMD7P51665 324 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 PHEXP78562 749 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 SP4Q02446 784 aa12.67□□□□□ -0.38
CHMP2B-201ENST00000263780 CCDC14Q49A88 953 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms