RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 ZNF534Q76KX8 674 aa14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 DNAAF3Q8N9W5 541 aa14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 ZNF778Q96MU6 729 aa14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 PRMT7Q9NVM4 692 aaPredicted RBP14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 MORF4L1Q9UBU8 362 aa14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 MRPL42Q9Y6G3 142 aaKnown RBP14.87□□□□□ -0.03
SFSWAP-201ENST00000261674 A0A088AWK7 358 aa14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 FAM159BA6NKW6 160 aa14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 STRNO43815 780 aa14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 ATP9BO43861 1147 aa14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 AHCYL1O43865 530 aa14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 MYL3P08590 195 aa14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 TGFB3P10600 412 aa14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 CHRM1P11229 460 aaPredicted RBP14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 PROZP22891 400 aa14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 ARL4AP40617 200 aa14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 SERPINB9P50453 376 aa14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 NME3Q13232 169 aa14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 OLFML1Q6UWY5 402 aa14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 PACS1Q6VY07 963 aa14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 TP53INP2Q8IXH6 220 aa14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 PHTF2Q8N3S3 785 aa14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 HTR3CQ8WXA8 447 aa14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 GATA6Q92908 595 aa14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 UNKQ9C0B0 810 aaKnown RBP14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 CAB39LQ9H9S4 337 aa14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 CYP3A43Q9HB55 503 aa14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 SETD4Q9NVD3 440 aa14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 DTLQ9NZJ0 730 aa14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 RANBP2P49792 3224 aaKnown RBP14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 SDR42E2A6NKP2 422 aa14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 HSPA4LO95757 839 aa14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 RALBP11234 206 aa14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 PSMB4P28070 264 aa14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 L1CAMP32004 1257 aa14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 SERPINB5P36952 375 aa14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 STILQ15468 1287 aa14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 DLG2Q15700 870 aa14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 PDPK2PQ6A1A2 396 aa14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 PLA2G4CQ9UP65 541 aa14.86□□□□□ -0.03
SFSWAP-201ENST00000261674 CCDC160A6NGH7 325 aa14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 CA12O43570 354 aa14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 APLP1P51693 650 aa14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 WASHC5Q12768 1159 aa14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 SOWAHAQ2M3V2 549 aa14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 SDCCAG8Q86SQ7 713 aaPredicted RBP14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 TFB1MQ8WVM0 346 aaKnown RBP14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 CSPG4P5Q96PW8 444 aa14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 FRMD8Q9BZ67 464 aaPredicted RBP14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 SMARCAD1Q9H4L7 1026 aa14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 PDZD7Q9H5P4 517 aa14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 MYADML2A6NDP7 307 aa14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 HBP1O60381 514 aa14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 PLIN3O60664 434 aa14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 RNASEH1O60930 286 aaKnown RBP14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 SNNO75324 88 aaPredicted RBP14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 ITGA2BP08514 1039 aa14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 PEX2P28328 305 aa14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 NOGQ13253 232 aa14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 DCAF6Q58WW2 860 aa14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 NXNQ6DKJ4 435 aa14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 MYLK4Q86YV6 388 aaPredicted RBP14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 C18orf25Q96B23 403 aaPredicted RBP14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 KCTD15Q96SI1 283 aaPredicted RBP14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 SYBUQ9NX95 663 aa14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 ARID2Q68CP9 1835 aa14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 F8W8V4 182 aa14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 RNF103O00237 685 aa14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 FGF3P11487 239 aaPredicted RBP14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 RABGGTBP53611 331 aa14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 SLC9A4Q6AI14 798 aa14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 ATG14Q6ZNE5 492 aa14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 ADAM32Q8TC27 787 aa14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 LRRC39Q96DD0 335 aa14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 SNTG2Q9NY99 539 aa14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 UBP1Q9NZI7 540 aa14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 KLK14Q9P0G3 267 aa14.85□□□□□ -0.03
SFSWAP-201ENST00000261674 SNUPNO95149 360 aaKnown RBP14.84□□□□□ -0.03
SFSWAP-201ENST00000261674 VAV1P15498 845 aa14.84□□□□□ -0.03
SFSWAP-201ENST00000261674 PITX1P78337 314 aaPredicted RBP14.84□□□□□ -0.03
SFSWAP-201ENST00000261674 ARHGAP1Q07960 439 aa14.84□□□□□ -0.03
SFSWAP-201ENST00000261674 MED21Q13503 144 aa14.84□□□□□ -0.03
SFSWAP-201ENST00000261674 KIZQ2M2Z5 673 aa14.84□□□□□ -0.03
SFSWAP-201ENST00000261674 MMEL1Q495T6 779 aa14.84□□□□□ -0.03
SFSWAP-201ENST00000261674 SFT2D3Q587I9 215 aa14.84□□□□□ -0.03
SFSWAP-201ENST00000261674 MBLAC2Q68D91 279 aa14.84□□□□□ -0.03
SFSWAP-201ENST00000261674 GDPD5Q8WTR4 605 aa14.84□□□□□ -0.03
SFSWAP-201ENST00000261674 TRIB2Q92519 343 aa14.84□□□□□ -0.03
SFSWAP-201ENST00000261674 KHSRPQ92945 711 aaKnown RBP eCLIP14.84□□□□□ -0.035e-9■■□□□ 13.4
SFSWAP-201ENST00000261674 ZNF669Q96BR6 464 aaPredicted RBP14.84□□□□□ -0.03
SFSWAP-201ENST00000261674 TBCBQ99426 244 aa14.84□□□□□ -0.03
SFSWAP-201ENST00000261674 S100A14Q9HCY8 104 aa14.84□□□□□ -0.03
SFSWAP-201ENST00000261674 EMCNQ9ULC0 261 aa14.84□□□□□ -0.03
SFSWAP-201ENST00000261674 A0A1B0GVG6 124 aa14.84□□□□□ -0.03
SFSWAP-201ENST00000261674 GLRA3O75311 464 aa14.84□□□□□ -0.03
SFSWAP-201ENST00000261674 GABBR2O75899 941 aa14.84□□□□□ -0.03
SFSWAP-201ENST00000261674 KLHL2O95198 593 aa14.84□□□□□ -0.03
SFSWAP-201ENST00000261674 CD1EP15812 388 aa14.84□□□□□ -0.03
SFSWAP-201ENST00000261674 RAG1P15918 1043 aa14.84□□□□□ -0.03
SFSWAP-201ENST00000261674 TPH1P17752 444 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms