RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 CHRNB3Q05901 458 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 FSTL1Q12841 308 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 IER5Q5VY09 327 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 TAF2Q6P1X5 1199 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 MICALL2Q8IY33 904 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 TNIP3Q96KP6 325 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 LENG8Q96PV6 779 aaPredicted RBP16.57■□□□□ 0.24
SREBF1-201ENST00000261646 CIB1Q99828 191 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 TEX13BQ9BXU2 312 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 DGCR6LQ9BY27 220 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 STN1Q9H668 368 aaKnown RBP16.57■□□□□ 0.24
SREBF1-201ENST00000261646 NOL6Q9H6R4 1146 aaKnown RBP16.57■□□□□ 0.24
SREBF1-201ENST00000261646 AAASQ9NRG9 546 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 SCN3BQ9NY72 215 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 ATP6V1B2P21281 511 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 SHCBP1Q8NEM2 672 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 AKT1S1Q96B36 256 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 RNF157Q96PX1 679 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 PANX3Q96QZ0 392 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 ASPSCR1Q9BZE9 553 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 GPRC5DQ9NZD1 345 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 PRPF19Q9UMS4 504 aaKnown RBP16.56■□□□□ 0.24
SREBF1-201ENST00000261646 MYH15Q9Y2K3 1946 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 LINC00854A0A1B0GVQ3 168 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 RNF103O00237 685 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 CDH3P22223 829 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 DEFA1P59665 94 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 DEFA3P59666 94 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 NADK2Q4G0N4 442 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 MAGEE2Q8TD90 523 aaPredicted RBP16.56■□□□□ 0.24
SREBF1-201ENST00000261646 OSBPL11Q9BXB4 747 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 CLK4Q9HAZ1 481 aaKnown RBP16.56■□□□□ 0.24
SREBF1-201ENST00000261646 PIM2Q9P1W9 311 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 TSPAN16Q9UKR8 245 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 MYH7BA7E2Y1 1941 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 BAZ2AQ9UIF9 1905 aaKnown RBP16.56■□□□□ 0.24
SREBF1-201ENST00000261646 CXCL8P10145 99 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 CLK2P49760 499 aaKnown RBP16.56■□□□□ 0.24
SREBF1-201ENST00000261646 MOGSQ13724 837 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 UNC5AQ6ZN44 842 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 MON1BQ7L1V2 547 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 STK32CQ86UX6 486 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 C12orf56Q8IXR9 622 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 RP9Q8TA86 221 aaKnown RBP16.56■□□□□ 0.24
SREBF1-201ENST00000261646 ABHD8Q96I13 439 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 CPNE1Q99829 537 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 THUMPD3Q9BV44 507 aaKnown RBP16.56■□□□□ 0.24
SREBF1-201ENST00000261646 DEFB129Q9H1M3 183 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 PTPRHQ9HD43 1115 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 E5RJQ4 531 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 MPOP05164 745 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 HOXA10P31260 410 aaPredicted RBP16.56■□□□□ 0.24
SREBF1-201ENST00000261646 CA8P35219 290 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 PTP4A2Q12974 167 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 TMC5Q6UXY8 1006 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 KCNMB4Q86W47 210 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 MKL1Q969V6 931 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 APBA2Q99767 749 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 GIMAP4Q9NUV9 329 aa16.56■□□□□ 0.24
SREBF1-201ENST00000261646 PSMD12O00232 456 aaPredicted RBP16.55■□□□□ 0.24
SREBF1-201ENST00000261646 OR6B1O95007 311 aa16.55■□□□□ 0.24
SREBF1-201ENST00000261646 LDLRP01130 860 aa16.55■□□□□ 0.24
SREBF1-201ENST00000261646 GNAZP19086 355 aa16.55■□□□□ 0.24
SREBF1-201ENST00000261646 LRPAP1P30533 357 aa16.55■□□□□ 0.24
SREBF1-201ENST00000261646 TTKP33981 857 aa16.55■□□□□ 0.24
SREBF1-201ENST00000261646 GDF10P55107 478 aa16.55■□□□□ 0.24
SREBF1-201ENST00000261646 ARL10Q8N8L6 244 aa16.55■□□□□ 0.24
SREBF1-201ENST00000261646 OTUD5Q96G74 571 aa16.55■□□□□ 0.24
SREBF1-201ENST00000261646 C9orf16Q9BUW7 83 aa16.55■□□□□ 0.24
SREBF1-201ENST00000261646 TXLNGYQ9BZA5 131 aa16.55■□□□□ 0.24
SREBF1-201ENST00000261646 UBE2OQ9C0C9 1292 aaKnown RBP16.55■□□□□ 0.24
SREBF1-201ENST00000261646 KIF1AQ12756 1690 aa16.55■□□□□ 0.24
SREBF1-201ENST00000261646 MICAL2O94851 1124 aa16.55■□□□□ 0.24
SREBF1-201ENST00000261646 CCDC166P0CW27 439 aa16.55■□□□□ 0.24
SREBF1-201ENST00000261646 CCNA1P78396 465 aa16.55■□□□□ 0.24
SREBF1-201ENST00000261646 GTF2H3Q13889 308 aa16.55■□□□□ 0.24
SREBF1-201ENST00000261646 UTS2BQ765I0 119 aa16.55■□□□□ 0.24
SREBF1-201ENST00000261646 ERO1BQ86YB8 467 aa16.55■□□□□ 0.24
SREBF1-201ENST00000261646 ATPAF2Q8N5M1 289 aa16.55■□□□□ 0.24
SREBF1-201ENST00000261646 ACMSDQ8TDX5 336 aa16.55■□□□□ 0.24
SREBF1-201ENST00000261646 EXOSC4Q9NPD3 245 aaKnown RBP16.55■□□□□ 0.24
SREBF1-201ENST00000261646 ZC4H2Q9NQZ6 224 aa16.55■□□□□ 0.24
SREBF1-201ENST00000261646 NOD1Q9Y239 953 aa16.55■□□□□ 0.24
SREBF1-201ENST00000261646 TRIM38O00635 465 aa16.55■□□□□ 0.24
SREBF1-201ENST00000261646 TMEM63AO94886 807 aa16.55■□□□□ 0.24
SREBF1-201ENST00000261646 PARNO95453 639 aaKnown RBP16.55■□□□□ 0.24
SREBF1-201ENST00000261646 CRHR1P34998 444 aa16.55■□□□□ 0.24
SREBF1-201ENST00000261646 RNF145Q96MT1 663 aa16.55■□□□□ 0.24
SREBF1-201ENST00000261646 TBCBQ99426 244 aa16.55■□□□□ 0.24
SREBF1-201ENST00000261646 NPAS2Q99743 824 aa16.55■□□□□ 0.24
SREBF1-201ENST00000261646 KANSL1LA0AUZ9 987 aa16.54■□□□□ 0.24
SREBF1-201ENST00000261646 E5RI56 91 aa16.54■□□□□ 0.24
SREBF1-201ENST00000261646 NRLP54845 237 aa16.54■□□□□ 0.24
SREBF1-201ENST00000261646 PRKD1Q15139 912 aaPredicted RBP16.54■□□□□ 0.24
SREBF1-201ENST00000261646 CCDC85BQ15834 202 aaPredicted RBP16.54■□□□□ 0.24
SREBF1-201ENST00000261646 MTX3Q5HYI7 312 aa16.54■□□□□ 0.24
SREBF1-201ENST00000261646 OLFML1Q6UWY5 402 aa16.54■□□□□ 0.24
SREBF1-201ENST00000261646 DSELQ8IZU8 1212 aa16.54■□□□□ 0.24
SREBF1-201ENST00000261646 FAM162AQ96A26 154 aa16.54■□□□□ 0.24
SREBF1-201ENST00000261646 MIPEPQ99797 713 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms