RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 RHBGQ9H310 441 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 FBXO44Q9H4M3 255 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 STMN3Q9NZ72 180 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 ARMCX1Q9P291 453 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 SHOC2Q9UQ13 582 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 PDE5AO76074 875 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 NUDT14O95848 222 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 PRLRP16471 622 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 FLT3P36888 993 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 TRIM71Q2Q1W2 868 aaKnown RBP12.34□□□□□ -0.43
COL8A1-201ENST00000261037 PRCCQ92733 491 aaPredicted RBP12.34□□□□□ -0.43
COL8A1-201ENST00000261037 VPS33AQ96AX1 596 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 SPACA7Q96KW9 195 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 WDR41Q9HAD4 459 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 SAE1Q9UBE0 346 aaPredicted RBP12.34□□□□□ -0.43
COL8A1-201ENST00000261037 POLG2Q9UHN1 485 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 AP4S1Q9Y587 144 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 A0A1B0GW55 424 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 ATP6V1G2O95670 118 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 ZSCAN5DPP0CG00 497 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 DUX4L2P0CJ85 424 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 DUX4L3P0CJ86 424 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 DUX4L4P0CJ87 422 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 DUX4L5P0CJ88 424 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 DUX4L6P0CJ89 424 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 DUX4L7P0CJ90 424 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 GRK2P25098 689 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 PTPN4P29074 926 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 NOS3P29474 1203 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 SKIV2L2P42285 1042 aaKnown RBP12.34□□□□□ -0.43
COL8A1-201ENST00000261037 FGD3Q5JSP0 725 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 PLEKHA7Q6IQ23 1121 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 DPP10Q8N608 796 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 UXS1Q8NBZ7 420 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 GDPD5Q8WTR4 605 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 HDAC7Q8WUI4 952 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 HDHD2Q9H0R4 259 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 RIBC2Q9H4K1 309 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 KLHL1Q9NR64 748 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 DUX4Q9UBX2 424 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 SLCO1B7G3V0H7 640 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 HS6ST1O60243 411 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 FAAP100Q0VG06 881 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 CCDC153Q494R4 210 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 CBWD6Q4V339 395 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 MILR1Q7Z6M3 343 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 PALB2Q86YC2 1186 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 SPATA20Q8TB22 786 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 ASZ1Q8WWH4 475 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 A1CFQ9NQ94 594 aaKnown RBP12.34□□□□□ -0.43
COL8A1-201ENST00000261037 DDX20Q9UHI6 824 aaKnown RBP12.34□□□□□ -0.43
COL8A1-201ENST00000261037 RAB27AP51159 221 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 SLC12A3P55017 1021 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 IFI35P80217 286 aaPredicted RBP12.34□□□□□ -0.43
COL8A1-201ENST00000261037 SLC6A3Q01959 620 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 TMEM119Q4V9L6 283 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 PPM1LQ5SGD2 360 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 CYP20A1Q6UW02 462 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 USP7Q93009 1102 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 CDCA5Q96FF9 252 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 APOPT1Q96IL0 206 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 KANSL3Q9P2N6 904 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 TNS2Q63HR2 1409 aa12.33□□□□□ -0.43
COL8A1-201ENST00000261037 A0A096LPK6 155 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 INPP4BO15327 924 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 NCAM2O15394 837 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 ATG7O95352 703 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 RAG1P15918 1043 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 FGFR3P22607 806 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 PSMA3P25788 255 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 CRADDP78560 199 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 COX10Q12887 443 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 EIF2B5Q13144 721 aaKnown RBP12.33□□□□□ -0.44
COL8A1-201ENST00000261037 NFE2Q16621 373 aaPredicted RBP12.33□□□□□ -0.44
COL8A1-201ENST00000261037 FIGNQ5HY92 759 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 GJC2Q5T442 439 aaPredicted RBP12.33□□□□□ -0.44
COL8A1-201ENST00000261037 SLC41A1Q8IVJ1 513 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 KYQ8NBH2 561 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 GRIN3AQ8TCU5 1115 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 SLC16A10Q8TF71 515 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 OXNAD1Q96HP4 312 aaPredicted RBP12.33□□□□□ -0.44
COL8A1-201ENST00000261037 NAT9Q9BTE0 207 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 RSPH9Q9H1X1 276 aaPredicted RBP12.33□□□□□ -0.44
COL8A1-201ENST00000261037 RXFP1Q9HBX9 757 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 SEMA4BQ9NPR2 832 aaPredicted RBP12.33□□□□□ -0.44
COL8A1-201ENST00000261037 SYBUQ9NX95 663 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 COL3A1P02461 1466 aaPredicted RBP12.33□□□□□ -0.44
COL8A1-201ENST00000261037 FAM220BPB1ANY3 271 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 CNOT3O75175 753 aaKnown RBP12.33□□□□□ -0.44
COL8A1-201ENST00000261037 IGSF6O95976 241 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 CLTBP09497 229 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 OR56A5P0C7T3 313 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 MIPP30301 263 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 KPNB1Q14974 876 aaKnown RBP12.33□□□□□ -0.44
COL8A1-201ENST00000261037 C16orf46Q6P387 395 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 CYP4Z2PQ8N1L4 340 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 PURBQ96QR8 312 aaKnown RBP12.33□□□□□ -0.44
COL8A1-201ENST00000261037 TBCDQ9BTW9 1192 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 LIMD1Q9UGP4 676 aa12.33□□□□□ -0.44
COL8A1-201ENST00000261037 MAGEB16A2A368 324 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms