RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 SH3BP5O60239 455 aa17.48■□□□□ 0.39
CGREF1-201ENST00000260595 LUC7L3O95232 432 aaKnown RBP17.48■□□□□ 0.39
CGREF1-201ENST00000260595 ASLP04424 464 aa17.48■□□□□ 0.39
CGREF1-201ENST00000260595 TACR2P21452 398 aa17.48■□□□□ 0.39
CGREF1-201ENST00000260595 USP8P40818 1118 aa17.48■□□□□ 0.39
CGREF1-201ENST00000260595 ARID5BQ14865 1188 aa17.48■□□□□ 0.39
CGREF1-201ENST00000260595 PITRM1Q5JRX3 1037 aa17.48■□□□□ 0.39
CGREF1-201ENST00000260595 RAP1GAP2Q684P5 730 aa17.48■□□□□ 0.39
CGREF1-201ENST00000260595 SMYD5Q6GMV2 418 aa17.48■□□□□ 0.39
CGREF1-201ENST00000260595 UNQ6494/PRO21346Q6UXR6 183 aa17.48■□□□□ 0.39
CGREF1-201ENST00000260595 LGI2Q8N0V4 545 aa17.48■□□□□ 0.39
CGREF1-201ENST00000260595 MLKLQ8NB16 471 aa17.48■□□□□ 0.39
CGREF1-201ENST00000260595 KDM1BQ8NB78 822 aa17.48■□□□□ 0.39
CGREF1-201ENST00000260595 BTN2A3PQ96KV6 586 aa17.48■□□□□ 0.39
CGREF1-201ENST00000260595 SLC2A13Q96QE2 648 aa17.48■□□□□ 0.39
CGREF1-201ENST00000260595 CPXM1Q96SM3 734 aa17.48■□□□□ 0.39
CGREF1-201ENST00000260595 PRMT1Q99873 361 aaKnown RBP17.48■□□□□ 0.39
CGREF1-201ENST00000260595 ADAM33Q9BZ11 813 aa17.48■□□□□ 0.39
CGREF1-201ENST00000260595 RSPH9Q9H1X1 276 aaPredicted RBP17.48■□□□□ 0.39
CGREF1-201ENST00000260595 IL21RQ9HBE5 538 aa17.48■□□□□ 0.39
CGREF1-201ENST00000260595 PCDHGC3Q9UN70 934 aa17.48■□□□□ 0.39
CGREF1-201ENST00000260595 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.48■□□□□ 0.39
CGREF1-201ENST00000260595 PCNX2A6NKB5 2137 aa17.47■□□□□ 0.39
CGREF1-201ENST00000260595 TYW5A2RUC4 315 aaKnown RBP17.47■□□□□ 0.39
CGREF1-201ENST00000260595 KCNU1A8MYU2 1149 aa17.47■□□□□ 0.39
CGREF1-201ENST00000260595 HYAL3O43820 417 aaPredicted RBP17.47■□□□□ 0.39
CGREF1-201ENST00000260595 APOEP02649 317 aa17.47■□□□□ 0.39
CGREF1-201ENST00000260595 CTSOP43234 321 aaPredicted RBP17.47■□□□□ 0.39
CGREF1-201ENST00000260595 CDH18Q13634 790 aa17.47■□□□□ 0.39
CGREF1-201ENST00000260595 HNRNPDQ14103 355 aaKnown RBP17.47■□□□□ 0.39
CGREF1-201ENST00000260595 HNRNPA1L2Q32P51 320 aaKnown RBP17.47■□□□□ 0.39
CGREF1-201ENST00000260595 ZNF776Q68DI1 518 aaPredicted RBP17.47■□□□□ 0.39
CGREF1-201ENST00000260595 DPY19L2P1Q6NXN4 242 aa17.47■□□□□ 0.39
CGREF1-201ENST00000260595 GATA6Q92908 595 aa17.47■□□□□ 0.39
CGREF1-201ENST00000260595 BTBD1Q9H0C5 482 aa17.47■□□□□ 0.39
CGREF1-201ENST00000260595 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.47■□□□□ 0.39
CGREF1-201ENST00000260595 ERVW-1Q9UQF0 538 aa17.47■□□□□ 0.39
CGREF1-201ENST00000260595 SIN3BO75182 1162 aa17.46■□□□□ 0.39
CGREF1-201ENST00000260595 SEMA4FO95754 770 aa17.46■□□□□ 0.39
CGREF1-201ENST00000260595 DNTTP04053 509 aa17.46■□□□□ 0.39
CGREF1-201ENST00000260595 GLI1P08151 1106 aa17.46■□□□□ 0.39
CGREF1-201ENST00000260595 CLCN1P35523 988 aa17.46■□□□□ 0.39
CGREF1-201ENST00000260595 ST8SIA6P61647 398 aa17.46■□□□□ 0.39
CGREF1-201ENST00000260595 C9orf64Q5T6V5 341 aa17.46■□□□□ 0.39
CGREF1-201ENST00000260595 CHSY1Q86X52 802 aa17.46■□□□□ 0.39
CGREF1-201ENST00000260595 APCDD1Q8J025 514 aa17.46■□□□□ 0.39
CGREF1-201ENST00000260595 DEFB106AQ8N104 65 aa17.46■□□□□ 0.39
CGREF1-201ENST00000260595 BIRC7Q96CA5 298 aa17.46■□□□□ 0.39
CGREF1-201ENST00000260595 PPP1R13BQ96KQ4 1090 aa17.46■□□□□ 0.39
CGREF1-201ENST00000260595 ORAI3Q9BRQ5 295 aa17.46■□□□□ 0.39
CGREF1-201ENST00000260595 OSGEPQ9NPF4 335 aa17.46■□□□□ 0.39
CGREF1-201ENST00000260595 ASNSD1Q9NWL6 643 aa17.46■□□□□ 0.39
CGREF1-201ENST00000260595 KIAA1522Q9P206 1035 aaPredicted RBP17.46■□□□□ 0.39
CGREF1-201ENST00000260595 DNAJC12Q9UKB3 198 aa17.46■□□□□ 0.39
CGREF1-201ENST00000260595 CACNA1EQ15878 2313 aa17.46■□□□□ 0.38
CGREF1-201ENST00000260595 USP24Q9UPU5 2620 aa17.45■□□□□ 0.38
CGREF1-201ENST00000260595 A0A1B0GVT2 93 aa17.45■□□□□ 0.38
CGREF1-201ENST00000260595 TTC34A8MYJ7 566 aa17.45■□□□□ 0.38
CGREF1-201ENST00000260595 H0Y626 953 aa17.45■□□□□ 0.38
CGREF1-201ENST00000260595 FOXN3O00409 490 aaPredicted RBP17.45■□□□□ 0.38
CGREF1-201ENST00000260595 CBFA2T3O75081 653 aa17.45■□□□□ 0.38
CGREF1-201ENST00000260595 SRPRAP08240 638 aaKnown RBP17.45■□□□□ 0.38
CGREF1-201ENST00000260595 ZNF883P0CG24 379 aa17.45■□□□□ 0.38
CGREF1-201ENST00000260595 MTIF2P46199 727 aaKnown RBP17.45■□□□□ 0.38
CGREF1-201ENST00000260595 CSNK1EP49674 416 aaKnown RBP17.45■□□□□ 0.38
CGREF1-201ENST00000260595 TRIP6Q15654 476 aaKnown RBP17.45■□□□□ 0.38
CGREF1-201ENST00000260595 HLA-BQ31612 363 aa17.45■□□□□ 0.38
CGREF1-201ENST00000260595 EFHC1Q5JVL4 640 aa17.45■□□□□ 0.38
CGREF1-201ENST00000260595 OLFML1Q6UWY5 402 aa17.45■□□□□ 0.38
CGREF1-201ENST00000260595 DBX2Q6ZNG2 339 aa17.45■□□□□ 0.38
CGREF1-201ENST00000260595 USP30Q70CQ3 517 aa17.45■□□□□ 0.38
CGREF1-201ENST00000260595 PASD1Q8IV76 773 aa17.45■□□□□ 0.38
CGREF1-201ENST00000260595 NAXDQ8IW45 347 aa17.45■□□□□ 0.38
CGREF1-201ENST00000260595 CCDC117Q8IWD4 279 aaPredicted RBP17.45■□□□□ 0.38
CGREF1-201ENST00000260595 DHX40Q8IX18 779 aaKnown RBP17.45■□□□□ 0.38
CGREF1-201ENST00000260595 ATP6V0D2Q8N8Y2 350 aa17.45■□□□□ 0.38
CGREF1-201ENST00000260595 KDF1Q8NAX2 398 aaPredicted RBP17.45■□□□□ 0.38
CGREF1-201ENST00000260595 PABPC3Q9H361 631 aaKnown RBP17.45■□□□□ 0.38
CGREF1-201ENST00000260595 CLSTN2Q9H4D0 955 aa17.45■□□□□ 0.38
CGREF1-201ENST00000260595 GAREM1Q9H706 876 aa17.45■□□□□ 0.38
CGREF1-201ENST00000260595 SGK2Q9HBY8 427 aa17.45■□□□□ 0.38
CGREF1-201ENST00000260595 CHMP5Q9NZZ3 219 aa17.45■□□□□ 0.38
CGREF1-201ENST00000260595 SERGEFQ9UGK8 458 aa17.45■□□□□ 0.38
CGREF1-201ENST00000260595 SLCO3A1Q9UIG8 710 aa17.45■□□□□ 0.38
CGREF1-201ENST00000260595 SCML1Q9UN30 329 aa17.45■□□□□ 0.38
CGREF1-201ENST00000260595 FNDC3AQ9Y2H6 1198 aaKnown RBP17.45■□□□□ 0.38
CGREF1-201ENST00000260595 NEUROG3Q9Y4Z2 214 aa17.45■□□□□ 0.38
CGREF1-201ENST00000260595 ITIH6Q6UXX5 1313 aa17.45■□□□□ 0.38
CGREF1-201ENST00000260595 FRYQ5TBA9 3013 aa17.45■□□□□ 0.38
CGREF1-201ENST00000260595 TARSL2A2RTX5 802 aaKnown RBP17.44■□□□□ 0.38
CGREF1-201ENST00000260595 FAM221BA6H8Z2 402 aa17.44■□□□□ 0.38
CGREF1-201ENST00000260595 C10orf142B7Z368 130 aa17.44■□□□□ 0.38
CGREF1-201ENST00000260595 GRAP2O75791 330 aa17.44■□□□□ 0.38
CGREF1-201ENST00000260595 ERBB2P04626 1255 aa17.44■□□□□ 0.38
CGREF1-201ENST00000260595 PNMA6AP0CW24 399 aaPredicted RBP17.44■□□□□ 0.38
CGREF1-201ENST00000260595 MATKP42679 507 aa17.44■□□□□ 0.38
CGREF1-201ENST00000260595 CDK17Q00537 523 aa17.44■□□□□ 0.38
CGREF1-201ENST00000260595 ECT2LQ008S8 904 aa17.44■□□□□ 0.38
CGREF1-201ENST00000260595 PTK2Q05397 1052 aa17.44■□□□□ 0.38
CGREF1-201ENST00000260595 MAN2A1Q16706 1144 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms