RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 APAF1O14727 1248 aa5.61□□□□□ -1.51
TRA2B-201ENST00000259043 GABRB3P28472 473 aa5.61□□□□□ -1.51
TRA2B-201ENST00000259043 GALNSP34059 522 aa5.61□□□□□ -1.51
TRA2B-201ENST00000259043 NR4A2P43354 598 aa5.61□□□□□ -1.51
TRA2B-201ENST00000259043 NEK3P51956 506 aa5.61□□□□□ -1.51
TRA2B-201ENST00000259043 KCNJ12Q14500 433 aa5.61□□□□□ -1.51
TRA2B-201ENST00000259043 C10orf25Q5T742 122 aa5.61□□□□□ -1.51
TRA2B-201ENST00000259043 CRELD2Q6UXH1 353 aaPredicted RBP5.61□□□□□ -1.51
TRA2B-201ENST00000259043 ANKARQ7Z5J8 1434 aa5.61□□□□□ -1.51
TRA2B-201ENST00000259043 PIP4P1Q86T03 277 aa5.61□□□□□ -1.51
TRA2B-201ENST00000259043 PRSS3P2Q8NHM4 247 aa5.61□□□□□ -1.51
TRA2B-201ENST00000259043 C16orf52Q8NHV5 167 aa5.61□□□□□ -1.51
TRA2B-201ENST00000259043 LMO7Q8WWI1 1683 aa5.61□□□□□ -1.51
TRA2B-201ENST00000259043 KIAA0232Q92628 1395 aa5.61□□□□□ -1.51
TRA2B-201ENST00000259043 LRRC46Q96FV0 321 aa5.61□□□□□ -1.51
TRA2B-201ENST00000259043 TNIP3Q96KP6 325 aa5.61□□□□□ -1.51
TRA2B-201ENST00000259043 SIGLEC11Q96RL6 698 aa5.61□□□□□ -1.51
TRA2B-201ENST00000259043 ELAC2Q9BQ52 826 aaKnown RBP5.61□□□□□ -1.51
TRA2B-201ENST00000259043 SYT17Q9BSW7 474 aa5.61□□□□□ -1.51
TRA2B-201ENST00000259043 SHANK3Q9BYB0 1731 aa5.61□□□□□ -1.51
TRA2B-201ENST00000259043 TRNAU1APQ9NX07 287 aaKnown RBP5.61□□□□□ -1.51
TRA2B-201ENST00000259043 AFG3L2Q9Y4W6 797 aa5.61□□□□□ -1.51
TRA2B-201ENST00000259043 LRRC37A3O60309 1634 aa5.6□□□□□ -1.51
TRA2B-201ENST00000259043 SSH2Q76I76 1423 aa5.6□□□□□ -1.51
TRA2B-201ENST00000259043 OR2W5A6NFC9 320 aa5.6□□□□□ -1.51
TRA2B-201ENST00000259043 C16orf96A6NNT2 1141 aa5.6□□□□□ -1.51
TRA2B-201ENST00000259043 PMM2O15305 246 aa5.6□□□□□ -1.51
TRA2B-201ENST00000259043 RNF8O76064 485 aa5.6□□□□□ -1.51
TRA2B-201ENST00000259043 TMIGD3P0DMS9 266 aaPredicted RBP5.6□□□□□ -1.51
TRA2B-201ENST00000259043 SLC5A2P31639 672 aa5.6□□□□□ -1.51
TRA2B-201ENST00000259043 HTR3AP46098 478 aa5.6□□□□□ -1.51
TRA2B-201ENST00000259043 STT3AP46977 705 aa5.6□□□□□ -1.51
TRA2B-201ENST00000259043 GHRHRQ02643 423 aa5.6□□□□□ -1.51
TRA2B-201ENST00000259043 CCDC15Q0P6D6 951 aa5.6□□□□□ -1.51
TRA2B-201ENST00000259043 RABEP1Q15276 862 aa5.6□□□□□ -1.51
TRA2B-201ENST00000259043 ZRSR2Q15696 482 aaKnown RBP5.6□□□□□ -1.51
TRA2B-201ENST00000259043 FAM90A2PQ658T7 463 aa5.6□□□□□ -1.51
TRA2B-201ENST00000259043 DEF8Q6ZN54 512 aa5.6□□□□□ -1.51
TRA2B-201ENST00000259043 FAM71DQ8N9W8 422 aa5.6□□□□□ -1.51
TRA2B-201ENST00000259043 WIPF2Q8TF74 440 aaPredicted RBP5.6□□□□□ -1.51
TRA2B-201ENST00000259043 TBCBQ99426 244 aa5.6□□□□□ -1.51
TRA2B-201ENST00000259043 CINPQ9BW66 212 aaPredicted RBP5.6□□□□□ -1.51
TRA2B-201ENST00000259043 MLXIPLQ9NP71 852 aa5.6□□□□□ -1.51
TRA2B-201ENST00000259043 TOPAZ1Q8N9V7 1692 aa5.59□□□□□ -1.51
TRA2B-201ENST00000259043 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.59□□□□□ -1.51
TRA2B-201ENST00000259043 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.59□□□□□ -1.51
TRA2B-201ENST00000259043 IFRD1O00458 451 aaPredicted RBP5.59□□□□□ -1.51
TRA2B-201ENST00000259043 RRHO14718 337 aa5.59□□□□□ -1.51
TRA2B-201ENST00000259043 APOL1O14791 398 aa5.59□□□□□ -1.51
TRA2B-201ENST00000259043 CNOT3O75175 753 aaKnown RBP5.59□□□□□ -1.51
TRA2B-201ENST00000259043 FGBP02675 491 aa5.59□□□□□ -1.51
TRA2B-201ENST00000259043 CBSLP0DN79 551 aa5.59□□□□□ -1.51
TRA2B-201ENST00000259043 MYL4P12829 197 aa5.59□□□□□ -1.51
TRA2B-201ENST00000259043 CBSP35520 551 aa5.59□□□□□ -1.51
TRA2B-201ENST00000259043 RGS19P49795 217 aa5.59□□□□□ -1.51
TRA2B-201ENST00000259043 YPEL5P62699 121 aa5.59□□□□□ -1.51
TRA2B-201ENST00000259043 RAE1P78406 368 aaKnown RBP5.59□□□□□ -1.51
TRA2B-201ENST00000259043 SRSF1Q07955 248 aaKnown RBP eCLIP5.59□□□□□ -1.51
TRA2B-201ENST00000259043 GPS1Q13098 491 aa5.59□□□□□ -1.51
TRA2B-201ENST00000259043 LAMB3Q13751 1172 aa5.59□□□□□ -1.51
TRA2B-201ENST00000259043 RAP1GAP2Q684P5 730 aa5.59□□□□□ -1.51
TRA2B-201ENST00000259043 MRNIPQ6NTE8 343 aa5.59□□□□□ -1.51
TRA2B-201ENST00000259043 USP17L6PQ6QN14 398 aa5.59□□□□□ -1.51
TRA2B-201ENST00000259043 CCDC28AQ8IWP9 274 aa5.59□□□□□ -1.51
TRA2B-201ENST00000259043 CCDC33Q8N5R6 958 aa5.59□□□□□ -1.51
TRA2B-201ENST00000259043 ABHD5Q8WTS1 349 aa5.59□□□□□ -1.51
TRA2B-201ENST00000259043 P2RY11Q96G91 374 aa5.59□□□□□ -1.51
TRA2B-201ENST00000259043 PRAM1Q96QH2 718 aa5.59□□□□□ -1.51
TRA2B-201ENST00000259043 GATA5Q9BWX5 397 aaPredicted RBP5.59□□□□□ -1.51
TRA2B-201ENST00000259043 MAGEB5Q9BZ81 275 aa5.59□□□□□ -1.51
TRA2B-201ENST00000259043 RXFP3Q9NSD7 469 aa5.59□□□□□ -1.51
TRA2B-201ENST00000259043 MTMR4Q9NYA4 1195 aa5.59□□□□□ -1.51
TRA2B-201ENST00000259043 MAFFQ9ULX9 164 aa5.59□□□□□ -1.51
TRA2B-201ENST00000259043 ANKRD30BQ9BXX2 1392 aa5.58□□□□□ -1.52
TRA2B-201ENST00000259043 TLR2O60603 784 aa5.58□□□□□ -1.52
TRA2B-201ENST00000259043 COQ9O75208 318 aa5.58□□□□□ -1.52
TRA2B-201ENST00000259043 TM4SF4P48230 202 aa5.58□□□□□ -1.52
TRA2B-201ENST00000259043 DGKQP52824 942 aa5.58□□□□□ -1.52
TRA2B-201ENST00000259043 AK2P54819 239 aa5.58□□□□□ -1.52
TRA2B-201ENST00000259043 WDR5P61964 334 aaKnown RBP5.58□□□□□ -1.52
TRA2B-201ENST00000259043 KLHL22Q53GT1 634 aa5.58□□□□□ -1.52
TRA2B-201ENST00000259043 CC2D1BQ5T0F9 858 aaKnown RBP5.58□□□□□ -1.52
TRA2B-201ENST00000259043 FAXCQ5TGI0 409 aa5.58□□□□□ -1.52
TRA2B-201ENST00000259043 BEND5Q7L4P6 421 aa5.58□□□□□ -1.52
TRA2B-201ENST00000259043 TFAP2DQ7Z6R9 452 aa5.58□□□□□ -1.52
TRA2B-201ENST00000259043 UBE2Q1Q7Z7E8 422 aa5.58□□□□□ -1.52
TRA2B-201ENST00000259043 P3H2Q8IVL5 708 aa5.58□□□□□ -1.52
TRA2B-201ENST00000259043 NANOGP1Q8N7R0 232 aa5.58□□□□□ -1.52
TRA2B-201ENST00000259043 AGO4Q9HCK5 861 aaKnown RBP5.58□□□□□ -1.52
TRA2B-201ENST00000259043 STARD7Q9NQZ5 370 aa5.58□□□□□ -1.52
TRA2B-201ENST00000259043 TMEM184CQ9NVA4 438 aa5.58□□□□□ -1.52
TRA2B-201ENST00000259043 ZMYND8Q9ULU4 1186 aaPredicted RBP5.58□□□□□ -1.52
TRA2B-201ENST00000259043 PHTF1Q9UMS5 762 aa5.58□□□□□ -1.52
TRA2B-201ENST00000259043 ADGRB1O14514 1584 aa5.58□□□□□ -1.52
TRA2B-201ENST00000259043 TULP4Q9NRJ4 1543 aa5.58□□□□□ -1.52
TRA2B-201ENST00000259043 ATP7BP35670 1465 aa5.58□□□□□ -1.52
TRA2B-201ENST00000259043 DHX57Q6P158 1386 aaKnown RBP5.57□□□□□ -1.52
TRA2B-201ENST00000259043 MAP3K5Q99683 1374 aa5.57□□□□□ -1.52
TRA2B-201ENST00000259043 PAPPAQ13219 1627 aa5.57□□□□□ -1.52
TRA2B-201ENST00000259043 LY6G6EA0A0G2JKS1 128 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms