RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 PIH1D1Q9NWS0 290 aaKnown RBP8.89□□□□□ -0.99
PTCD3-201ENST00000254630 TMCO1Q9UM00 188 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 STARD13Q9Y3M8 1113 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 TMEM114B3SHH9 223 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 HMGCRP04035 888 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 MRPS15P82914 257 aaKnown RBP8.89□□□□□ -0.99
PTCD3-201ENST00000254630 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.89□□□□□ -0.99
PTCD3-201ENST00000254630 MMRN1Q13201 1228 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 ACAP1Q15027 740 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 ARHGAP17Q68EM7 881 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 PIK3R5Q8WYR1 880 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 FAM120BQ96EK7 910 aaKnown RBP8.89□□□□□ -0.99
PTCD3-201ENST00000254630 RNF208Q9H0X6 261 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 PRDM16Q9HAZ2 1276 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 E5RJQ4 531 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 CTNNB1P35222 781 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 SCNN1GP51170 649 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 IRAK1P51617 712 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 ZSWIM2Q8NEG5 633 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 C18orf25Q96B23 403 aaPredicted RBP8.89□□□□□ -0.99
PTCD3-201ENST00000254630 PHF21BQ96EK2 531 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 TINF2Q9BSI4 451 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 PRRG3Q9BZD7 231 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 STK39Q9UEW8 545 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 KANSL1LA0AUZ9 987 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 UBDO15205 165 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 MSCO60682 206 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 CEP78Q5JTW2 689 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 WDR93Q6P2C0 686 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 DET1Q7L5Y6 550 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 TERB1Q8NA31 727 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 HELQQ8TDG4 1101 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 FIG4Q92562 907 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 SENP8Q96LD8 212 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 APBA2Q99767 749 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 OMDQ99983 421 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 TMEM245Q9H330 911 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 EVA1BQ9NVM1 165 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 NDOR1Q9UHB4 597 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 ZMYM5Q9UJ78 669 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 GNPTGQ9UJJ9 305 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 FMN2Q9NZ56 1722 aa8.89□□□□□ -0.99
PTCD3-201ENST00000254630 MEI4A8MW99 385 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 TBL1XO60907 577 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 BAIAP3O94812 1187 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 KRT6AP02538 564 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 KRT6BP04259 564 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 GSTM1P09488 218 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 KRT6CP48668 564 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 IRAK1BP1Q5VVH5 260 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 GPR141Q7Z602 305 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 HOMEZQ8IX15 550 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 KLHL4Q9C0H6 718 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 WDR41Q9HAD4 459 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 MID1IP1Q9NPA3 183 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 SHOC2Q9UQ13 582 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 FKTNO75072 461 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 PPP2R1BP30154 601 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 ELK3P41970 407 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 SKIV2L2P42285 1042 aaKnown RBP8.88□□□□□ -0.99
PTCD3-201ENST00000254630 RPL21P46778 160 aaKnown RBP8.88□□□□□ -0.99
PTCD3-201ENST00000254630 DLG4P78352 724 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 CRYMQ14894 314 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 MTDHQ86UE4 582 aaKnown RBP8.88□□□□□ -0.99
PTCD3-201ENST00000254630 SYTL1Q8IYJ3 562 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 COPS5Q92905 334 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 MYLPFQ96A32 169 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 ULBP1Q9BZM6 244 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 FHDC1Q9C0D6 1143 aaPredicted RBP8.88□□□□□ -0.99
PTCD3-201ENST00000254630 RGS14O43566 566 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 SERPINI2O75830 405 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 FCGR1AP12314 374 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 POLR2LP62875 67 aaKnown RBP8.88□□□□□ -0.99
PTCD3-201ENST00000254630 TRAF2Q12933 501 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 ANGPT1Q15389 498 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 ATAD3BQ5T9A4 648 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 NT5DC1Q5TFE4 455 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 FGD2Q7Z6J4 655 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 LUZP2Q86TE4 346 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 CLYBLQ8N0X4 340 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 TPD52L3Q96J77 140 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 ZMAT2Q96NC0 199 aaKnown RBP8.88□□□□□ -0.99
PTCD3-201ENST00000254630 PANX3Q96QZ0 392 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 POLR1EQ9GZS1 481 aaKnown RBP8.88□□□□□ -0.99
PTCD3-201ENST00000254630 TAS2R13Q9NYV9 303 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 IL1RAPL1Q9NZN1 696 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 CDH9Q9ULB4 789 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 SNX13Q9Y5W8 968 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 A0A087X0B3 334 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 SERPINA4P29622 427 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 RXRGP48443 463 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 ZNF135P52742 658 aaPredicted RBP8.88□□□□□ -0.99
PTCD3-201ENST00000254630 CBWD6Q4V339 395 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 AGKQ53H12 422 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 WSCD1Q658N2 575 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 FAM228AQ86W67 206 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 TMEM132CQ8N3T6 1108 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 ZNF557Q8N988 423 aaPredicted RBP8.88□□□□□ -0.99
PTCD3-201ENST00000254630 MAGEC3Q8TD91 643 aa8.88□□□□□ -0.99
PTCD3-201ENST00000254630 CDHR5Q9HBB8 845 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms