RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 RTP3Q9BQQ7 232 aa19.23■□□□□ 0.67
PDLIM4-201ENST00000253754 NOD2Q9HC29 1040 aa19.23■□□□□ 0.67
PDLIM4-201ENST00000253754 DDIT4Q9NX09 232 aa19.23■□□□□ 0.67
PDLIM4-201ENST00000253754 C2orf71A6NGG8 1288 aa19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 HHLA1C9JL84 531 aa19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 CBX6O95503 412 aa19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 FDFT1P37268 417 aa19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 GLUD2P49448 558 aa19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 PAFAH1B3Q15102 231 aaKnown RBP19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 TAF1BQ53T94 588 aaPredicted RBP19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 BZW1Q7L1Q6 419 aaKnown RBP19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 BHLHA9Q7RTU4 235 aa19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 MTDHQ86UE4 582 aaKnown RBP19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 NPWQ8N729 165 aa19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 ARMC2Q8NEN0 867 aa19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 MOCS1Q9NZB8 636 aa19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 TSC2P49815 1807 aa19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 CCDC195A0A1B0GUA6 201 aa19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 OPHN1O60890 802 aa19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 DCTN3O75935 186 aa19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 HSPA1AP0DMV8 641 aaKnown RBP19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 HSPA1BP0DMV9 641 aaKnown RBP19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 TROVE2P10155 538 aaKnown RBP eCLIP19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 ALDH3A1P30838 453 aa19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 BRCC3P46736 316 aa19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 PDK1Q15118 436 aa19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 UPP1Q16831 310 aa19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 RAB41Q5JT25 222 aa19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 CES4AQ5XG92 561 aa19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 CES3Q6UWW8 571 aa19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 TMEM86AQ8N2M4 240 aa19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 ARNTL2Q8WYA1 636 aa19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 MYLPFQ96A32 169 aa19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 RNF208Q9H0X6 261 aa19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 YY1AP1Q9H869 796 aa19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 PLLPQ9Y342 182 aa19.22■□□□□ 0.67
PDLIM4-201ENST00000253754 A0A0U1RQF3 1178 aa19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 CHUKO15111 745 aa19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 FBXO21O94952 628 aa19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 LTFP02788 710 aa19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 GSTA2P09210 222 aa19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 T-ENOLP0DO92 83 aa19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 DSC3Q14574 896 aa19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 MBTPS1Q14703 1052 aa19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 LRRC8BQ6P9F7 803 aa19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 UTP4Q969X6 686 aaKnown RBP19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 PGBD4Q96DM1 585 aa19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 TBC1D31Q96DN5 1066 aa19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 PAK6Q9NQU5 681 aaPredicted RBP19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 CNGB3Q9NQW8 809 aa19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 SYBUQ9NX95 663 aa19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 MYO18AQ92614 2054 aaKnown RBP19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 F8W810 466 aa19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 C2CD2LO14523 706 aa19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 PPP1R12AO14974 1030 aaPredicted RBP19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 USP12O75317 370 aa19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 KRT38O76015 456 aa19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 STK10O94804 968 aaKnown RBP19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 HSPA8P11142 646 aaKnown RBP19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 CCNFP41002 786 aa19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 SARNPP82979 210 aaKnown RBP19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 TRAF7Q6Q0C0 670 aa19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 MRPL10Q7Z7H8 261 aaKnown RBP19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 NDUFAF2Q8N183 169 aa19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 AGAP3Q96P47 875 aa19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 TMEM209Q96SK2 561 aa19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 GORASP1Q9BQQ3 440 aa19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 ZNF395Q9H8N7 513 aaPredicted RBP19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 TXLNGQ9NUQ3 528 aa19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 TMLHEQ9NVH6 421 aa19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 FBXW11Q9UKB1 542 aa19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 CDH9Q9ULB4 789 aa19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 GIT1Q9Y2X7 761 aa19.21■□□□□ 0.67
PDLIM4-201ENST00000253754 SDR42E2A6NKP2 422 aa19.2■□□□□ 0.66
PDLIM4-201ENST00000253754 ZNF623O75123 536 aa19.2■□□□□ 0.66
PDLIM4-201ENST00000253754 SKIV2L2P42285 1042 aaKnown RBP19.2■□□□□ 0.66
PDLIM4-201ENST00000253754 RAB27AP51159 221 aa19.2■□□□□ 0.66
PDLIM4-201ENST00000253754 TPI1P60174 286 aa19.2■□□□□ 0.66
PDLIM4-201ENST00000253754 SEMA3BQ13214 749 aa19.2■□□□□ 0.66
PDLIM4-201ENST00000253754 LGSNQ5TDP6 509 aa19.2■□□□□ 0.66
PDLIM4-201ENST00000253754 STEAP4Q687X5 459 aa19.2■□□□□ 0.66
PDLIM4-201ENST00000253754 PID1Q7Z2X4 250 aa19.2■□□□□ 0.66
PDLIM4-201ENST00000253754 PRR11Q96HE9 360 aaPredicted RBP19.2■□□□□ 0.66
PDLIM4-201ENST00000253754 KCNK13Q9HB14 408 aa19.2■□□□□ 0.66
PDLIM4-201ENST00000253754 PSAT1Q9Y617 370 aa19.2■□□□□ 0.66
PDLIM4-201ENST00000253754 SQORQ9Y6N5 450 aa19.2■□□□□ 0.66
PDLIM4-201ENST00000253754 SF3B1O75533 1304 aaKnown RBP eCLIP19.2■□□□□ 0.661e-7■■■■■ 172.3
PDLIM4-201ENST00000253754 B3GAT3O94766 335 aa19.2■□□□□ 0.66
PDLIM4-201ENST00000253754 F7P08709 466 aaPredicted RBP19.2■□□□□ 0.66
PDLIM4-201ENST00000253754 FAM163BP0C2L3 166 aa19.2■□□□□ 0.66
PDLIM4-201ENST00000253754 BDNFP23560 247 aa19.2■□□□□ 0.66
PDLIM4-201ENST00000253754 PTPN3P26045 913 aa19.2■□□□□ 0.66
PDLIM4-201ENST00000253754 IFRD2Q12894 506 aaPredicted RBP19.2■□□□□ 0.66
PDLIM4-201ENST00000253754 E2F5Q15329 346 aa19.2■□□□□ 0.66
PDLIM4-201ENST00000253754 CEP57Q86XR8 500 aa19.2■□□□□ 0.66
PDLIM4-201ENST00000253754 SMARCD1Q96GM5 515 aa19.2■□□□□ 0.66
PDLIM4-201ENST00000253754 TRIM55Q9BYV6 548 aa19.2■□□□□ 0.66
PDLIM4-201ENST00000253754 KLHL8Q9P2G9 620 aaPredicted RBP19.2■□□□□ 0.66
PDLIM4-201ENST00000253754 ZFP69BQ9UJL9 534 aa19.2■□□□□ 0.66
PDLIM4-201ENST00000253754 INPP5FQ9Y2H2 1132 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms