RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 CASP10Q92851 521 aa23.9■■□□□ 1.42
MSX2-201ENST00000239243 CATSPERBQ9H7T0 1116 aa23.9■■□□□ 1.42
MSX2-201ENST00000239243 PCDHA11Q9Y5I1 949 aa23.9■■□□□ 1.42
MSX2-201ENST00000239243 GOLGA6L7A0A1B0GV03 622 aa23.9■■□□□ 1.42
MSX2-201ENST00000239243 A0A1W2PQH9 124 aa23.9■■□□□ 1.42
MSX2-201ENST00000239243 SDR42E2A6NKP2 422 aa23.9■■□□□ 1.42
MSX2-201ENST00000239243 TCP11X1B4DZS4 312 aa23.9■■□□□ 1.42
MSX2-201ENST00000239243 ASMTLO95671 621 aa23.9■■□□□ 1.42
MSX2-201ENST00000239243 LZTR1Q8N653 840 aa23.9■■□□□ 1.42
MSX2-201ENST00000239243 STAMBPL1Q96FJ0 436 aa23.9■■□□□ 1.42
MSX2-201ENST00000239243 SNX10Q9Y5X0 201 aa23.9■■□□□ 1.42
MSX2-201ENST00000239243 VWA8A3KMH1 1905 aa23.89■■□□□ 1.42
MSX2-201ENST00000239243 PLXNA3P51805 1871 aa23.89■■□□□ 1.41
MSX2-201ENST00000239243 KCNK1O00180 336 aa23.89■■□□□ 1.41
MSX2-201ENST00000239243 HOXC13P31276 330 aa23.89■■□□□ 1.41
MSX2-201ENST00000239243 MSANTD2Q6P1R3 559 aa23.89■■□□□ 1.41
MSX2-201ENST00000239243 C6orf89Q6UWU4 347 aa23.89■■□□□ 1.41
MSX2-201ENST00000239243 CTAGE3PQ8IX95 158 aa23.89■■□□□ 1.41
MSX2-201ENST00000239243 TP53INP2Q8IXH6 220 aa23.89■■□□□ 1.41
MSX2-201ENST00000239243 DEFB118Q96PH6 123 aa23.89■■□□□ 1.41
MSX2-201ENST00000239243 TGS1Q96RS0 853 aaKnown RBP23.89■■□□□ 1.41
MSX2-201ENST00000239243 NMUR1Q9HB89 426 aa23.89■■□□□ 1.41
MSX2-201ENST00000239243 MARCH5Q9NX47 278 aa23.89■■□□□ 1.41
MSX2-201ENST00000239243 SFMBT1Q9UHJ3 866 aa23.89■■□□□ 1.41
MSX2-201ENST00000239243 ERI2A8K979 691 aaKnown RBP23.88■■□□□ 1.41
MSX2-201ENST00000239243 H7C4K7 107 aa23.88■■□□□ 1.41
MSX2-201ENST00000239243 PQBP1O60828 265 aaKnown RBP23.88■■□□□ 1.41
MSX2-201ENST00000239243 PAGE1O75459 146 aa23.88■■□□□ 1.41
MSX2-201ENST00000239243 KRT37O76014 449 aa23.88■■□□□ 1.41
MSX2-201ENST00000239243 C1QAP02745 245 aa23.88■■□□□ 1.41
MSX2-201ENST00000239243 MT-ND3P03897 115 aa23.88■■□□□ 1.41
MSX2-201ENST00000239243 SLC2A3P11169 496 aa23.88■■□□□ 1.41
MSX2-201ENST00000239243 SLC11A1P49279 550 aa23.88■■□□□ 1.41
MSX2-201ENST00000239243 DDR2Q16832 855 aa23.88■■□□□ 1.41
MSX2-201ENST00000239243 TTC39BQ5VTQ0 682 aaPredicted RBP23.88■■□□□ 1.41
MSX2-201ENST00000239243 RWDD4Q6NW29 188 aaKnown RBP23.88■■□□□ 1.41
MSX2-201ENST00000239243 FUT10Q6P4F1 479 aa23.88■■□□□ 1.41
MSX2-201ENST00000239243 CNPY4Q8N129 248 aa23.88■■□□□ 1.41
MSX2-201ENST00000239243 SPPL2BQ8TCT7 592 aa23.88■■□□□ 1.41
MSX2-201ENST00000239243 CEP41Q9BYV8 373 aa23.88■■□□□ 1.41
MSX2-201ENST00000239243 GPR62Q9BZJ7 368 aa23.88■■□□□ 1.41
MSX2-201ENST00000239243 SIK2Q9H0K1 926 aa23.88■■□□□ 1.41
MSX2-201ENST00000239243 OGDHLQ9ULD0 1010 aa23.88■■□□□ 1.41
MSX2-201ENST00000239243 RTN3O95197 1032 aaPredicted RBP23.88■■□□□ 1.41
MSX2-201ENST00000239243 SRGAP2BP0DMP2 458 aa23.88■■□□□ 1.41
MSX2-201ENST00000239243 GRIA1P42261 906 aa23.88■■□□□ 1.41
MSX2-201ENST00000239243 WDR4P57081 412 aaKnown RBP23.88■■□□□ 1.41
MSX2-201ENST00000239243 CORO7P57737 925 aa23.88■■□□□ 1.41
MSX2-201ENST00000239243 ITIH4Q14624 930 aa23.88■■□□□ 1.41
MSX2-201ENST00000239243 NUGGCQ68CJ6 796 aa23.88■■□□□ 1.41
MSX2-201ENST00000239243 PPM1NQ8N819 430 aa23.88■■□□□ 1.41
MSX2-201ENST00000239243 TBC1D31Q96DN5 1066 aa23.88■■□□□ 1.41
MSX2-201ENST00000239243 IL37Q9NZH6 218 aa23.88■■□□□ 1.41
MSX2-201ENST00000239243 TANC1Q9C0D5 1861 aa23.87■■□□□ 1.41
MSX2-201ENST00000239243 TTC3P53804 2025 aa23.87■■□□□ 1.41
MSX2-201ENST00000239243 TM9SF1O15321 606 aa23.87■■□□□ 1.41
MSX2-201ENST00000239243 PIAS1O75925 651 aa23.87■■□□□ 1.41
MSX2-201ENST00000239243 CPB1P15086 417 aa23.87■■□□□ 1.41
MSX2-201ENST00000239243 RPA3P35244 121 aaPredicted RBP23.87■■□□□ 1.41
MSX2-201ENST00000239243 NRG1Q02297 640 aaPredicted RBP23.87■■□□□ 1.41
MSX2-201ENST00000239243 PRPF39Q86UA1 669 aaKnown RBP23.87■■□□□ 1.41
MSX2-201ENST00000239243 CRIPAKQ8N1N5 446 aa23.87■■□□□ 1.41
MSX2-201ENST00000239243 PGLYRP2Q96PD5 576 aa23.87■■□□□ 1.41
MSX2-201ENST00000239243 TLR6Q9Y2C9 796 aa23.87■■□□□ 1.41
MSX2-201ENST00000239243 PSEN1P49768 467 aa23.87■■□□□ 1.41
MSX2-201ENST00000239243 GATMP50440 423 aa23.87■■□□□ 1.41
MSX2-201ENST00000239243 IFT88Q13099 833 aa23.87■■□□□ 1.41
MSX2-201ENST00000239243 GPR17Q13304 367 aa23.87■■□□□ 1.41
MSX2-201ENST00000239243 SEPT7Q16181 437 aaKnown RBP23.87■■□□□ 1.41
MSX2-201ENST00000239243 TEX44Q53QW1 395 aa23.87■■□□□ 1.41
MSX2-201ENST00000239243 MANEALQ5VSG8 457 aa23.87■■□□□ 1.41
MSX2-201ENST00000239243 STEAP4Q687X5 459 aa23.87■■□□□ 1.41
MSX2-201ENST00000239243 MPP5Q8N3R9 675 aa23.87■■□□□ 1.41
MSX2-201ENST00000239243 C2orf15Q8WU43 125 aaKnown RBP23.87■■□□□ 1.41
MSX2-201ENST00000239243 PAIP2Q9BPZ3 127 aaKnown RBP23.87■■□□□ 1.41
MSX2-201ENST00000239243 GBA3Q9H227 469 aa23.87■■□□□ 1.41
MSX2-201ENST00000239243 PLAC1Q9HBJ0 212 aa23.87■■□□□ 1.41
MSX2-201ENST00000239243 FAM92AA1XBS5 289 aa23.86■■□□□ 1.41
MSX2-201ENST00000239243 FAM159BA6NKW6 160 aa23.86■■□□□ 1.41
MSX2-201ENST00000239243 MSI1O43347 362 aaKnown RBP23.86■■□□□ 1.41
MSX2-201ENST00000239243 CXCL10P02778 98 aa23.86■■□□□ 1.41
MSX2-201ENST00000239243 HHATQ5VTY9 493 aa23.86■■□□□ 1.41
MSX2-201ENST00000239243 CASC4Q6P4E1 433 aa23.86■■□□□ 1.41
MSX2-201ENST00000239243 ANKS3Q6ZW76 656 aa23.86■■□□□ 1.41
MSX2-201ENST00000239243 LRRC43Q8N309 656 aa23.86■■□□□ 1.41
MSX2-201ENST00000239243 OTUD6BQ8N6M0 293 aa23.86■■□□□ 1.41
MSX2-201ENST00000239243 FCRL2Q96LA5 508 aaPredicted RBP23.86■■□□□ 1.41
MSX2-201ENST00000239243 HIPK3Q9H422 1215 aa23.86■■□□□ 1.41
MSX2-201ENST00000239243 COMMD8Q9NX08 183 aa23.86■■□□□ 1.41
MSX2-201ENST00000239243 NEU3Q9UQ49 428 aa23.86■■□□□ 1.41
MSX2-201ENST00000239243 KCNU1A8MYU2 1149 aa23.86■■□□□ 1.41
MSX2-201ENST00000239243 F5H423 210 aaPredicted RBP23.86■■□□□ 1.41
MSX2-201ENST00000239243 FAM155BO75949 473 aa23.86■■□□□ 1.41
MSX2-201ENST00000239243 SUN1O94901 812 aa23.86■■□□□ 1.41
MSX2-201ENST00000239243 AP2A1O95782 977 aa23.86■■□□□ 1.41
MSX2-201ENST00000239243 SNRPAP09012 282 aaKnown RBP23.86■■□□□ 1.41
MSX2-201ENST00000239243 PGAM1P18669 254 aa23.86■■□□□ 1.41
MSX2-201ENST00000239243 RGS9BPQ6ZS82 235 aa23.86■■□□□ 1.41
MSX2-201ENST00000239243 BANPQ8N9N5 519 aa23.86■■□□□ 1.41
MSX2-201ENST00000239243 ATAD1Q8NBU5 361 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms