RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 RPL34P49207 117 aaKnown RBP11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 ITPRIPL2Q3MIP1 535 aa11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 TIGD7Q6NT04 549 aaPredicted RBP11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 FBXL22Q6P050 247 aa11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 PID1Q7Z2X4 250 aa11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 PYROXD2Q8N2H3 581 aa11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 RCOR3Q9P2K3 495 aaPredicted RBP11.45□□□□□ -0.58
TNFAIP3-201ENST00000237289 CCDC188H7C350 402 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 MTSS1O43312 755 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 TADA3O75528 432 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 ECEL1O95672 775 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 POU2F2P09086 479 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 EPHB1P54762 984 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 RPS24P62847 133 aaKnown RBP11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 SARNPP82979 210 aaKnown RBP11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 DLX2Q07687 328 aaPredicted RBP11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 LY6G5CQ5SRR4 150 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 TMEM184AQ6ZMB5 413 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 PGBD3Q8N328 593 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 USP33Q8TEY7 942 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 TFB1MQ8WVM0 346 aaKnown RBP11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 RNF157Q96PX1 679 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 SLC22A12Q96S37 553 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 KCTD15Q96SI1 283 aaPredicted RBP11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 IGSF9Q9P2J2 1179 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 FAM92AA1XBS5 289 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 LATS1O95835 1130 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 EFEMP2O95967 443 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 TGM2P21980 687 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 NFKBIAP25963 317 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 TUBB4BP68371 445 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 MMRN1Q13201 1228 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 MS4A13Q5J8X5 152 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 ITPRIPL1Q6GPH6 555 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 PGAP3Q96FM1 320 aaPredicted RBP11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 NDC80O14777 642 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 SYNCRIPO60506 623 aaKnown RBP11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 SLU7O95391 586 aaKnown RBP11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 CCR2P41597 374 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 DGKGP49619 791 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 CCDC33Q8N5R6 958 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 ZFYVE19Q96K21 471 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 KRT12Q99456 494 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 CINPQ9BW66 212 aaPredicted RBP11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 DYRK4Q9NR20 520 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 ARHGEF4Q9NR80 690 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 KCNN4O15554 427 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 ZDHHC11BP0C7U3 371 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 NR2C2P49116 596 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 PPP1R15BQ5SWA1 713 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 TMC8Q8IU68 726 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 NDUFAF2Q8N183 169 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 ATP11CQ8NB49 1132 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 PDCD6IPQ8WUM4 868 aaKnown RBP11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 NXPE3Q969Y0 559 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 MS4A14Q96JA4 679 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 CSPG4P5Q96PW8 444 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 TLR10Q9BXR5 811 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 SPHK2Q9NRA0 654 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 CDH22Q9UJ99 828 aa11.44□□□□□ -0.58
TNFAIP3-201ENST00000237289 FNDC1Q4ZHG4 1894 aaPredicted RBP11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 LUC7L3O95232 432 aaKnown RBP11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 MARCKSL1P49006 195 aa11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 KDSRQ06136 332 aa11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 STARD3Q14849 445 aa11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 TCEAL1Q15170 157 aa11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 SNX30Q5VWJ9 437 aa11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 TANGO2Q6ICL3 276 aa11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 RAB17Q9H0T7 212 aa11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 CWC15Q9P013 229 aaKnown RBP11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 CFAP69A5D8W1 941 aa11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 MBTPS2O43462 519 aa11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 GLP2RO95838 553 aa11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 CA4P22748 312 aa11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 MCM3P25205 808 aa11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 FNDC3BQ53EP0 1204 aaKnown RBP11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 CIR1Q86X95 450 aaPredicted RBP11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 SHDQ96IW2 340 aa11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 C1orf74Q96LT6 269 aa11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 ASB16Q96NS5 453 aa11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 MYADMQ96S97 322 aa11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 FAM118BQ9BPY3 351 aa11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 TMPRSS4Q9NRS4 437 aa11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 ZNF185O15231 689 aa11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 TYRP14679 529 aa11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 IL1R2P27930 398 aa11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 EPHA5P54756 1037 aa11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 OTUD4Q01804 1114 aaKnown RBP11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 GRSF1Q12849 480 aaKnown RBP eCLIP11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 RUNX3Q13761 415 aa11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 BYSLQ13895 437 aaKnown RBP11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 DPYSL2Q16555 572 aa11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 HTR3DQ70Z44 454 aa11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 ZNF276Q8N554 614 aa11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 LRRC57Q8N9N7 239 aa11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 CCHCR1Q8TD31 782 aa11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 OSCP1Q8WVF1 389 aa11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 HES6Q96HZ4 224 aa11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 NUMBLQ9Y6R0 609 aa11.43□□□□□ -0.58
TNFAIP3-201ENST00000237289 GABBR2O75899 941 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms