RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 CDK4P11802 303 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 PCSK6P29122 969 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 MAPK10P53779 464 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 PEX6Q13608 980 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 CMPK2Q5EBM0 449 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 TMPRSS6Q8IU80 811 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 ULK2Q8IYT8 1036 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 C7orf26Q96N11 449 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 APOL6Q9BWW8 343 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 RNPEPQ9H4A4 650 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 IFT122Q9HBG6 1241 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 FAM49BQ9NUQ9 324 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 SLC7A8Q9UHI5 535 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 MCM3APO60318 1980 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 E2F8A0AVK6 867 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 H3BSA7 217 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 HCRTO43612 131 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 ZMPSTE24O75844 475 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 GSRP00390 522 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 IL1BP01584 269 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 F7P08709 466 aaPredicted RBP9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 PDGFRBP09619 1106 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 VDRP11473 427 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 STT3AP46977 705 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 RXRGP48443 463 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 EIF2B2P49770 351 aaKnown RBP9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 HIC1Q14526 733 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 FAM47CQ5HY64 1035 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 PPP1R26Q5T8A7 1209 aaPredicted RBP9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 ITPRIPL1Q6GPH6 555 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 DPY19L2Q6NUT2 758 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 LBX2Q6XYB7 198 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 SAPCD2Q86UD0 394 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 CLEC4CQ8WTT0 213 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 ZNF778Q96MU6 729 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 HAPLN3Q96S86 360 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 CCDC106Q9BWC9 280 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 PAIP1Q9H074 479 aaKnown RBP9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 KLC2Q9H0B6 622 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 CLEC11AQ9Y240 323 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 PPME1Q9Y570 386 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 ADCY6O43306 1168 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 BPGMP07738 259 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 C6orf222P0C671 652 aaPredicted RBP9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 HOXD12P35452 270 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 CHN2P52757 468 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 TTC30AQ86WT1 665 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 RAVER1Q8IY67 606 aaKnown RBP9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 TRPM4Q8TD43 1214 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 CEP41Q9BYV8 373 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 C2orf40Q9H1Z8 148 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 GBA2Q9HCG7 927 aaPredicted RBP9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 PIM2Q9P1W9 311 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 TNFSF13BQ9Y275 285 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 HBS1LQ9Y450 684 aaKnown RBP9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 NME7Q9Y5B8 376 aa9.65□□□□□ -0.86
HLA-DOA-201ENST00000229829 SCN1AP35498 2009 aa9.65□□□□□ -0.87
HLA-DOA-201ENST00000229829 A0A087WZ62 844 aa9.65□□□□□ -0.87
HLA-DOA-201ENST00000229829 SNNO75324 88 aaPredicted RBP9.65□□□□□ -0.87
HLA-DOA-201ENST00000229829 PABPC4LP0CB38 370 aaKnown RBP9.65□□□□□ -0.87
HLA-DOA-201ENST00000229829 CLCN2P51788 898 aa9.65□□□□□ -0.87
HLA-DOA-201ENST00000229829 RAP1GDS1P52306 607 aa9.65□□□□□ -0.87
HLA-DOA-201ENST00000229829 HDAC4P56524 1084 aa9.65□□□□□ -0.87
HLA-DOA-201ENST00000229829 RPL10AP62906 217 aaKnown RBP9.65□□□□□ -0.87
HLA-DOA-201ENST00000229829 FOLH1Q04609 750 aa9.65□□□□□ -0.87
HLA-DOA-201ENST00000229829 PDK1Q15118 436 aa9.65□□□□□ -0.87
HLA-DOA-201ENST00000229829 GOLGA7BQ2TAP0 167 aa9.65□□□□□ -0.87
HLA-DOA-201ENST00000229829 GJC2Q5T442 439 aaPredicted RBP9.65□□□□□ -0.87
HLA-DOA-201ENST00000229829 WDR78Q5VTH9 848 aa9.65□□□□□ -0.87
HLA-DOA-201ENST00000229829 ATG16L1Q676U5 607 aa9.65□□□□□ -0.87
HLA-DOA-201ENST00000229829 CRLF3Q8IUI8 442 aa9.65□□□□□ -0.87
HLA-DOA-201ENST00000229829 FBXO16Q8IX29 292 aaPredicted RBP9.65□□□□□ -0.87
HLA-DOA-201ENST00000229829 RTP4Q96DX8 246 aa9.65□□□□□ -0.87
HLA-DOA-201ENST00000229829 SPATA33Q96N06 139 aa9.65□□□□□ -0.87
HLA-DOA-201ENST00000229829 FDXACB1Q9BRP7 624 aaPredicted RBP9.65□□□□□ -0.87
HLA-DOA-201ENST00000229829 PPEF2O14830 753 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 CFLARO15519 480 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 KRT38O76015 456 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 RAG1P15918 1043 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 CYP2F1P24903 491 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 LPIN1Q14693 890 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 SLC9A4Q6AI14 798 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 TMEM214Q6NUQ4 689 aaKnown RBP9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 ACAD11Q709F0 780 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 AMIGO2Q86SJ2 522 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 ACOT1Q86TX2 421 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 RNF148Q8N7C7 305 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 AZIN2Q96A70 460 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 FAM167AQ96KS9 214 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 EBNA1BP2Q99848 306 aaKnown RBP9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 NRDE2Q9H7Z3 1164 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 PDGFCQ9NRA1 345 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 DTNAQ9Y4J8 743 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 SMIM31A0A1B0GVY4 71 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 ARHGAP10A1A4S6 786 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 BCLAF3A2AJT9 711 aaKnown RBP9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 WDR27A2RRH5 827 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 FAM159BA6NKW6 160 aa9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 TRDMT1O14717 391 aaKnown RBP9.64□□□□□ -0.87
HLA-DOA-201ENST00000229829 PAPSS1O43252 624 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms