RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 PYROXD2Q8N2H3 581 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 ACTL9Q8TC94 416 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 HERPUD2Q9BSE4 406 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 CCDC85CA6NKD9 419 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 SCAMP3O14828 347 aaKnown RBP12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 TLL1O43897 1013 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 GABBR2O75899 941 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 FBXO21O94952 628 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 NOS2P35228 1153 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 GABRB2P47870 512 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 OTUD4Q01804 1114 aaKnown RBP12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 EFEMP1Q12805 493 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 FASTKD3Q14CZ7 662 aaKnown RBP12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 ARL13BQ3SXY8 428 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 PKDCCQ504Y2 493 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 C10orf120Q5SQS8 335 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 RASIP1Q5U651 963 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 NPNTQ6UXI9 565 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 DENND5BQ6ZUT9 1274 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 FBXO22Q8NEZ5 403 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 ZMIZ2Q8NF64 920 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 SERPINB12Q96P63 405 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 CCDC77Q9BR77 488 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 NMRK1Q9NWW6 199 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 PCYOX1Q9UHG3 505 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 DNPEPQ9ULA0 475 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 A0A1W2PPM1 405 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 FAM47DPA6NHR8 397 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 SYN3O14994 580 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 MSI1O43347 362 aaKnown RBP12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 PYGLP06737 847 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 ETS1P14921 441 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 DAOAP59103 153 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 KPNB1Q14974 876 aaKnown RBP12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 CA9Q16790 459 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 IZUMO3Q5VZ72 239 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 TRNP1Q6NT89 227 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 TRMT10CQ7L0Y3 403 aaKnown RBP12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 FIBCD1Q8N539 461 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 MAGEB18Q96M61 343 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 CNGB3Q9NQW8 809 aa12.06□□□□□ -0.48
TNFAIP1-201ENST00000226225 MDM4O15151 490 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 RBP3P10745 1247 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 EIF3EP60228 445 aaKnown RBP12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 WDR5P61964 334 aaKnown RBP12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 USP4Q13107 963 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 TFDP2Q14188 446 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 C11orf91Q3C1V1 193 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 SNX30Q5VWJ9 437 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 ARFGAP1Q8N6T3 406 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 CCDC185Q8N715 623 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 FNIP1Q8TF40 1166 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 GRK7Q8WTQ7 553 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 STMN2Q93045 179 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 TOP1MTQ969P6 601 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 SNF8Q96H20 258 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 RBM15Q96T37 977 aaKnown RBP eCLIP12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 ARMCX1Q9P291 453 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 SLC4A7Q9Y6M7 1214 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 A6NHS1 94 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 SP100P23497 879 aaPredicted RBP12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 MAN1A1P33908 653 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 RASSF2P50749 326 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 HDAC4P56524 1084 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 FPGSQ05932 587 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 SMAD1Q15797 465 aaKnown RBP12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 RNF19BQ6ZMZ0 732 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 CROCCP2Q86T23 111 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 ATL2Q8NHH9 583 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 SCG3Q8WXD2 468 aaKnown RBP12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 PRR11Q96HE9 360 aaPredicted RBP12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 TRABDQ9H4I3 376 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 CCDC134Q9H6E4 229 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 SPG21Q9NZD8 308 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 AMPD1P23109 780 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 ALDH1A3P47895 512 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 BASP1P80723 227 aaKnown RBP12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 P3H1Q32P28 736 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 NUP93Q8N1F7 819 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 IGSF21Q96ID5 467 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 PEBP4Q96S96 227 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 CERS4Q9HA82 394 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 FBXO6Q9NRD1 293 aaPredicted RBP12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 SCOCQ9UIL1 159 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 THSD7BQ9C0I4 1608 aa12.05□□□□□ -0.48
TNFAIP1-201ENST00000226225 DGKIO75912 1065 aa12.04□□□□□ -0.48
TNFAIP1-201ENST00000226225 TBX18O95935 607 aa12.04□□□□□ -0.48
TNFAIP1-201ENST00000226225 ATP6V1C1P21283 382 aa12.04□□□□□ -0.48
TNFAIP1-201ENST00000226225 YWHAQP27348 245 aa12.04□□□□□ -0.48
TNFAIP1-201ENST00000226225 ARSEP51690 589 aa12.04□□□□□ -0.48
TNFAIP1-201ENST00000226225 YWHAGP61981 247 aaKnown RBP eCLIP12.04□□□□□ -0.48
TNFAIP1-201ENST00000226225 LAMB3Q13751 1172 aa12.04□□□□□ -0.48
TNFAIP1-201ENST00000226225 SLC1A5Q15758 541 aa12.04□□□□□ -0.48
TNFAIP1-201ENST00000226225 SLC25A52Q3SY17 297 aa12.04□□□□□ -0.48
TNFAIP1-201ENST00000226225 CD300LGQ6UXG3 332 aa12.04□□□□□ -0.48
TNFAIP1-201ENST00000226225 SLC25A41Q8N5S1 370 aa12.04□□□□□ -0.48
TNFAIP1-201ENST00000226225 SMC6Q96SB8 1091 aa12.04□□□□□ -0.48
TNFAIP1-201ENST00000226225 ROPN1BQ9BZX4 212 aaPredicted RBP12.04□□□□□ -0.48
TNFAIP1-201ENST00000226225 ROPN1Q9HAT0 212 aaPredicted RBP12.04□□□□□ -0.48
TNFAIP1-201ENST00000226225 CXXC1Q9P0U4 656 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms