RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 CSH2P0DML3 217 aa25.6■■□□□ 1.69
RUNDC3A-201ENST00000225441 ARMC2Q8NEN0 867 aa25.6■■□□□ 1.69
RUNDC3A-201ENST00000225441 C18orf25Q96B23 403 aaPredicted RBP25.6■■□□□ 1.69
RUNDC3A-201ENST00000225441 MTMR10Q9NXD2 777 aa25.6■■□□□ 1.69
RUNDC3A-201ENST00000225441 CORO1CQ9ULV4 474 aaPredicted RBP25.6■■□□□ 1.69
RUNDC3A-201ENST00000225441 MAD1L1Q9Y6D9 718 aa25.6■■□□□ 1.69
RUNDC3A-201ENST00000225441 SDR42E2A6NKP2 422 aa25.6■■□□□ 1.69
RUNDC3A-201ENST00000225441 MEIS3P2A8K0S8 358 aa25.6■■□□□ 1.69
RUNDC3A-201ENST00000225441 GABBR2O75899 941 aa25.6■■□□□ 1.69
RUNDC3A-201ENST00000225441 VHLP40337 213 aa25.6■■□□□ 1.69
RUNDC3A-201ENST00000225441 ARL4AP40617 200 aa25.6■■□□□ 1.69
RUNDC3A-201ENST00000225441 PTDSS1P48651 473 aaKnown RBP25.6■■□□□ 1.69
RUNDC3A-201ENST00000225441 FAXCQ5TGI0 409 aa25.6■■□□□ 1.69
RUNDC3A-201ENST00000225441 LRRC8BQ6P9F7 803 aa25.6■■□□□ 1.69
RUNDC3A-201ENST00000225441 NDUFAF2Q8N183 169 aa25.6■■□□□ 1.69
RUNDC3A-201ENST00000225441 STKLD1Q8NE28 680 aa25.6■■□□□ 1.69
RUNDC3A-201ENST00000225441 DEPDC1BQ8WUY9 529 aa25.6■■□□□ 1.69
RUNDC3A-201ENST00000225441 C11orf49Q9H6J7 331 aa25.6■■□□□ 1.69
RUNDC3A-201ENST00000225441 RNF19AQ9NV58 838 aa25.6■■□□□ 1.69
RUNDC3A-201ENST00000225441 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.6■■□□□ 1.69
RUNDC3A-201ENST00000225441 PDCD11Q14690 1871 aaKnown RBP25.6■■□□□ 1.69
RUNDC3A-201ENST00000225441 XPOTO43592 962 aaKnown RBP25.59■■□□□ 1.69
RUNDC3A-201ENST00000225441 OPHN1O60890 802 aa25.59■■□□□ 1.69
RUNDC3A-201ENST00000225441 ENTPD5O75356 428 aa25.59■■□□□ 1.69
RUNDC3A-201ENST00000225441 SKIP12755 728 aa25.59■■□□□ 1.69
RUNDC3A-201ENST00000225441 PNPLA4P41247 253 aa25.59■■□□□ 1.69
RUNDC3A-201ENST00000225441 CHI3L2Q15782 390 aa25.59■■□□□ 1.69
RUNDC3A-201ENST00000225441 INSCQ1MX18 579 aa25.59■■□□□ 1.69
RUNDC3A-201ENST00000225441 DNAL1Q4LDG9 190 aa25.59■■□□□ 1.69
RUNDC3A-201ENST00000225441 HTR3CQ8WXA8 447 aa25.59■■□□□ 1.69
RUNDC3A-201ENST00000225441 LPPQ93052 612 aa25.59■■□□□ 1.69
RUNDC3A-201ENST00000225441 FBXO6Q9NRD1 293 aaPredicted RBP25.59■■□□□ 1.69
RUNDC3A-201ENST00000225441 GDAP2Q9NXN4 497 aa25.59■■□□□ 1.69
RUNDC3A-201ENST00000225441 GIT1Q9Y2X7 761 aa25.59■■□□□ 1.69
RUNDC3A-201ENST00000225441 TRIP11Q15643 1979 aa25.59■■□□□ 1.69
RUNDC3A-201ENST00000225441 FAM237BA0A1B0GVD1 139 aa25.58■■□□□ 1.69
RUNDC3A-201ENST00000225441 NBNO60934 754 aa25.58■■□□□ 1.69
RUNDC3A-201ENST00000225441 FAM163BP0C2L3 166 aa25.58■■□□□ 1.69
RUNDC3A-201ENST00000225441 GBE1Q04446 702 aa25.58■■□□□ 1.69
RUNDC3A-201ENST00000225441 SLC10A2Q12908 348 aaPredicted RBP25.58■■□□□ 1.69
RUNDC3A-201ENST00000225441 STX3Q13277 289 aa25.58■■□□□ 1.69
RUNDC3A-201ENST00000225441 GPNMBQ14956 572 aa25.58■■□□□ 1.69
RUNDC3A-201ENST00000225441 AGMOQ6ZNB7 445 aa25.58■■□□□ 1.69
RUNDC3A-201ENST00000225441 OR6B3Q8NGW1 331 aa25.58■■□□□ 1.69
RUNDC3A-201ENST00000225441 TTC8Q8TAM2 541 aa25.58■■□□□ 1.69
RUNDC3A-201ENST00000225441 ATP2A3Q93084 1043 aa25.58■■□□□ 1.69
RUNDC3A-201ENST00000225441 KCTD15Q96SI1 283 aaPredicted RBP25.58■■□□□ 1.69
RUNDC3A-201ENST00000225441 TMEM106CQ9BVX2 250 aa25.58■■□□□ 1.69
RUNDC3A-201ENST00000225441 C1orf21Q9H246 121 aa25.58■■□□□ 1.69
RUNDC3A-201ENST00000225441 HIPK3Q9H422 1215 aa25.58■■□□□ 1.69
RUNDC3A-201ENST00000225441 RGS18Q9NS28 235 aa25.58■■□□□ 1.69
RUNDC3A-201ENST00000225441 DCDC2Q9UHG0 476 aa25.58■■□□□ 1.69
RUNDC3A-201ENST00000225441 USP3Q9Y6I4 520 aa25.58■■□□□ 1.69
RUNDC3A-201ENST00000225441 PTGESO14684 152 aa25.58■■□□□ 1.68
RUNDC3A-201ENST00000225441 GLRA3O75311 464 aa25.58■■□□□ 1.68
RUNDC3A-201ENST00000225441 RINLQ6ZS11 566 aa25.58■■□□□ 1.68
RUNDC3A-201ENST00000225441 PGBD4Q96DM1 585 aa25.58■■□□□ 1.68
RUNDC3A-201ENST00000225441 PAWRQ96IZ0 340 aaKnown RBP25.58■■□□□ 1.68
RUNDC3A-201ENST00000225441 ZFP42Q96MM3 310 aa25.58■■□□□ 1.68
RUNDC3A-201ENST00000225441 ZNF560Q96MR9 790 aa25.58■■□□□ 1.68
RUNDC3A-201ENST00000225441 FAM49BQ9NUQ9 324 aa25.58■■□□□ 1.68
RUNDC3A-201ENST00000225441 DTLQ9NZJ0 730 aa25.58■■□□□ 1.68
RUNDC3A-201ENST00000225441 TAGLN3Q9UI15 199 aa25.58■■□□□ 1.68
RUNDC3A-201ENST00000225441 HMX2A2RU54 273 aa25.57■■□□□ 1.68
RUNDC3A-201ENST00000225441 SERPINA6P08185 405 aa25.57■■□□□ 1.68
RUNDC3A-201ENST00000225441 MLH1P40692 756 aa25.57■■□□□ 1.68
RUNDC3A-201ENST00000225441 GLUD2P49448 558 aa25.57■■□□□ 1.68
RUNDC3A-201ENST00000225441 KHDC1Q4VXA5 237 aaKnown RBP25.57■■□□□ 1.68
RUNDC3A-201ENST00000225441 C9orf57Q5W0N0 161 aa25.57■■□□□ 1.68
RUNDC3A-201ENST00000225441 NCBP2-AS2Q69YL0 99 aa25.57■■□□□ 1.68
RUNDC3A-201ENST00000225441 RTN4RL1Q86UN2 441 aaPredicted RBP25.57■■□□□ 1.68
RUNDC3A-201ENST00000225441 KCNV2Q8TDN2 545 aa25.57■■□□□ 1.68
RUNDC3A-201ENST00000225441 LINC01599Q8WXQ3 324 aa25.57■■□□□ 1.68
RUNDC3A-201ENST00000225441 DNAJC9Q8WXX5 260 aa25.57■■□□□ 1.68
RUNDC3A-201ENST00000225441 FTHL17Q9BXU8 183 aa25.57■■□□□ 1.68
RUNDC3A-201ENST00000225441 SLC13A1Q9BZW2 595 aa25.57■■□□□ 1.68
RUNDC3A-201ENST00000225441 NMUR2Q9GZQ4 415 aa25.57■■□□□ 1.68
RUNDC3A-201ENST00000225441 STX18Q9P2W9 335 aaKnown RBP25.57■■□□□ 1.68
RUNDC3A-201ENST00000225441 ATP11BQ9Y2G3 1177 aa25.57■■□□□ 1.68
RUNDC3A-201ENST00000225441 HBS1LQ9Y450 684 aaKnown RBP25.57■■□□□ 1.68
RUNDC3A-201ENST00000225441 SMNDC1O75940 238 aaKnown RBP eCLIP25.56■■□□□ 1.68
RUNDC3A-201ENST00000225441 PGAM1P18669 254 aa25.56■■□□□ 1.68
RUNDC3A-201ENST00000225441 MATKP42679 507 aa25.56■■□□□ 1.68
RUNDC3A-201ENST00000225441 MRPS35P82673 323 aaKnown RBP25.56■■□□□ 1.68
RUNDC3A-201ENST00000225441 SLC34A1Q06495 639 aa25.56■■□□□ 1.68
RUNDC3A-201ENST00000225441 NIPAL4Q0D2K0 466 aa25.56■■□□□ 1.68
RUNDC3A-201ENST00000225441 CCDC6Q16204 474 aa25.56■■□□□ 1.68
RUNDC3A-201ENST00000225441 SOWAHAQ2M3V2 549 aa25.56■■□□□ 1.68
RUNDC3A-201ENST00000225441 SYCP2LQ5T4T6 812 aa25.56■■□□□ 1.68
RUNDC3A-201ENST00000225441 LIMS2Q7Z4I7 341 aa25.56■■□□□ 1.68
RUNDC3A-201ENST00000225441 PPP1R10Q96QC0 940 aaKnown RBP25.56■■□□□ 1.68
RUNDC3A-201ENST00000225441 GAD1Q99259 594 aa25.56■■□□□ 1.68
RUNDC3A-201ENST00000225441 ZNF212Q9UDV6 495 aa25.56■■□□□ 1.68
RUNDC3A-201ENST00000225441 SUFUQ9UMX1 484 aa25.56■■□□□ 1.68
RUNDC3A-201ENST00000225441 RAD54BQ9Y620 910 aa25.56■■□□□ 1.68
RUNDC3A-201ENST00000225441 PSMG1O95456 288 aa25.56■■□□□ 1.68
RUNDC3A-201ENST00000225441 PGM1P36871 562 aa25.56■■□□□ 1.68
RUNDC3A-201ENST00000225441 FRG1Q14331 258 aaKnown RBP25.56■■□□□ 1.68
RUNDC3A-201ENST00000225441 SLC25A52Q3SY17 297 aa25.56■■□□□ 1.68
RUNDC3A-201ENST00000225441 TRMT10BQ6PF06 316 aaKnown RBP25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms