RNA–Protein interactions for RNA: ENST00000223500.8

CHMP5-201, Transcript of charged multivesicular body protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP5, Length 1,477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-201ENST00000223500 RPGRIP1Q96KN7 1286 aa17.07■□□□□ 0.32
CHMP5-201ENST00000223500 MYADMQ96S97 322 aa17.07■□□□□ 0.32
CHMP5-201ENST00000223500 ZFP14Q9HCL3 533 aa17.07■□□□□ 0.32
CHMP5-201ENST00000223500 SMARCAL1Q9NZC9 954 aa17.07■□□□□ 0.32
CHMP5-201ENST00000223500 REV3LO60673 3130 aa17.07■□□□□ 0.32
CHMP5-201ENST00000223500 PDE2AO00408 941 aaPredicted RBP17.06■□□□□ 0.32
CHMP5-201ENST00000223500 LAMP2P13473 410 aa17.06■□□□□ 0.32
CHMP5-201ENST00000223500 SLC6A4P31645 630 aa17.06■□□□□ 0.32
CHMP5-201ENST00000223500 SERPINB6P35237 376 aa17.06■□□□□ 0.32
CHMP5-201ENST00000223500 C5orf22Q49AR2 442 aa17.06■□□□□ 0.32
CHMP5-201ENST00000223500 RFWD3Q6PCD5 774 aa17.06■□□□□ 0.32
CHMP5-201ENST00000223500 BZW1Q7L1Q6 419 aaKnown RBP17.06■□□□□ 0.32
CHMP5-201ENST00000223500 BPIFB1Q8TDL5 484 aa17.06■□□□□ 0.32
CHMP5-201ENST00000223500 P3H4Q92791 437 aa17.06■□□□□ 0.32
CHMP5-201ENST00000223500 HERPUD2Q9BSE4 406 aa17.06■□□□□ 0.32
CHMP5-201ENST00000223500 FRMD8P1Q9BZ68 369 aaPredicted RBP17.06■□□□□ 0.32
CHMP5-201ENST00000223500 THG1LQ9NWX6 298 aaKnown RBP17.06■□□□□ 0.32
CHMP5-201ENST00000223500 NUP205Q92621 2012 aa17.06■□□□□ 0.32
CHMP5-201ENST00000223500 TCRBV7S2A1N4TA0A589 114 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 CTAGE15A4D2H0 777 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 HEPACAM2A8MVW5 462 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 WASH4PA8MWX3 477 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 CCDC188H7C350 402 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 APOC4-APOC2K7ER74 178 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 SCAMP3O14828 347 aaKnown RBP17.05■□□□□ 0.32
CHMP5-201ENST00000223500 DCLK1O15075 740 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 APOC2P02655 101 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 CYBBP04839 570 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 CTAGE8P0CG41 777 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 VIPR2P41587 438 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 NR2C2P49116 596 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 ADCY2Q08462 1091 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 MTSS1LQ765P7 747 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 ZNF572Q7Z3I7 529 aaPredicted RBP17.05■□□□□ 0.32
CHMP5-201ENST00000223500 CTAGE6Q86UF2 777 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 CTAGE4Q8IX94 777 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 LZTR1Q8N653 840 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 PLD5Q8N7P1 536 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 RTL3Q8N8U3 475 aaKnown RBP17.05■□□□□ 0.32
CHMP5-201ENST00000223500 TDRD5Q8NAT2 981 aaKnown RBP17.05■□□□□ 0.32
CHMP5-201ENST00000223500 HJURPQ8NCD3 748 aaPredicted RBP17.05■□□□□ 0.32
CHMP5-201ENST00000223500 IGSF8Q969P0 613 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 TMA16Q96EY4 203 aaKnown RBP17.05■□□□□ 0.32
CHMP5-201ENST00000223500 AP1M1Q9BXS5 423 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 MPP6Q9NZW5 540 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 GRXCR2A6NFK2 248 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 TRDMT1O14717 391 aaKnown RBP17.05■□□□□ 0.32
CHMP5-201ENST00000223500 MBTPS2O43462 519 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 TSPAN3O60637 253 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 IFNAR2P48551 515 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 PAFAH1B3Q15102 231 aaKnown RBP17.05■□□□□ 0.32
CHMP5-201ENST00000223500 MPPE1Q53F39 396 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 NCBP2-AS2Q69YL0 99 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 C1orf228Q6PIY5 440 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 CCDC117Q8IWD4 279 aaPredicted RBP17.05■□□□□ 0.32
CHMP5-201ENST00000223500 SPATA4Q8NEY3 305 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 CARD6Q9BX69 1037 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 ETNK2Q9NVF9 386 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 TMEM248Q9NWD8 314 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 EPS15L1Q9UBC2 864 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 NEU3Q9UQ49 428 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 RAD54BQ9Y620 910 aa17.05■□□□□ 0.32
CHMP5-201ENST00000223500 SZT2Q5T011 3432 aa17.04■□□□□ 0.32
CHMP5-201ENST00000223500 MYOFQ9NZM1 2061 aa17.04■□□□□ 0.32
CHMP5-201ENST00000223500 CLDN11O75508 207 aa17.04■□□□□ 0.32
CHMP5-201ENST00000223500 MAPKAPK2P49137 400 aa17.04■□□□□ 0.32
CHMP5-201ENST00000223500 CDH4P55283 916 aa17.04■□□□□ 0.32
CHMP5-201ENST00000223500 CCNG2Q16589 344 aa17.04■□□□□ 0.32
CHMP5-201ENST00000223500 TANGO2Q6ICL3 276 aa17.04■□□□□ 0.32
CHMP5-201ENST00000223500 CHST9Q7L1S5 443 aa17.04■□□□□ 0.32
CHMP5-201ENST00000223500 YAF2Q8IY57 180 aa17.04■□□□□ 0.32
CHMP5-201ENST00000223500 CFAP52Q8N1V2 620 aa17.04■□□□□ 0.32
CHMP5-201ENST00000223500 RIN3Q8TB24 985 aa17.04■□□□□ 0.32
CHMP5-201ENST00000223500 DDI1Q8WTU0 396 aa17.04■□□□□ 0.32
CHMP5-201ENST00000223500 OSCP1Q8WVF1 389 aa17.04■□□□□ 0.32
CHMP5-201ENST00000223500 ELSPBP1Q96BH3 223 aa17.04■□□□□ 0.32
CHMP5-201ENST00000223500 HAUS1Q96CS2 278 aa17.04■□□□□ 0.32
CHMP5-201ENST00000223500 DUS2Q9NX74 493 aaKnown RBP17.04■□□□□ 0.32
CHMP5-201ENST00000223500 FAM50BQ9Y247 325 aa17.04■□□□□ 0.32
CHMP5-201ENST00000223500 HEY1Q9Y5J3 304 aa17.04■□□□□ 0.32
CHMP5-201ENST00000223500 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.03■□□□□ 0.32
CHMP5-201ENST00000223500 A0A1B0GVM2 712 aa17.03■□□□□ 0.32
CHMP5-201ENST00000223500 TCAF2A6NFQ2 919 aa17.03■□□□□ 0.32
CHMP5-201ENST00000223500 GFRA2O00451 464 aa17.03■□□□□ 0.32
CHMP5-201ENST00000223500 MCF2LO15068 1137 aa17.03■□□□□ 0.32
CHMP5-201ENST00000223500 TBL1XO60907 577 aa17.03■□□□□ 0.32
CHMP5-201ENST00000223500 CNTN5O94779 1100 aa17.03■□□□□ 0.32
CHMP5-201ENST00000223500 MX2P20592 715 aa17.03■□□□□ 0.32
CHMP5-201ENST00000223500 FCARP24071 287 aa17.03■□□□□ 0.32
CHMP5-201ENST00000223500 VCPP55072 806 aaKnown RBP17.03■□□□□ 0.32
CHMP5-201ENST00000223500 RPS24P62847 133 aaKnown RBP17.03■□□□□ 0.32
CHMP5-201ENST00000223500 OTUD4Q01804 1114 aaKnown RBP17.03■□□□□ 0.32
CHMP5-201ENST00000223500 ZNF177Q13360 481 aaPredicted RBP17.03■□□□□ 0.32
CHMP5-201ENST00000223500 SIX1Q15475 284 aaPredicted RBP17.03■□□□□ 0.32
CHMP5-201ENST00000223500 LEXMQ3ZCV2 418 aa17.03■□□□□ 0.32
CHMP5-201ENST00000223500 ALFQ53S48 1182 aa17.03■□□□□ 0.32
CHMP5-201ENST00000223500 MPP7Q5T2T1 576 aa17.03■□□□□ 0.32
CHMP5-201ENST00000223500 ARTNQ5T4W7 220 aa17.03■□□□□ 0.32
CHMP5-201ENST00000223500 NLRP14Q86W24 1093 aa17.03■□□□□ 0.32
CHMP5-201ENST00000223500 MFSD6LQ8IWD5 586 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms