RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 NEU3Q9UQ49 428 aa30.51■■■□□ 2.47
PABPN1-201ENST00000216727 SDR42E2A6NKP2 422 aa30.5■■■□□ 2.47
PABPN1-201ENST00000216727 MT-ND3P03897 115 aa30.5■■■□□ 2.47
PABPN1-201ENST00000216727 ZNF33AQ06730 810 aa30.5■■■□□ 2.47
PABPN1-201ENST00000216727 FAAP100Q0VG06 881 aa30.5■■■□□ 2.47
PABPN1-201ENST00000216727 STEAP4Q687X5 459 aa30.5■■■□□ 2.47
PABPN1-201ENST00000216727 MON1AQ86VX9 555 aa30.5■■■□□ 2.47
PABPN1-201ENST00000216727 CASP10Q92851 521 aa30.5■■■□□ 2.47
PABPN1-201ENST00000216727 STAMBPL1Q96FJ0 436 aa30.5■■■□□ 2.47
PABPN1-201ENST00000216727 VAT1Q99536 393 aa30.5■■■□□ 2.47
PABPN1-201ENST00000216727 FBXO44Q9H4M3 255 aa30.5■■■□□ 2.47
PABPN1-201ENST00000216727 NMUR1Q9HB89 426 aa30.5■■■□□ 2.47
PABPN1-201ENST00000216727 PCDHB5Q9Y5E4 795 aa30.5■■■□□ 2.47
PABPN1-201ENST00000216727 OR6C75A6NL08 312 aa30.49■■■□□ 2.47
PABPN1-201ENST00000216727 OAS1P00973 400 aaKnown RBP30.49■■■□□ 2.47
PABPN1-201ENST00000216727 HOXC13P31276 330 aa30.49■■■□□ 2.47
PABPN1-201ENST00000216727 FOXN2P32314 431 aa30.49■■■□□ 2.47
PABPN1-201ENST00000216727 PGFP49763 221 aa30.49■■■□□ 2.47
PABPN1-201ENST00000216727 TTC39BQ5VTQ0 682 aaPredicted RBP30.49■■■□□ 2.47
PABPN1-201ENST00000216727 PPM1NQ8N819 430 aa30.49■■■□□ 2.47
PABPN1-201ENST00000216727 TRHDEQ9UKU6 1024 aa30.49■■■□□ 2.47
PABPN1-201ENST00000216727 FAM159BA6NKW6 160 aa30.49■■■□□ 2.47
PABPN1-201ENST00000216727 TM9SF1O15321 606 aa30.49■■■□□ 2.47
PABPN1-201ENST00000216727 SLC1A5Q15758 541 aa30.49■■■□□ 2.47
PABPN1-201ENST00000216727 CTXN3Q4LDR2 81 aa30.49■■■□□ 2.47
PABPN1-201ENST00000216727 CTAGE3PQ8IX95 158 aa30.49■■■□□ 2.47
PABPN1-201ENST00000216727 PAIP2Q9BPZ3 127 aaKnown RBP30.49■■■□□ 2.47
PABPN1-201ENST00000216727 VWA8A3KMH1 1905 aa30.48■■■□□ 2.47
PABPN1-201ENST00000216727 CXorf49A8MYA2 514 aaPredicted RBP30.48■■■□□ 2.47
PABPN1-201ENST00000216727 PDK4Q16654 411 aa30.48■■■□□ 2.47
PABPN1-201ENST00000216727 FAM171A1Q5VUB5 890 aa30.48■■■□□ 2.47
PABPN1-201ENST00000216727 ZNF280DQ6N043 979 aa30.48■■■□□ 2.47
PABPN1-201ENST00000216727 NAT9Q9BTE0 207 aa30.48■■■□□ 2.47
PABPN1-201ENST00000216727 MOCS1Q9NZB8 636 aa30.48■■■□□ 2.47
PABPN1-201ENST00000216727 SFMBT1Q9UHJ3 866 aa30.48■■■□□ 2.47
PABPN1-201ENST00000216727 A0A1W2PQH9 124 aa30.47■■■□□ 2.47
PABPN1-201ENST00000216727 ALDH2P05091 517 aa30.47■■■□□ 2.47
PABPN1-201ENST00000216727 FGFR3P22607 806 aa30.47■■■□□ 2.47
PABPN1-201ENST00000216727 SLC18A2Q05940 514 aa30.47■■■□□ 2.47
PABPN1-201ENST00000216727 LGSNQ5TDP6 509 aa30.47■■■□□ 2.47
PABPN1-201ENST00000216727 CCDC121Q6ZUS5 278 aa30.47■■■□□ 2.47
PABPN1-201ENST00000216727 SH2D5Q6ZV89 423 aa30.47■■■□□ 2.47
PABPN1-201ENST00000216727 DPF3Q92784 378 aa30.47■■■□□ 2.47
PABPN1-201ENST00000216727 SERPINB11Q96P15 392 aa30.47■■■□□ 2.47
PABPN1-201ENST00000216727 SMYD2Q9NRG4 433 aa30.47■■■□□ 2.47
PABPN1-201ENST00000216727 IL37Q9NZH6 218 aa30.47■■■□□ 2.47
PABPN1-201ENST00000216727 F5H423 210 aaPredicted RBP30.47■■■□□ 2.47
PABPN1-201ENST00000216727 HOXA2O43364 376 aa30.47■■■□□ 2.47
PABPN1-201ENST00000216727 PAGE1O75459 146 aa30.47■■■□□ 2.47
PABPN1-201ENST00000216727 KRT37O76014 449 aa30.47■■■□□ 2.47
PABPN1-201ENST00000216727 ALDH1A2O94788 518 aa30.47■■■□□ 2.47
PABPN1-201ENST00000216727 SUN1O94901 812 aa30.47■■■□□ 2.47
PABPN1-201ENST00000216727 MANEALQ5VSG8 457 aa30.47■■■□□ 2.47
PABPN1-201ENST00000216727 CRIPAKQ8N1N5 446 aa30.47■■■□□ 2.47
PABPN1-201ENST00000216727 ARHGAP18Q8N392 663 aa30.47■■■□□ 2.47
PABPN1-201ENST00000216727 SH3TC2Q8TF17 1288 aa30.47■■■□□ 2.47
PABPN1-201ENST00000216727 GPR62Q9BZJ7 368 aa30.47■■■□□ 2.47
PABPN1-201ENST00000216727 SAGE1Q9NXZ1 904 aa30.47■■■□□ 2.47
PABPN1-201ENST00000216727 LRFN2Q9ULH4 789 aa30.47■■■□□ 2.47
PABPN1-201ENST00000216727 MYO16Q9Y6X6 1858 aa30.46■■■□□ 2.47
PABPN1-201ENST00000216727 ERI2A8K979 691 aaKnown RBP30.46■■■□□ 2.47
PABPN1-201ENST00000216727 FGF10O15520 208 aaPredicted RBP30.46■■■□□ 2.47
PABPN1-201ENST00000216727 COG7P83436 770 aa30.46■■■□□ 2.47
PABPN1-201ENST00000216727 DDR2Q16832 855 aa30.46■■■□□ 2.47
PABPN1-201ENST00000216727 TEX44Q53QW1 395 aa30.46■■■□□ 2.47
PABPN1-201ENST00000216727 RNF187Q5TA31 235 aaPredicted RBP30.46■■■□□ 2.47
PABPN1-201ENST00000216727 HHATQ5VTY9 493 aa30.46■■■□□ 2.47
PABPN1-201ENST00000216727 MSANTD2Q6P1R3 559 aa30.46■■■□□ 2.47
PABPN1-201ENST00000216727 GRAMD1AQ96CP6 724 aa30.46■■■□□ 2.47
PABPN1-201ENST00000216727 UNC93B1Q9H1C4 597 aa30.46■■■□□ 2.47
PABPN1-201ENST00000216727 MARCH5Q9NX47 278 aa30.46■■■□□ 2.47
PABPN1-201ENST00000216727 GRID1Q9ULK0 1009 aa30.46■■■□□ 2.47
PABPN1-201ENST00000216727 USP15Q9Y4E8 981 aaPredicted RBP30.46■■■□□ 2.47
PABPN1-201ENST00000216727 PLXNA3P51805 1871 aa30.46■■■□□ 2.47
PABPN1-201ENST00000216727 KCNU1A8MYU2 1149 aa30.46■■■□□ 2.47
PABPN1-201ENST00000216727 SNRPAP09012 282 aaKnown RBP30.46■■■□□ 2.47
PABPN1-201ENST00000216727 TRMT10BQ6PF06 316 aaKnown RBP30.46■■■□□ 2.47
PABPN1-201ENST00000216727 CEP57Q86XR8 500 aa30.46■■■□□ 2.47
PABPN1-201ENST00000216727 ARNTL2Q8WYA1 636 aa30.46■■■□□ 2.47
PABPN1-201ENST00000216727 SERAC1Q96JX3 654 aa30.46■■■□□ 2.47
PABPN1-201ENST00000216727 SIK2Q9H0K1 926 aa30.46■■■□□ 2.47
PABPN1-201ENST00000216727 GBA3Q9H227 469 aa30.46■■■□□ 2.47
PABPN1-201ENST00000216727 TRIM17Q9Y577 477 aa30.46■■■□□ 2.47
PABPN1-201ENST00000216727 TTC3P53804 2025 aa30.45■■■□□ 2.47
PABPN1-201ENST00000216727 WDR27A2RRH5 827 aa30.45■■■□□ 2.46
PABPN1-201ENST00000216727 MSI1O43347 362 aaKnown RBP30.45■■■□□ 2.46
PABPN1-201ENST00000216727 AP2A1O95782 977 aa30.45■■■□□ 2.46
PABPN1-201ENST00000216727 SRGAP2BP0DMP2 458 aa30.45■■■□□ 2.46
PABPN1-201ENST00000216727 NRG1Q02297 640 aaPredicted RBP30.45■■■□□ 2.46
PABPN1-201ENST00000216727 MTFR1Q15390 333 aa30.45■■■□□ 2.46
PABPN1-201ENST00000216727 ITPRIPL1Q6GPH6 555 aa30.45■■■□□ 2.46
PABPN1-201ENST00000216727 RWDD4Q6NW29 188 aaKnown RBP30.45■■■□□ 2.46
PABPN1-201ENST00000216727 LVRNQ6Q4G3 990 aa30.45■■■□□ 2.46
PABPN1-201ENST00000216727 LZTR1Q8N653 840 aa30.45■■■□□ 2.46
PABPN1-201ENST00000216727 TCP10LQ8TDR4 215 aa30.45■■■□□ 2.46
PABPN1-201ENST00000216727 TTC17Q96AE7 1141 aa30.45■■■□□ 2.46
PABPN1-201ENST00000216727 GORASP1Q9BQQ3 440 aa30.45■■■□□ 2.46
PABPN1-201ENST00000216727 TRIM56Q9BRZ2 755 aaKnown RBP30.45■■■□□ 2.46
PABPN1-201ENST00000216727 CATSPERBQ9H7T0 1116 aa30.45■■■□□ 2.46
PABPN1-201ENST00000216727 OSER1Q9NX31 292 aa30.45■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms