RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 CHD2O14647 1828 aaKnown RBP14.07□□□□□ -0.16
SIX4-201ENST00000216513 B4GALT4O60513 344 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 CLASP2O75122 1294 aaKnown RBP14.07□□□□□ -0.16
SIX4-201ENST00000216513 MAT2AP31153 395 aaKnown RBP14.07□□□□□ -0.16
SIX4-201ENST00000216513 PWP1Q13610 501 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 TFDP3Q5H9I0 405 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 SLC39A5Q6ZMH5 540 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 RAD9AQ99638 391 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 RUBCNLQ9H714 662 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 ARHGEF4Q9NR80 690 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 GRID2IPA4D2P6 1211 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 F8VZ95 297 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 NRP1O14786 923 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 INPP4BO15327 924 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 PSTPIP1O43586 416 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 ADRB2P07550 413 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 PURAQ00577 322 aaKnown RBP14.07□□□□□ -0.16
SIX4-201ENST00000216513 OTUD4Q01804 1114 aaKnown RBP14.07□□□□□ -0.16
SIX4-201ENST00000216513 MYBPC2Q14324 1141 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 ISLR2Q6UXK2 745 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 SPATS2Q86XZ4 545 aaKnown RBP14.07□□□□□ -0.16
SIX4-201ENST00000216513 COLGALT1Q8NBJ5 622 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 CLIP3Q96DZ5 547 aa14.07□□□□□ -0.16
SIX4-201ENST00000216513 A0A0U1RQJ8 604 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 GRM6O15303 877 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 INPPL1O15357 1258 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 RPN2P04844 631 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 ARFIP2P53365 341 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 TAGAPQ8N103 731 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 ALLCQ8N6M5 410 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 PIF1Q9H611 641 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 GMNCA6NCL1 334 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 SCAMP1O15126 338 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 MYL2P10916 166 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 CYTH1Q15438 398 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 RPAINQ86UA6 219 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 SIX5Q8N196 739 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 OR5B17Q8NGF7 314 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 WNT8BQ93098 351 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 PDZD7Q9H5P4 517 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 IL23AQ9NPF7 189 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 RGS18Q9NS28 235 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 TRIM33Q9UPN9 1127 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 MMGT1Q8N4V1 131 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 SETD7Q8WTS6 366 aaKnown RBP14.06□□□□□ -0.16
SIX4-201ENST00000216513 OSGEPQ9NPF4 335 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 SPATA6Q9NWH7 488 aaPredicted RBP14.06□□□□□ -0.16
SIX4-201ENST00000216513 MSI1O43347 362 aaKnown RBP14.06□□□□□ -0.16
SIX4-201ENST00000216513 GJA1P17302 382 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 NOS2P35228 1153 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 ZNF268Q14587 947 aaPredicted RBP14.06□□□□□ -0.16
SIX4-201ENST00000216513 RRP1BQ14684 758 aaKnown RBP14.06□□□□□ -0.16
SIX4-201ENST00000216513 NETO2Q8NC67 525 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 SLC9A7Q96T83 725 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 ZYG11BQ9C0D3 744 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 CNOT10Q9H9A5 744 aaKnown RBP14.06□□□□□ -0.16
SIX4-201ENST00000216513 WARS2Q9UGM6 360 aaKnown RBP14.06□□□□□ -0.16
SIX4-201ENST00000216513 SNX12Q9UMY4 172 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 ANO9A1A5B4 782 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 PFDN1O60925 122 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 GATMP50440 423 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 MPPE1Q53F39 396 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 ICA1LQ8NDH6 482 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 EFHD1Q9BUP0 239 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 POLR1EQ9GZS1 481 aaKnown RBP14.06□□□□□ -0.16
SIX4-201ENST00000216513 FGFR1OP2Q9NVK5 253 aa14.06□□□□□ -0.16
SIX4-201ENST00000216513 KCNK1O00180 336 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 CYP7B1O75881 506 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 RASGRP1O95267 797 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 ICAM3P32942 547 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 ALDH9A1P49189 494 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 ITGA8P53708 1063 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 KRT72Q14CN4 511 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 FSCBQ5H9T9 825 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 C3orf62Q6ZUJ4 267 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 TRABDQ9H4I3 376 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 KIF17Q9P2E2 1029 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 A0A0A6YYK5 440 aaPredicted RBP14.05□□□□□ -0.16
SIX4-201ENST00000216513 LOC100653049A0A140TA62 436 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 SYN3O14994 580 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 KRT34O76011 436 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 ENO3P13929 434 aaPredicted RBP14.05□□□□□ -0.16
SIX4-201ENST00000216513 CTPS1P17812 591 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 EN2P19622 333 aaPredicted RBP14.05□□□□□ -0.16
SIX4-201ENST00000216513 GLRBP48167 497 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 ARHGAP1Q07960 439 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 GRM2Q14416 872 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 EMBQ6PCB8 327 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.05□□□□□ -0.16
SIX4-201ENST00000216513 SLC44A2Q8IWA5 706 aaPredicted RBP14.05□□□□□ -0.16
SIX4-201ENST00000216513 TRIM15Q9C019 465 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 BPIFA1Q9NP55 256 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 APOA4P06727 396 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 ABL2P42684 1182 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 CASP5P51878 434 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 FUT11Q495W5 492 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 TRIML2Q8N7C3 387 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 LRRC37BQ96QE4 947 aa14.05□□□□□ -0.16
SIX4-201ENST00000216513 AHDC1Q5TGY3 1603 aaPredicted RBP14.05□□□□□ -0.16
SIX4-201ENST00000216513 MYO1CO00159 1063 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms