RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 NPNTQ6UXI9 565 aa11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 C4orf22Q6V702 233 aa11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 CROCCP3Q8IVE0 287 aa11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 CCDC28BQ9BUN5 200 aa11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 WDR41Q9HAD4 459 aa11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 SARS2Q9NP81 518 aaKnown RBP11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 CCDC167Q9P0B6 97 aa11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 RSL24D1Q9UHA3 163 aaKnown RBP11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 A0A096LPK6 155 aa11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 FAM155BO75949 473 aa11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 PHKA2P46019 1235 aa11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 RAP1GAPP47736 663 aa11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 MPP3Q13368 585 aa11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 NOL9Q5SY16 702 aaKnown RBP11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 SLC9A9Q8IVB4 645 aa11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 CCDC60Q8IWA6 550 aaPredicted RBP11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 LRRN4Q8WUT4 740 aa11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 NT5C1AQ9BXI3 368 aa11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 ARHGEF38Q9NXL2 777 aa11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 SNX2O60749 519 aa11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 LSM8O95777 96 aaKnown RBP11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 DLGAP3O95886 979 aa11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 CHRM1P11229 460 aaPredicted RBP11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 KDELR1P24390 212 aa11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 FDFT1P37268 417 aa11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 SULT1E1P49888 294 aa11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 AQP4P55087 323 aa11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 KRT72Q14CN4 511 aa11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 NFIL3Q16649 462 aa11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 AMIGO2Q86SJ2 522 aa11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 UNC45BQ8IWX7 931 aa11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 APBB2Q92870 758 aa11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 MARK4Q96L34 752 aa11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 HSD17B14Q9BPX1 270 aa11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 PLGRKTQ9HBL7 147 aa11.8□□□□□ -0.52
DNMT3B-201ENST00000201963 TRMUO75648 421 aaKnown RBP11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 APOA4P06727 396 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 GP5P40197 560 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 BFSP2Q13515 415 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 EML3Q32P44 896 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 DCAF6Q58WW2 860 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 ZNF554Q86TJ5 538 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 DNERQ8NFT8 737 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 ZBTB45Q96K62 511 aaPredicted RBP11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 IARS2Q9NSE4 1012 aaKnown RBP11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 ATRNL1Q5VV63 1379 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 hCG_1818297A0A087WSY0 165 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 DFFAO00273 331 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 ITGAVP06756 1048 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 ITGA2BP08514 1039 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 CCDC130P13994 396 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 SFSWAPQ12872 951 aaKnown RBP11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 IER5Q5VY09 327 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 CCDC103Q8IW40 242 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 C7orf61Q8IZ16 206 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 IPMKQ8NFU5 416 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 DCUN1D1Q96GG9 259 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 CGRRF1Q99675 332 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 MRPS26Q9BYN8 205 aaKnown RBP11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 PIF1Q9H611 641 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 PNPOQ9NVS9 261 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 SLC7A8Q9UHI5 535 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 GOLGB1Q14789 3259 aaKnown RBP11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 N4BP2Q86UW6 1770 aaPredicted RBP11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 ZNF839A8K0R7 811 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 TIMM44O43615 452 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 HUS1O60921 280 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 PIGNO95427 931 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 OATP04181 439 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 ITGB3P05106 788 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 ATP5BP06576 529 aaKnown RBP11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 MGAT1P26572 445 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 CCR3P51677 355 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 NAGLUP54802 743 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 NANOGNBQ7Z5D8 188 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 NECAB2Q7Z6G3 386 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 ZCCHC7Q8N3Z6 543 aaKnown RBP11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 GPRASP2Q96D09 838 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 LRRC40Q9H9A6 602 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 VTA1Q9NP79 307 aa11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 ZNF214Q9UL59 606 aaPredicted RBP11.79□□□□□ -0.52
DNMT3B-201ENST00000201963 ROBO3Q96MS0 1386 aa11.78□□□□□ -0.52
DNMT3B-201ENST00000201963 TPP1O14773 563 aa11.78□□□□□ -0.52
DNMT3B-201ENST00000201963 PPP1R11O60927 126 aaPredicted RBP11.78□□□□□ -0.52
DNMT3B-201ENST00000201963 INSRRP14616 1297 aa11.78□□□□□ -0.52
DNMT3B-201ENST00000201963 UBA1P22314 1058 aaKnown RBP11.78□□□□□ -0.52
DNMT3B-201ENST00000201963 LPIN1Q14693 890 aa11.78□□□□□ -0.52
DNMT3B-201ENST00000201963 METTL7BQ6UX53 244 aa11.78□□□□□ -0.52
DNMT3B-201ENST00000201963 FAM131BQ86XD5 332 aa11.78□□□□□ -0.52
DNMT3B-201ENST00000201963 C12orf50Q8NA57 414 aaPredicted RBP11.78□□□□□ -0.52
DNMT3B-201ENST00000201963 COLGALT1Q8NBJ5 622 aa11.78□□□□□ -0.52
DNMT3B-201ENST00000201963 SLAIN1Q8ND83 568 aa11.78□□□□□ -0.52
DNMT3B-201ENST00000201963 DNAJB3Q8WWF6 145 aa11.78□□□□□ -0.52
DNMT3B-201ENST00000201963 TUBGCP3Q96CW5 907 aa11.78□□□□□ -0.52
DNMT3B-201ENST00000201963 SEPHS2Q99611 448 aa11.78□□□□□ -0.52
DNMT3B-201ENST00000201963 MRGBPQ9NV56 204 aa11.78□□□□□ -0.52
DNMT3B-201ENST00000201963 KIF17Q9P2E2 1029 aa11.78□□□□□ -0.52
DNMT3B-201ENST00000201963 DMTF1Q9Y222 760 aa11.78□□□□□ -0.52
DNMT3B-201ENST00000201963 SH3GLB1Q9Y371 365 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms