RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Tas2r115Q7M719 310 aa15.89■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Nox1Q8CIZ9 591 aa15.89■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Znf711A2ANX9 761 aa15.89■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Gbp11A9YVJ5 442 aa15.89■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Gm5930D3Z257 264 aa15.89■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Prdm15E9Q8T2 1174 aa15.89■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 PolP11369 1281 aa15.89■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Ces1cP23953 554 aa15.89■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 P3h1Q3V1T4 739 aa15.89■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 ChpfQ6IQX7 774 aa15.89■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 ItchQ8C863 864 aa15.89■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Olfr385Q8VGT1 312 aa15.89■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Tfap2dQ91ZK0 452 aa15.89■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Nmd3Q99L48 503 aaKnown RBP15.89■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Rin2Q9D684 903 aa15.89■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Dlc1Q9R0Z9 1092 aa15.89■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Dpysl4O35098 572 aa15.89■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Gjb1P28230 283 aa15.89■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Fam83hQ148V8 1209 aa15.89■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Grm6Q5NCH9 871 aa15.89■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Kcna5Q61762 602 aa15.89■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Syn2Q64332 586 aa15.89■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Rad9bQ6WBX7 403 aa15.89■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Clip4Q8CI96 704 aa15.89■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Pard3bQ9CSB4 1203 aa15.89■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Cdkl2Q9QUK0 568 aa15.89■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 TpteG5E8H5 664 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Unc5cO08747 931 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Psmc3O88685 442 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Scd1P13516 355 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 LipeP54310 759 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 ThraP63058 492 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Nemp1Q6ZQE4 437 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Ftsj1Q8CBC7 324 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Cog2Q921L5 731 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Lrp8Q924X6 996 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Slc12a4Q9JIS8 1085 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Cog8Q9JJA2 640 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Slc25a13Q9QXX4 676 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Mta2Q9R190 668 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Pnldc1B2RXZ1 531 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Hmgb4Q6P8W9 181 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 ChfrQ810L3 664 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Ubap1Q8BH48 502 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 TbcdQ8BYA0 1196 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 PhykplQ8R1K4 467 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 CygbQ9CX80 190 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Tgm2P21981 686 aaKnown RBP15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 MipP51180 263 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Arhgap45Q3TBD2 1116 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Fam83fQ3UKU4 495 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 MyrfQ3UR85 1138 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Adamts2Q8C9W3 1213 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Serpina3nQ91WP6 418 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Acot13Q9CQR4 140 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 XpotQ9CRT8 963 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Kat2bQ9JHD1 813 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Thsd7aQ69ZU6 1645 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Lzts3A2AHG0 700 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Gm8897L7N294 181 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Nr3c1P06537 783 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 PtprcP06800 1291 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Serpina6Q06770 397 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Tmem247Q497K7 211 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Otol1Q4ZJM7 482 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Them6Q80ZW2 207 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Dis3Q9CSH3 958 aaKnown RBP15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 MtrexQ9CZU3 1040 aaKnown RBP15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Magel2Q9QZ04 1284 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Bcl10Q9Z0H7 233 aa15.88■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Tmem165P52875 323 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 PrlrQ08501 608 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Glt6d1Q2NKH9 311 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 ScinQ60604 715 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 XpaQ64267 272 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Rtl3Q6P1Y1 553 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Ddx55Q6ZPL9 600 aaKnown RBP15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Gpr139Q80UC8 345 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Ttc24Q8BYG0 334 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Hdac7Q8C2B3 938 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Trim12aQ99PQ1 284 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Rec114Q9CWH4 259 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Sh2d4aQ9D7V1 421 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Gpr63Q9EQQ3 425 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Clec4aQ9QZ15 238 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Ighv11-2A0A075B5R8 117 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Stx7O70439 261 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Oprl1P35377 367 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 TankP70347 448 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Entpd7Q3TCT4 606 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Gstt2Q61133 244 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Runx1t1Q61909 577 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Olfr412Q7TRW7 312 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Ahcyl1Q80SW1 530 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Tubgcp5Q8BKN5 1024 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Olfr866Q8VFI7 312 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Olfr784Q8VFZ9 319 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Pin4Q9CWW6 131 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Pdpk1Q9Z2A0 559 aa15.87■□□□□ 0.13
Ccdc88b-201ENSMUST00000113440 Gli3Q61602 1583 aa15.87■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 23 ms