RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Zbtb9Q8CDC7 459 aa18.78■□□□□ 0.6
Trim47-202ENSMUST00000106441 Trim66Q924W6 1242 aa18.78■□□□□ 0.6
Trim47-202ENSMUST00000106441 Commd8Q9CZG3 183 aa18.78■□□□□ 0.6
Trim47-202ENSMUST00000106441 Tssk3Q9D2E1 268 aa18.78■□□□□ 0.6
Trim47-202ENSMUST00000106441 B4galt4Q9JJ04 344 aa18.78■□□□□ 0.6
Trim47-202ENSMUST00000106441 Cntnap3E9PY62 1287 aa18.78■□□□□ 0.6
Trim47-202ENSMUST00000106441 Gm20721E9Q2U8 318 aa18.78■□□□□ 0.6
Trim47-202ENSMUST00000106441 Abhd12bG3UZN6 359 aa18.78■□□□□ 0.6
Trim47-202ENSMUST00000106441 ChkaO54804 453 aa18.78■□□□□ 0.6
Trim47-202ENSMUST00000106441 Stx3Q64704 289 aa18.78■□□□□ 0.6
Trim47-202ENSMUST00000106441 Arhgef18Q6P9R4 1021 aa18.78■□□□□ 0.6
Trim47-202ENSMUST00000106441 Pum3Q8BKS9 647 aaKnown RBP18.78■□□□□ 0.6
Trim47-202ENSMUST00000106441 Csde1Q91W50 798 aaKnown RBP18.78■□□□□ 0.6
Trim47-202ENSMUST00000106441 AticQ9CWJ9 592 aaKnown RBP18.78■□□□□ 0.6
Trim47-202ENSMUST00000106441 Klhl35Q9CZ49 574 aa18.78■□□□□ 0.6
Trim47-202ENSMUST00000106441 PirQ9D711 290 aa18.78■□□□□ 0.6
Trim47-202ENSMUST00000106441 PllpQ9DCU2 182 aa18.78■□□□□ 0.6
Trim47-202ENSMUST00000106441 Mgea5Q9EQQ9 916 aa18.78■□□□□ 0.6
Trim47-202ENSMUST00000106441 PolhQ9JJN0 694 aa18.78■□□□□ 0.6
Trim47-202ENSMUST00000106441 Tnfrsf10bQ9QZM4 381 aa18.78■□□□□ 0.6
Trim47-202ENSMUST00000106441 Nupr1Q9WTK0 80 aa18.78■□□□□ 0.6
Trim47-202ENSMUST00000106441 Bmpr2O35607 1038 aa18.77■□□□□ 0.6
Trim47-202ENSMUST00000106441 EgfP01132 1217 aa18.77■□□□□ 0.6
Trim47-202ENSMUST00000106441 Crhr1P35347 415 aa18.77■□□□□ 0.6
Trim47-202ENSMUST00000106441 Faf2Q3TDN2 445 aa18.77■□□□□ 0.6
Trim47-202ENSMUST00000106441 Hsph1Q61699 858 aaKnown RBP18.77■□□□□ 0.6
Trim47-202ENSMUST00000106441 CyldQ80TQ2 952 aa18.77■□□□□ 0.6
Trim47-202ENSMUST00000106441 Znf598Q80YR4 908 aaKnown RBP18.77■□□□□ 0.6
Trim47-202ENSMUST00000106441 Klhl38Q8BSF5 581 aa18.77■□□□□ 0.6
Trim47-202ENSMUST00000106441 Pak5Q8C015 719 aa18.77■□□□□ 0.6
Trim47-202ENSMUST00000106441 Gm5591Q8CDK1 855 aa18.77■□□□□ 0.6
Trim47-202ENSMUST00000106441 Unc45bQ8CGY6 931 aaKnown RBP18.77■□□□□ 0.6
Trim47-202ENSMUST00000106441 Rem2Q8VEL9 341 aa18.77■□□□□ 0.6
Trim47-202ENSMUST00000106441 Olfr393Q8VGR6 312 aa18.77■□□□□ 0.6
Trim47-202ENSMUST00000106441 Ier5lQ99J55 406 aa18.77■□□□□ 0.6
Trim47-202ENSMUST00000106441 Ndc80Q9D0F1 642 aaKnown RBP18.77■□□□□ 0.6
Trim47-202ENSMUST00000106441 Chst7Q9EP78 484 aa18.77■□□□□ 0.6
Trim47-202ENSMUST00000106441 Tlr6Q9EPW9 795 aa18.77■□□□□ 0.6
Trim47-202ENSMUST00000106441 Gon4lQ9DB00 2260 aa18.77■□□□□ 0.6
Trim47-202ENSMUST00000106441 Pdzd7E9Q9W7 1021 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 AlpiF8VPQ6 554 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 FaahO08914 579 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Sept7O55131 436 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Rpl5P47962 297 aaKnown RBP18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Inpp5jP59644 1003 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Ezh1P70351 747 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Pdss1Q33DR2 409 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Hace1Q3U0D9 909 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Ampd1Q3V1D3 745 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Armcx2Q6A058 784 aaKnown RBP18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Klhl17Q6TDP3 640 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Gabbr2Q80T41 940 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Mkl1Q8K4J6 964 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Myoz3Q8R4E4 245 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Clptm1Q8VBZ3 664 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Olfr449Q8VGW8 311 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Ophn1Q99J31 802 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Jph2Q9ET78 696 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 ThadaA8C756 1938 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Vmn2r121A2BE32 847 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Arhgef26D3YYY8 869 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Ccdc175E9PVB3 822 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Trim30bE9PVL6 203 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Kbtbd2G3X9X1 623 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Adam15O88839 864 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 KitP05532 979 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Ca8P28651 291 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Itm2aQ61500 263 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Itih3Q61704 889 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Trim14Q8BVW3 440 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Tfb1mQ8JZM0 345 aaKnown RBP18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Tgif2lx2Q8K5B9 231 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Smg8Q8VE18 991 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Taf11Q99JX1 211 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Actr3Q99JY9 418 aaKnown RBP18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Psmd8Q9CX56 353 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Ap2b1Q9DBG3 937 aa18.76■□□□□ 0.59
Trim47-202ENSMUST00000106441 Fpr-rs4A4FUQ5 323 aa18.75■□□□□ 0.59
Trim47-202ENSMUST00000106441 Ccnyl1D3YUJ3 367 aa18.75■□□□□ 0.59
Trim47-202ENSMUST00000106441 Vmn2r84D3YWE3 849 aa18.75■□□□□ 0.59
Trim47-202ENSMUST00000106441 Gm3415J3QMS8 315 aa18.75■□□□□ 0.59
Trim47-202ENSMUST00000106441 Olfr611K7N609 323 aa18.75■□□□□ 0.59
Trim47-202ENSMUST00000106441 Olfr612L7N462 323 aa18.75■□□□□ 0.59
Trim47-202ENSMUST00000106441 Fam172aQ3TNH5 417 aa18.75■□□□□ 0.59
Trim47-202ENSMUST00000106441 Arid5aQ3U108 590 aa18.75■□□□□ 0.59
Trim47-202ENSMUST00000106441 Gata6Q61169 589 aa18.75■□□□□ 0.59
Trim47-202ENSMUST00000106441 Txndc8Q69AB2 127 aa18.75■□□□□ 0.59
Trim47-202ENSMUST00000106441 Olfr23Q7TRX4 325 aa18.75■□□□□ 0.59
Trim47-202ENSMUST00000106441 Zfp454Q80Y34 536 aa18.75■□□□□ 0.59
Trim47-202ENSMUST00000106441 Ppp1r12bQ8BG95 976 aa18.75■□□□□ 0.59
Trim47-202ENSMUST00000106441 Tyw3Q8BSA9 257 aa18.75■□□□□ 0.59
Trim47-202ENSMUST00000106441 Nat14Q8BVG8 206 aa18.75■□□□□ 0.59
Trim47-202ENSMUST00000106441 Snrnp25Q8VIK1 123 aa18.75■□□□□ 0.59
Trim47-202ENSMUST00000106441 PompQ9CQT5 141 aa18.75■□□□□ 0.59
Trim47-202ENSMUST00000106441 Gm3404Q9D506 307 aa18.75■□□□□ 0.59
Trim47-202ENSMUST00000106441 Atg7Q9D906 698 aa18.75■□□□□ 0.59
Trim47-202ENSMUST00000106441 Chrac1Q9JKP8 129 aa18.75■□□□□ 0.59
Trim47-202ENSMUST00000106441 Dnajc12Q9R022 198 aa18.75■□□□□ 0.59
Trim47-202ENSMUST00000106441 Top3bQ9Z321 862 aaKnown RBP18.75■□□□□ 0.59
Trim47-202ENSMUST00000106441 Akap17bA2A3V1 959 aa18.75■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms