RNA–Protein interactions for RNA: ENSMUST00000081654.12

Col18a1-202, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

TSL 1 (best) BASIC

Gene Col18a1, Length 5,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-202ENSMUST00000081654 Caap1Q8VDY9 356 aa16.67■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Sun1Q9D666 913 aaKnown RBP16.67■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Abt1Q9QYL7 269 aaKnown RBP16.67■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Znf609Q8BZ47 1413 aa16.67■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Adcy6Q01341 1165 aa16.66■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Map1sQ8C052 973 aa16.66■□□□□ 0.26
Col18a1-202ENSMUST00000081654 NclnQ8VCM8 563 aaKnown RBP16.66■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Lrrc40Q9CRC8 602 aa16.66■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Prl2a1Q9JHK0 228 aa16.66■□□□□ 0.26
Col18a1-202ENSMUST00000081654 B020011L13RikA0A087WQI7 412 aa16.66■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Zfp985A2A7A5 519 aa16.66■□□□□ 0.26
Col18a1-202ENSMUST00000081654 2010300C02RikE9Q3M9 1175 aa16.66■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Trdmt1O55055 415 aa16.66■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Acvr2bP27040 536 aa16.66■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Scn3bQ8BHK2 215 aa16.66■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Zfp64Q99KE8 643 aa16.66■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Tmem39aQ9CYC3 486 aa16.66■□□□□ 0.26
Col18a1-202ENSMUST00000081654 MrrfQ9D6S7 262 aaKnown RBP16.66■□□□□ 0.26
Col18a1-202ENSMUST00000081654 ThegQ9JMB1 375 aa16.66■□□□□ 0.26
Col18a1-202ENSMUST00000081654 DgkeQ9R1C6 564 aa16.66■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Htr2cP34968 459 aa16.66■□□□□ 0.26
Col18a1-202ENSMUST00000081654 TfamP40630 243 aa16.66■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Calb2Q08331 271 aa16.66■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Mtnr1aQ61184 353 aa16.66■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Hmgb4Q6P8W9 181 aa16.66■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Mtmr12Q80TA6 747 aa16.66■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Ssh3Q8K330 649 aa16.66■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Stra6O70491 670 aa16.66■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Cdk7Q03147 346 aa16.66■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Q8CCC3 530 aa16.66■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Pphln1Q8K2H1 381 aaKnown RBP16.66■□□□□ 0.26
Col18a1-202ENSMUST00000081654 PolbQ8K409 335 aa16.66■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Bcl10Q9Z0H7 233 aa16.66■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Robo1O89026 1612 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Sf3b1Q99NB9 1304 aaKnown RBP16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Zscan5bB2RTN3 468 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Smpdl3bP58242 456 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Pik3r5Q5SW28 871 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Vmn1r206Q8R277 312 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Dis3Q9CSH3 958 aaKnown RBP16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Ube4bQ9ES00 1173 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Cntnap2Q9CPW0 1332 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Gm5485A0A1D5RM98 91 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Aars2Q14CH7 980 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Ecm1Q61508 559 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Ifit3Q64345 403 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Bcl2l1Q64373 233 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Znf821Q6PD05 413 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Cdc16Q8R349 620 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Slc12a9Q99MR3 914 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Trip4Q9QXN3 581 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Rnf25Q9QZR0 456 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Pds5aQ6A026 1332 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Vmn2r19G5E8G4 854 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 B020004C17RikJ3QP07 232 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 PargO88622 969 aaKnown RBP16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Pkn1P70268 946 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Adra1dP97714 562 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 HyiQ8R1F5 277 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Gm43518A0A0G2JGB6 165 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Dpy19l4A2AJQ3 722 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Trmt1lA2RSY6 728 aaKnown RBP16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Kpna7C0LLJ0 499 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Vmn2r27D3YUK6 857 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Speer4cG3UXD1 256 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Gm10354K7N6A0 256 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Psma3O70435 255 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 DselQ0VBN2 1207 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Tcf4Q60722 670 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 StilQ60988 1262 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Nab1Q61122 486 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Wee2Q66JT0 555 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Pcdh19Q80TF3 1145 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Setdb2Q8C267 713 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Q8CD60 292 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Vmp1Q99KU0 406 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Cstf3Q99LI7 717 aaKnown RBP16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Tada1Q99LM9 335 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Cyp4f14Q9EP75 524 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Ndel1Q9ERR1 345 aa16.65■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Gm4869A0A1B0GSG7 984 aa16.64■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Csn1s1P19228 313 aa16.64■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Mis18bp1Q80WQ8 998 aa16.64■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Camkk2Q8C078 588 aa16.64■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Aim2Q91VJ1 354 aaKnown RBP16.64■□□□□ 0.26
Col18a1-202ENSMUST00000081654 Trim33Q99PP7 1142 aa16.64■□□□□ 0.26
Col18a1-202ENSMUST00000081654 A930018M24RikB7ZMY3 218 aa16.64■□□□□ 0.25
Col18a1-202ENSMUST00000081654 Il1rl1P14719 567 aa16.64■□□□□ 0.25
Col18a1-202ENSMUST00000081654 Nfkb1P25799 971 aa16.64■□□□□ 0.25
Col18a1-202ENSMUST00000081654 RxraP28700 467 aa16.64■□□□□ 0.25
Col18a1-202ENSMUST00000081654 Polr2lP62876 67 aa16.64■□□□□ 0.25
Col18a1-202ENSMUST00000081654 Nr6a1Q64249 495 aa16.64■□□□□ 0.25
Col18a1-202ENSMUST00000081654 VwdeQ6DFV8 926 aa16.64■□□□□ 0.25
Col18a1-202ENSMUST00000081654 Cdc14bQ6PFY9 485 aa16.64■□□□□ 0.25
Col18a1-202ENSMUST00000081654 Stk40Q7TNL3 435 aa16.64■□□□□ 0.25
Col18a1-202ENSMUST00000081654 TbcdQ8BYA0 1196 aa16.64■□□□□ 0.25
Col18a1-202ENSMUST00000081654 Ttc39cQ8VE09 580 aa16.64■□□□□ 0.25
Col18a1-202ENSMUST00000081654 Pak1ip1Q9DCE5 382 aaKnown RBP16.64■□□□□ 0.25
Col18a1-202ENSMUST00000081654 Astn1Q61137 1302 aa16.64■□□□□ 0.25
Col18a1-202ENSMUST00000081654 A0A1Y7VIU7 259 aa16.64■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms