RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Lzts1P60853 599 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Gbp10Q000W5 611 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Cxcl17Q5UW37 119 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Nr2e1Q64104 385 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Tmem151bQ68FE7 561 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Q6P2K3 674 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Slc39a4Q78IQ7 660 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Camta2Q80Y50 1208 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Dars2Q8BIP0 653 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Fam204aQ8C6C7 236 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 MmaaQ8C7H1 415 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 IntS13Q8QZV7 732 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Atad3Q925I1 591 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Smarcd2Q99JR8 531 aaKnown RBP7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Psma8Q9CWH6 250 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Syde1Q9DBZ9 737 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Nphs1Q9QZS7 1256 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Nek3Q9R0A5 511 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Bmp15Q9Z0L4 392 aa7.1□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Akap1O08715 857 aaKnown RBP7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Exoc7O35250 697 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Prkag1O54950 330 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 ChadO55226 358 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Grem1O70326 184 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Gm5571P01639 130 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Folr1P35846 255 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Stmn1P54227 149 aaKnown RBP7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Cyth2P63034 400 aaKnown RBP7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Tnfaip8l3Q3TBL6 204 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 FdxrQ61578 494 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Npdc1Q64322 332 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Tbc1d12Q6A039 696 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Lrig3Q6P1C6 1117 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Galnt10Q6P9S7 603 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 CtifQ6PEE2 600 aaKnown RBP7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Rhbdf1Q6PIX5 856 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Olfr855Q7TRF8 312 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Sh3rf2Q8BZT2 735 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Trmt10aQ8C1Z8 328 aaKnown RBP7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Rabep2Q91WG2 554 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ttc1Q91Z38 292 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Fads1Q920L1 447 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 SardhQ99LB7 919 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Abtb1Q99LJ2 478 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Vps33aQ9D2N9 598 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Atp6v1e2Q9D593 226 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Tmco5aQ9D9D5 303 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Xpo7Q9EPK7 1087 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Nme7Q9QXL8 395 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Coro1bQ9WUM3 484 aaKnown RBP7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Cpxm1Q9Z100 722 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ttc23lA6H6E9 458 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Olfr731F8VQB9 326 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Chil3O35744 398 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 C4bpaP08607 469 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Pax3P24610 479 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Nfkb1P25799 971 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 S100bP50114 92 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 LipeP54310 759 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 HelqQ2VPA6 1069 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Q32P12 615 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Fbxw2Q60584 422 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Wdr91Q7TMQ7 748 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Dnajc6Q80TZ3 938 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Ints6lQ8BND4 861 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Slco2b1Q8BXB6 683 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Vcpip1Q8CDG3 1220 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Mill2Q8HWE5 355 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 UvragQ8K245 698 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 D8Ertd738eQ8R1F0 94 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Sh2b1Q91ZM2 756 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Fam227bQ9D518 532 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 SgshQ9EQ08 502 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Tcirg1Q9JHF5 834 aa7.09□□□□□ -1.27
Bdnf-201ENSMUST00000053317 Gm13089A2AGW7 455 aa7.09□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Ralgps1A2AR50 585 aa7.09□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Ccdc13D3YV10 709 aa7.09□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Vmn2r77L7N2B7 854 aa7.09□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Cyp2b19O55071 492 aa7.09□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Usp2O88623 613 aa7.09□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Ptger3P30557 365 aa7.09□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Pou2f3P31362 431 aa7.09□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Rin3P59729 980 aa7.09□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Sycp3P70281 254 aa7.09□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Gsdmc2Q2KHK6 480 aa7.09□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Gsdmc4Q3TR54 480 aa7.09□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Wdr41Q3UDP0 460 aa7.09□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Birc2Q62210 612 aa7.09□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Tatdn1Q6P8M1 295 aa7.09□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Hmgxb4Q80Y32 594 aaKnown RBP7.09□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Gm5622Q810Q0 167 aa7.09□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Ldlrap1Q8C142 308 aa7.09□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Gsdmc3Q8CB12 480 aa7.09□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Slc26a7Q8R2Z3 656 aa7.09□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Smim14Q91VT8 99 aa7.09□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Pcdha10Q91Y20 946 aa7.09□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Elmod3Q91YP6 381 aa7.09□□□□□ -1.28
Bdnf-201ENSMUST00000053317 AvenQ9D9K3 342 aa7.09□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Lat2Q9JHL0 203 aa7.09□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Myo10F8VQB6 2062 aa7.08□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms