RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Dedd2Q8QZV0 330 aa10.91□□□□□ -0.66
Rnf40-201ENSMUST00000033088 MyocdQ8VIM5 935 aa10.91□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Depdc7Q91WS7 511 aa10.91□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Glra3Q91XP5 464 aa10.91□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Sh3glb1Q9JK48 365 aa10.91□□□□□ -0.66
Rnf40-201ENSMUST00000033088 L3mbtl1A2A5N8 826 aa10.91□□□□□ -0.66
Rnf40-201ENSMUST00000033088 1700011I03RikE9PYL8 271 aa10.91□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Gm10436L7N1Y3 520 aa10.91□□□□□ -0.66
Rnf40-201ENSMUST00000033088 ChkaO54804 453 aa10.91□□□□□ -0.66
Rnf40-201ENSMUST00000033088 BpgmP15327 259 aa10.91□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Hspa1bP17879 642 aaKnown RBP10.91□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Bcat1P24288 386 aa10.91□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Ak8Q32M07 479 aa10.91□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Nlrc4Q3UP24 1024 aa10.91□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Sorbs2Q3UTJ2 1180 aaKnown RBP10.91□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Grik5Q61626 979 aa10.91□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Dmc1Q61880 340 aa10.91□□□□□ -0.66
Rnf40-201ENSMUST00000033088 RgnQ64374 299 aa10.91□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Zc4h2Q68FG0 224 aa10.91□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Fam214aQ69ZK7 1075 aa10.91□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Podnl1Q6P3Y9 559 aa10.91□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Ttyh3Q6P5F7 524 aa10.91□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Magea3Q6T340 320 aa10.91□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Nup107Q8BH74 926 aa10.91□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Drd5Q8BLD9 478 aa10.91□□□□□ -0.66
Rnf40-201ENSMUST00000033088 DseQ8BLI4 958 aa10.91□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Hus1Q8BQY8 280 aa10.91□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Gstm4Q8R5I6 218 aa10.91□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Fam205a1D3YZF6 1314 aa10.91□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Gm16430A6X8J1 155 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Slc2a4P14142 509 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Fscn2Q32M02 492 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Ccndbp1Q3TVC7 356 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Smyd5Q3TYX3 416 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Grm6Q5NCH9 871 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Papss1Q60967 624 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Bcap31Q61335 245 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Lrrc8dQ8BGR2 859 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Tbc1d17Q8BYH7 645 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Wdr98Q8VC42 657 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Slxl1Q9D515 155 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Rab11fip1Q9D620 645 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Olfr711Q9EPG2 314 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Mmp19Q9JHI0 527 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Hs6st1Q9QYK5 411 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Tk2Q9R088 270 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Clcn2Q9R0A1 908 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Ccdc194A0A140LIT1 234 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Vmn2r-ps130A0A140T8U3 855 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Map7d3A2AEY4 876 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Klf1P46099 358 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 HexdcQ3U4H6 486 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Pdap1Q3UHX2 181 aaKnown RBP10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Fam129aQ3UW53 926 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Vsx2Q61412 361 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Ubxn7Q6P5G6 467 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Mrgprb8Q7TN51 330 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 3830417A13RikQ8BQJ2 303 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Slc35f5Q8R314 524 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Nrbp2Q91V36 499 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Subh2bvQ9D9Z7 123 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 AgkQ9ESW4 421 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Olig1Q9JKN5 260 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Mbd1Q9Z2E2 636 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Top3bQ9Z321 862 aaKnown RBP10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Efcab12V9GXH0 673 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 FAM186AQ9D9R9 1790 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Gm3147A0A0J9YU88 481 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Sult2a6B2RVI8 285 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 EXOC1LB9EK06 172 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Zfp850J3QPC5 689 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 MrasO08989 208 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Hoxa2P31245 372 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Pax7P47239 503 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 MipP51180 263 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Gja5Q01231 358 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Shcbp1lQ3TTP0 639 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Flot2Q60634 428 aaKnown RBP10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 CcnhQ61458 323 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Fndc3aQ8BX90 1198 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Lpcat2Q8BYI6 544 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Acvr1cQ8K348 493 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Klhl36Q8R124 613 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Pcdhb10Q91VE5 797 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Rnf31Q924T7 1066 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Kdelr1Q99JH8 212 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 GOLGA7BQ9D428 167 aa10.9□□□□□ -0.66
Rnf40-201ENSMUST00000033088 Armc3A2AU72 881 aa10.9□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Pde9aO70628 534 aa10.9□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Cst8P32766 142 aa10.9□□□□□ -0.67
Rnf40-201ENSMUST00000033088 DbtP53395 482 aa10.9□□□□□ -0.67
Rnf40-201ENSMUST00000033088 AcadsQ07417 412 aaKnown RBP10.9□□□□□ -0.67
Rnf40-201ENSMUST00000033088 CamkvQ3UHL1 512 aa10.9□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Olfr1057Q7TR75 315 aa10.9□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Arhgap15Q811M1 481 aa10.9□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Noc4lQ8BHY2 516 aa10.9□□□□□ -0.67
Rnf40-201ENSMUST00000033088 OgtQ8CGY8 1046 aa10.9□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Lin7aQ8JZS0 233 aa10.9□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Epn3Q91W69 636 aa10.9□□□□□ -0.67
Rnf40-201ENSMUST00000033088 Adcy4Q91WF3 1077 aa10.9□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms