RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Fibcd1A2AV25 459 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Rap1gap2Q5SVL6 712 aaKnown RBP18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Znf821Q6PD05 413 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 PoliQ6R3M4 717 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Paqr6Q6TCG5 343 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Slc16a9Q7TM99 508 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Iars2Q8BIJ6 1012 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Q8R1Y2 203 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Hdhd5Q91WM2 419 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Glra3Q91XP5 464 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Ophn1Q99J31 802 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Ubxn2aQ99KJ0 258 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Arl2Q9D0J4 184 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Fam227bQ9D518 532 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Pgam1Q9DBJ1 254 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Gm6657A0A1B0GRJ3 277 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Klhl41A2AUC9 606 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Ebf3O08791 596 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Scg3P47867 471 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Arl4aP61213 200 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Atp6v1b2P62814 511 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Adamts1P97857 968 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Mpzl3Q3V3F6 237 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Clec4b1Q7TS58 209 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Rnf168Q80XJ2 565 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Pyhin1Q8BV49 420 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Syne4Q8CII8 388 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Acad10Q8K370 1069 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Nup85Q8R480 656 aaKnown RBP18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 FtcdQ91XD4 541 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Pcdhb18Q91Y02 792 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Unc45aQ99KD5 944 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Ndufa10Q99LC3 355 aaKnown RBP18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 KlbQ99N32 1043 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Arpc2Q9CVB6 300 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Serpinb9bQ9DAV6 377 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Akr1c12Q9JLI0 323 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 LipaQ9Z0M5 397 aa18.84■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 DgkdE9PUQ8 1220 aa18.83■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Fbxl18E9PYR1 771 aa18.83■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 DcxO88809 366 aa18.83■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 ItgalP24063 1163 aa18.83■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 LdlrP35951 862 aa18.83■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Acot8P58137 320 aa18.83■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Grid2ipQ0QWG9 1203 aa18.83■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Znf235Q61116 645 aa18.83■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Zbtb41Q811F1 908 aa18.83■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Kansl2Q8BQR4 486 aa18.83■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Bmt2Q8BXK4 403 aa18.83■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Pgm2l1Q8CAA7 621 aa18.83■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Homer3Q99JP6 356 aa18.83■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Tpgs1Q99MS8 303 aa18.83■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Thg1lQ9CY52 298 aa18.83■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Drc3Q9D5E4 523 aa18.83■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Cldn22Q9D7U6 220 aa18.83■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Tdp2Q9JJX7 370 aa18.83■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 S1pr4Q9Z0L1 386 aa18.83■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Ern2Q9Z2E3 911 aa18.83■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Lama3Q61789 3330 aa18.83■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Olfr1160A2AVT0 319 aa18.83■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 Gm281D3Z1Y0 860 aa18.83■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 Cbfa2t2O70374 594 aa18.83■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 En1P09065 401 aa18.83■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 Slc6a13P31649 602 aa18.83■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 FynP39688 537 aa18.83■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 Tubgcp3P58854 905 aa18.83■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 Heatr9Q5QNV8 569 aa18.83■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 Nomo1Q6GQT9 1214 aaKnown RBP18.83■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 Senp5Q6NXL6 749 aa18.83■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 Zdhhc17Q80TN5 632 aa18.83■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 Ireb2Q811J3 963 aaKnown RBP18.83■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 Kcns3Q8BQZ8 491 aa18.83■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 Arhgef33Q8BW86 850 aa18.83■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 TdrpQ8C5P7 182 aa18.83■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 Cnot6Q8K3P5 557 aa18.83■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 Evi2bQ8VD58 444 aa18.83■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 Rnh1Q91VI7 456 aa18.83■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 RalbQ9JIW9 206 aa18.83■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 Adgra2Q91ZV8 1336 aa18.82■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 Gucy2dA0A0U1RPR8 1117 aa18.82■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 Pdzd7E9Q9W7 1021 aa18.82■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 XntrpcF8VQM8 1264 aa18.82■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 Slc12a1P55014 1095 aa18.82■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 CybbQ61093 570 aa18.82■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 Zdhhc19Q810M5 347 aa18.82■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 Cdkn2aipQ8BI72 563 aa18.82■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 Pcdha6Q91Y14 946 aa18.82■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 Pard3bQ9CSB4 1203 aa18.82■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 4933428M09RikQ9D3X3 192 aa18.82■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 Rsph3bQ9DA80 389 aa18.82■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 Map3k6Q9WTR2 1291 aa18.82■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 Ralgapa2A3KGS3 1872 aa18.82■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 Vmn2r72D3Z4N8 856 aa18.82■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 Foxm1O08696 760 aa18.82■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 Slc1a6O35544 561 aa18.82■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 JchainP01592 159 aa18.82■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 AlbP07724 608 aa18.82■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 Gnat1P20612 350 aa18.82■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 Gsta3P30115 221 aa18.82■□□□□ 0.6
Ccdc3-201ENSMUST00000027988 Abce1P61222 599 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms