RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Mup6A2AV72 179 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 St14P56677 855 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 DsppP97399 934 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 MelkQ61846 643 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Ntan1Q64311 310 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Gm5414Q6IFZ8 552 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 E2f7Q6S7F2 904 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Nup93Q8BJ71 819 aaKnown RBP12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 HnrnplQ8R081 586 aaKnown RBP12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Serbp1Q9CY58 407 aaKnown RBP12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 EcsitQ9QZH6 435 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Morf4l2Q9R0Q4 288 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Apobec2Q9WV35 224 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Pck1Q9Z2V4 622 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Unc13cQ8K0T7 2210 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Gm27029A2A4P4 543 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Rsrc2A2RTL5 376 aaKnown RBP12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Siah3B2RWG3 268 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Hnrnph3D3Z3N4 346 aaKnown RBP12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Abhd12bG3UZN6 359 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Pgk1P09411 417 aaKnown RBP12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Dok6Q2MHE5 331 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Gpatch4Q3TFK5 415 aaKnown RBP12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Mif4gdQ3UBZ5 222 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Nat9Q3UG98 241 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Gpd1lQ3ULJ0 351 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Pfdn4Q3UWL8 134 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Mkrn3Q60764 544 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Znf821Q6PD05 413 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Far2Q7TNT2 515 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Fam185aQ7TPD2 378 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Pyhin1Q8BV49 420 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Acsf2Q8VCW8 615 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Anks3Q9CZK6 655 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Egfl7Q9QXT5 275 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Slc25a13Q9QXX4 676 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Pdcd7Q9WTY1 482 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 4933424G06RikA0A140LIP3 267 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Kng1O08677 661 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Cxcr3O88410 367 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 ChrngP04760 519 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Scarf2P59222 833 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Rpl22P67984 128 aaKnown RBP12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Slc30a9Q5IRJ6 567 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Slc13a5Q67BT3 572 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Fam149b1Q6NSV7 578 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Olfr26Q7TRB7 308 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Ppp1r12bQ8BG95 976 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Ankrd52Q8BTI7 1076 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Gm42417Q8K1D0 126 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Fbxo21Q8VDH1 627 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Ddi1Q9DAF3 408 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 HaghlQ9DB32 283 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Olfr933Q9EQA0 308 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Nfu1Q9QZ23 255 aa12.32□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Gbp4A4UUI3 631 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 2210016F16RikG3X8U3 338 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Shoc2O88520 582 aaKnown RBP12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Kcnn4O89109 425 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 E2f5Q61502 335 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Vipas39Q8BGQ1 491 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Kcns3Q8BQZ8 491 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Pth2rQ91V95 546 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Zkscan3Q91VW9 553 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Decr1Q9CQ62 335 aaKnown RBP12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Mtif3Q9CZD5 276 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Gm44511A0A0N4SW10 223 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 PdgfrbP05622 1098 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Klrb1bP27812 223 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Hspa4lP48722 838 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Smpdl3aP70158 445 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 OgdhQ60597 1023 aaKnown RBP12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 ScinQ60604 715 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Podnl1Q6P3Y9 559 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Il33Q8BVZ5 266 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Abi3Q8BYZ1 367 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Vps37aQ8CHS8 397 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Ly6kQ9CWP4 154 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Smok2bQ9QYZ3 484 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Smok2aQ9QYZ6 504 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 PtsQ9R1Z7 144 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Padi3Q9Z184 664 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Zfp811A0A0J9YU71 552 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 A930018M24RikB7ZMY3 218 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Ddx43D3Z6P9 646 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 H2-T24F8VQG4 363 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 PdynO35417 248 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Wnt6P22727 364 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 ItgalP24063 1163 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 H2afxP27661 143 aaKnown RBP12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Gjb3P28231 270 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Sash1P59808 1230 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Il1rapl1P59823 695 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Sco1Q5SUC9 284 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Khdrbs1Q60749 443 aaKnown RBP12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Gstt1Q64471 240 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Gabra5Q8BHJ7 463 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Fcho1Q8K285 873 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Olfr784Q8VFZ9 319 aa12.31□□□□□ -0.44
Ctr9-201ENSMUST00000005749 Adcy4Q91WF3 1077 aa12.31□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 19.3 ms