RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Mtnr1aQ61184 353 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Ndrg1Q62433 394 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 DcstampQ7TNJ0 470 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 PimregQ8BFY7 231 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Ptk7Q8BKG3 1062 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Tmc7Q8C428 726 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Mamdc2Q8CG85 686 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Irak3Q8K4B2 609 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Ambra1A2AH22 1300 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Gm28168A0A087WNP1 180 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Nfx1B1AY10 1114 aaKnown RBP13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 TriqkB2B9E1 86 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Cyp2j12G3UXT0 502 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Sat1P48026 171 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Rfx2P48379 717 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Kcnq1P97414 668 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Pcnx4Q3UVY5 1174 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Fam198aQ3UY90 562 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Abi3bpQ59IW6 1179 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Gdpd5Q640M6 607 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Gpd2Q64521 727 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 ProcrQ64695 242 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Chsy1Q6ZQ11 800 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Q80Y73 168 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Thoc5Q8BKT7 683 aaKnown RBP13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Fbxl5Q8C2S5 690 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 DnerQ8JZM4 737 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Kctd15Q8K0E1 283 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Col23a1Q8K4G2 532 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 ZwilchQ8R060 589 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Dctn2Q99KJ8 402 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Cab39lQ9DB16 337 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 LactbQ9EP89 551 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Cntnap4Q99P47 1310 aa13.03□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Osbpl8B9EJ86 889 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Olfr726E9Q8X3 321 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Scarf2P59222 833 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Olfr725Q05A45 321 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Il33Q8BVZ5 266 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Armcx6Q8K3A6 301 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Tbc1d22aQ8R5A6 516 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 BsndQ8VIM4 307 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 IrgqQ8VIM9 583 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Rtfdc1Q99K95 307 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 St7Q99M96 577 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Pou5f2Q9DAC9 329 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 NvlQ9DBY8 855 aaKnown RBP13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 GmprQ9DCZ1 345 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 PorcnQ9JJJ7 461 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Pdzd8B9EJ80 1147 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Cd70O55237 195 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Stra6O70491 670 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Cdk7Q03147 346 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Krt2Q3TTY5 707 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Rnf180Q3U827 592 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Afap1l2Q5DTU0 825 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Rnf145Q5SWK7 663 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Six1Q62231 284 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Tpd52Q62393 224 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Kiaa1841Q68FF0 718 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Podnl1Q6P3Y9 559 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Rd3Q8BRE0 195 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Nlrp4bQ8C6J9 863 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Rab36Q8CAM5 267 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Nudt13Q8JZU0 352 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Spon1Q8VCC9 807 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Snx9Q91VH2 595 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 GarsQ9CZD3 729 aaKnown RBP13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Cpsf3Q9QXK7 684 aa13.02□□□□□ -0.32
Clcn3-201ENSMUST00000004430 Tsc2Q61037 1814 aa13.02□□□□□ -0.33
Clcn3-201ENSMUST00000004430 A0A1Y7VP24 259 aa13.02□□□□□ -0.33
Clcn3-201ENSMUST00000004430 MipepA6H611 711 aa13.02□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Gm8237E9Q257 205 aa13.02□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Zscan4bE9Q3G0 505 aa13.02□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Il2rbP16297 539 aa13.02□□□□□ -0.33
Clcn3-201ENSMUST00000004430 C2P21180 760 aa13.02□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Lta4hP24527 611 aa13.02□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Plk2P53351 682 aa13.02□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Dsc2P55292 902 aa13.02□□□□□ -0.33
Clcn3-201ENSMUST00000004430 NyxP83503 476 aa13.02□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Nt5c2Q3V1L4 560 aa13.02□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Trappc3lQ4KL14 181 aa13.02□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Rbbp7Q60973 425 aaKnown RBP13.02□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Pcdh20Q8BIZ0 952 aa13.02□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Tmem154Q8C4Q9 181 aa13.02□□□□□ -0.33
Clcn3-201ENSMUST00000004430 P2yr13Q9D8I2 337 aa13.02□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Dcun1d1Q9QZ73 259 aa13.02□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Mtx3D3YTP3 312 aa13.02□□□□□ -0.33
Clcn3-201ENSMUST00000004430 CrymO54983 313 aa13.02□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Traf2P39429 501 aa13.02□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Coq10bQ3THF9 240 aa13.02□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Plcl1Q3USB7 1096 aa13.02□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Gm5414Q6IFZ8 552 aa13.02□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Tfb1mQ8JZM0 345 aaKnown RBP13.02□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Angel2Q8K1C0 544 aa13.02□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Olfr393Q8VGR6 312 aa13.02□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Pcdhga4Q91XY4 930 aa13.02□□□□□ -0.33
Clcn3-201ENSMUST00000004430 PdgfdQ925I7 370 aa13.02□□□□□ -0.33
Clcn3-201ENSMUST00000004430 Q9D9D9 101 aa13.02□□□□□ -0.33
Clcn3-201ENSMUST00000004430 KelQ9EQF2 713 aa13.02□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 38.4 ms