RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Podxl2Q8CAE9 603 aa16.83■□□□□ 0.29
Shh-201ENSMUST00000002708 Unc45bQ8CGY6 931 aaKnown RBP16.83■□□□□ 0.29
Shh-201ENSMUST00000002708 Prpf39Q8K2Z2 665 aa16.83■□□□□ 0.29
Shh-201ENSMUST00000002708 Fubp1Q91WJ8 651 aaKnown RBP16.83■□□□□ 0.29
Shh-201ENSMUST00000002708 Pcdhb18Q91Y02 792 aa16.83■□□□□ 0.29
Shh-201ENSMUST00000002708 Pex6Q99LC9 981 aa16.83■□□□□ 0.29
Shh-201ENSMUST00000002708 KlbQ99N32 1043 aa16.83■□□□□ 0.29
Shh-201ENSMUST00000002708 Cul3Q9JLV5 768 aa16.83■□□□□ 0.29
Shh-201ENSMUST00000002708 Hey2Q9QUS4 339 aa16.83■□□□□ 0.29
Shh-201ENSMUST00000002708 Gm21731A0A286YDE9 180 aa16.83■□□□□ 0.28
Shh-201ENSMUST00000002708 FaahO08914 579 aa16.83■□□□□ 0.28
Shh-201ENSMUST00000002708 Pim1P06803 397 aa16.83■□□□□ 0.28
Shh-201ENSMUST00000002708 Zfy2P20662 777 aa16.83■□□□□ 0.28
Shh-201ENSMUST00000002708 Prim2P33610 505 aa16.83■□□□□ 0.28
Shh-201ENSMUST00000002708 Grid2ipQ0QWG9 1203 aa16.83■□□□□ 0.28
Shh-201ENSMUST00000002708 Samd11Q1RNF8 542 aa16.83■□□□□ 0.28
Shh-201ENSMUST00000002708 B3gntl1Q3U129 357 aa16.83■□□□□ 0.28
Shh-201ENSMUST00000002708 Ckap2lQ7TS74 745 aa16.83■□□□□ 0.28
Shh-201ENSMUST00000002708 Tspan18Q80WR1 248 aa16.83■□□□□ 0.28
Shh-201ENSMUST00000002708 Mkl1Q8K4J6 964 aa16.83■□□□□ 0.28
Shh-201ENSMUST00000002708 Ndufaf1Q9CWX2 328 aa16.83■□□□□ 0.28
Shh-201ENSMUST00000002708 Polr3eQ9CZT4 710 aa16.83■□□□□ 0.28
Shh-201ENSMUST00000002708 Actrt2Q9D9L5 377 aa16.83■□□□□ 0.28
Shh-201ENSMUST00000002708 Cpxm1Q9Z100 722 aa16.83■□□□□ 0.28
Shh-201ENSMUST00000002708 Olfr1354E9Q5G9 310 aa16.83■□□□□ 0.28
Shh-201ENSMUST00000002708 Gm10719E9Q7T3 227 aa16.83■□□□□ 0.28
Shh-201ENSMUST00000002708 Tmprss15P97435 1069 aa16.83■□□□□ 0.28
Shh-201ENSMUST00000002708 Ag2Q3UPL5 249 aa16.83■□□□□ 0.28
Shh-201ENSMUST00000002708 Pgm2l1Q8CAA7 621 aa16.83■□□□□ 0.28
Shh-201ENSMUST00000002708 Panx3Q8CEG0 392 aa16.83■□□□□ 0.28
Shh-201ENSMUST00000002708 Pacs1Q8K212 961 aa16.83■□□□□ 0.28
Shh-201ENSMUST00000002708 Tbc1d13Q8R3D1 400 aa16.83■□□□□ 0.28
Shh-201ENSMUST00000002708 Olfr356Q8VFP5 315 aa16.83■□□□□ 0.28
Shh-201ENSMUST00000002708 Lpin1Q91ZP3 924 aa16.83■□□□□ 0.28
Shh-201ENSMUST00000002708 FdpsQ920E5 353 aa16.83■□□□□ 0.28
Shh-201ENSMUST00000002708 Dcp2Q9CYC6 422 aa16.83■□□□□ 0.28
Shh-201ENSMUST00000002708 Atg7Q9D906 698 aa16.83■□□□□ 0.28
Shh-201ENSMUST00000002708 Cab39lQ9DB16 337 aa16.83■□□□□ 0.28
Shh-201ENSMUST00000002708 Dach1Q9QYB2 751 aa16.83■□□□□ 0.28
Shh-201ENSMUST00000002708 Morc1Q9WVL5 950 aa16.83■□□□□ 0.28
Shh-201ENSMUST00000002708 Gm10720D3Z1I5 223 aa16.82■□□□□ 0.28
Shh-201ENSMUST00000002708 Olfr600E9PUN7 314 aa16.82■□□□□ 0.28
Shh-201ENSMUST00000002708 Abhd12bG3UZN6 359 aa16.82■□□□□ 0.28
Shh-201ENSMUST00000002708 Ndrg1Q62433 394 aa16.82■□□□□ 0.28
Shh-201ENSMUST00000002708 Sh3kbp1Q8R550 709 aaKnown RBP16.82■□□□□ 0.28
Shh-201ENSMUST00000002708 Arpc2Q9CVB6 300 aa16.82■□□□□ 0.28
Shh-201ENSMUST00000002708 Gfra4Q9JJT2 260 aa16.82■□□□□ 0.28
Shh-201ENSMUST00000002708 Btbd19S4R1I0 287 aa16.82■□□□□ 0.28
Shh-201ENSMUST00000002708 Rabgap1lA6H6A9 815 aa16.82■□□□□ 0.28
Shh-201ENSMUST00000002708 Gm15155B1B034 138 aa16.82■□□□□ 0.28
Shh-201ENSMUST00000002708 JchainP01592 159 aa16.82■□□□□ 0.28
Shh-201ENSMUST00000002708 Q14AM7 275 aa16.82■□□□□ 0.28
Shh-201ENSMUST00000002708 CblbQ3TTA7 982 aa16.82■□□□□ 0.28
Shh-201ENSMUST00000002708 Adrbk2Q3UYH7 688 aa16.82■□□□□ 0.28
Shh-201ENSMUST00000002708 Pdp2Q504M2 532 aa16.82■□□□□ 0.28
Shh-201ENSMUST00000002708 Tpd52Q62393 224 aa16.82■□□□□ 0.28
Shh-201ENSMUST00000002708 EfsQ64355 560 aa16.82■□□□□ 0.28
Shh-201ENSMUST00000002708 DstykQ6XUX1 927 aa16.82■□□□□ 0.28
Shh-201ENSMUST00000002708 Ppm1lQ8BHN0 360 aa16.82■□□□□ 0.28
Shh-201ENSMUST00000002708 Lin52Q8CD94 116 aa16.82■□□□□ 0.28
Shh-201ENSMUST00000002708 Agap3Q8VHH5 910 aa16.82■□□□□ 0.28
Shh-201ENSMUST00000002708 Rnh1Q91VI7 456 aa16.82■□□□□ 0.28
Shh-201ENSMUST00000002708 GarsQ9CZD3 729 aaKnown RBP16.82■□□□□ 0.28
Shh-201ENSMUST00000002708 Jph2Q9ET78 696 aa16.82■□□□□ 0.28
Shh-201ENSMUST00000002708 Trpm5Q9JJH7 1158 aa16.82■□□□□ 0.28
Shh-201ENSMUST00000002708 Stk32bQ9JJX8 414 aa16.82■□□□□ 0.28
Shh-201ENSMUST00000002708 PignQ9R1S3 931 aa16.82■□□□□ 0.28
Shh-201ENSMUST00000002708 LctF8VPT3 1931 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 Wfdc16A2A5H4 111 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 Ptpn9O35239 593 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 Tap2P36371 702 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 Mcm9Q2KHI9 1134 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 Kcna4Q61423 654 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 Pde1aQ61481 565 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 Znf512Q69Z99 562 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 Olfr1057Q7TR75 315 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 Mettl21cQ8BLU2 248 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 MyocdQ8VIM5 935 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 Mrps17Q9CQE3 120 aaKnown RBP16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 IcmtQ9EQK7 283 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 Fbxo16Q9QZM9 334 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 Osbpl8B9EJ86 889 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 Ces1bD3Z5G7 567 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 Ptpn20O55082 426 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 Hcn4O70507 1186 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 CblP22682 913 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 Igfbp4P47879 254 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 Ikzf1Q03267 517 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 Zbtb48Q1H9T6 681 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 Fam91a1Q3UVG3 837 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 Zfp658Q5PPQ4 887 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 Heatr9Q5QNV8 569 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 Ccdc154Q6RUT8 657 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 Clec4b1Q7TS58 209 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 Zdhhc17Q80TN5 632 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 Pyhin1Q8BV49 420 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 Plin5Q8BVZ1 463 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 Clic5Q8BXK9 251 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 Ttc30a1Q99J38 664 aa16.81■□□□□ 0.28
Shh-201ENSMUST00000002708 GsdmcQ99NB5 468 aa16.81■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 41.8 ms