RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 SPATA13Q96N96 652 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 OLFM3Q96PB7 478 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 TUBGCP5Q96RT8 1024 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 OXCT2Q9BYC2 517 aaPredicted RBP14.22□□□□□ -0.13
PHGDH-233ENST00000642021 TUBGCP4Q9UGJ1 667 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 GJD2Q9UKL4 321 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 APOBEC2Q9Y235 224 aaKnown RBP14.22□□□□□ -0.13
PHGDH-233ENST00000642021 DNAJC25-GNG10A0A024R161 153 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 ZNF487B1APH4 448 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 CNTFP26441 200 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 ADORA2BP29275 332 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 PAPOLAP51003 745 aaKnown RBP14.22□□□□□ -0.13
PHGDH-233ENST00000642021 EPHB1P54762 984 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 PITX1P78337 314 aaPredicted RBP14.22□□□□□ -0.13
PHGDH-233ENST00000642021 DSG1Q02413 1049 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 HIC1Q14526 733 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 GLRA4Q5JXX5 417 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 STXBP5Q5T5C0 1151 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 CMC1Q7Z7K0 106 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 NLRP7Q8WX94 980 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 S100A14Q9HCY8 104 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 SYBUQ9NX95 663 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 HES2Q9Y543 173 aa14.22□□□□□ -0.13
PHGDH-233ENST00000642021 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.21□□□□□ -0.13
PHGDH-233ENST00000642021 ANKRD33BA6NCL7 494 aa14.21□□□□□ -0.13
PHGDH-233ENST00000642021 MFSD11O43934 449 aa14.21□□□□□ -0.13
PHGDH-233ENST00000642021 COQ9O75208 318 aa14.21□□□□□ -0.13
PHGDH-233ENST00000642021 GLRA3O75311 464 aa14.21□□□□□ -0.13
PHGDH-233ENST00000642021 ZMPSTE24O75844 475 aa14.21□□□□□ -0.13
PHGDH-233ENST00000642021 LGALS2P05162 132 aa14.21□□□□□ -0.13
PHGDH-233ENST00000642021 LMO2P25791 158 aa14.21□□□□□ -0.13
PHGDH-233ENST00000642021 LRRC8BQ6P9F7 803 aa14.21□□□□□ -0.13
PHGDH-233ENST00000642021 TNS4Q8IZW8 715 aa14.21□□□□□ -0.13
PHGDH-233ENST00000642021 PHTF2Q8N3S3 785 aa14.21□□□□□ -0.13
PHGDH-233ENST00000642021 EBF3Q9H4W6 596 aa14.21□□□□□ -0.13
PHGDH-233ENST00000642021 CYP4F11Q9HBI6 524 aa14.21□□□□□ -0.13
PHGDH-233ENST00000642021 GPAMQ9HCL2 828 aa14.21□□□□□ -0.13
PHGDH-233ENST00000642021 MORF4L1Q9UBU8 362 aa14.21□□□□□ -0.13
PHGDH-233ENST00000642021 GTF2IRD1Q9UHL9 959 aa14.21□□□□□ -0.13
PHGDH-233ENST00000642021 WDR90Q96KV7 1748 aa14.21□□□□□ -0.13
PHGDH-233ENST00000642021 MCM3APO60318 1980 aa14.21□□□□□ -0.14
PHGDH-233ENST00000642021 SERPINE1P05121 402 aa14.21□□□□□ -0.14
PHGDH-233ENST00000642021 ZNF286BP0CG31 522 aa14.21□□□□□ -0.14
PHGDH-233ENST00000642021 ZFXP17010 805 aaPredicted RBP14.21□□□□□ -0.14
PHGDH-233ENST00000642021 ITGA9Q13797 1035 aa14.21□□□□□ -0.14
PHGDH-233ENST00000642021 EFHC1Q5JVL4 640 aa14.21□□□□□ -0.14
PHGDH-233ENST00000642021 SLC26A9Q7LBE3 791 aa14.21□□□□□ -0.14
PHGDH-233ENST00000642021 PLD6Q8N2A8 252 aaKnown RBP14.21□□□□□ -0.14
PHGDH-233ENST00000642021 ACMSDQ8TDX5 336 aa14.21□□□□□ -0.14
PHGDH-233ENST00000642021 CCDC124Q96CT7 223 aaKnown RBP14.21□□□□□ -0.14
PHGDH-233ENST00000642021 OTUD5Q96G74 571 aa14.21□□□□□ -0.14
PHGDH-233ENST00000642021 P2RY11Q96G91 374 aa14.21□□□□□ -0.14
PHGDH-233ENST00000642021 GCOM2Q9BZD3 368 aaPredicted RBP14.21□□□□□ -0.14
PHGDH-233ENST00000642021 SNTG2Q9NY99 539 aa14.21□□□□□ -0.14
PHGDH-233ENST00000642021 COPG2Q9UBF2 871 aa14.21□□□□□ -0.14
PHGDH-233ENST00000642021 SORCS3Q9UPU3 1222 aa14.21□□□□□ -0.14
PHGDH-233ENST00000642021 A0A0G2JMZ2 1700 aa14.21□□□□□ -0.14
PHGDH-233ENST00000642021 LRRC37A2A6NM11 1700 aa14.21□□□□□ -0.14
PHGDH-233ENST00000642021 RNF103O00237 685 aa14.2□□□□□ -0.14
PHGDH-233ENST00000642021 RNASEH1O60930 286 aaKnown RBP14.2□□□□□ -0.14
PHGDH-233ENST00000642021 ATP5BP06576 529 aaKnown RBP14.2□□□□□ -0.14
PHGDH-233ENST00000642021 SETSIPP0DME0 302 aa14.2□□□□□ -0.14
PHGDH-233ENST00000642021 PSMB4P28070 264 aa14.2□□□□□ -0.14
PHGDH-233ENST00000642021 ARHGAP1Q07960 439 aa14.2□□□□□ -0.14
PHGDH-233ENST00000642021 USP4Q13107 963 aa14.2□□□□□ -0.14
PHGDH-233ENST00000642021 CCNIQ14094 377 aa14.2□□□□□ -0.14
PHGDH-233ENST00000642021 ZNF484Q5JVG2 852 aa14.2□□□□□ -0.14
PHGDH-233ENST00000642021 ZNF618Q5T7W0 954 aa14.2□□□□□ -0.14
PHGDH-233ENST00000642021 LPCAT4Q643R3 524 aa14.2□□□□□ -0.14
PHGDH-233ENST00000642021 PGM2L1Q6PCE3 622 aa14.2□□□□□ -0.14
PHGDH-233ENST00000642021 APLFQ8IW19 511 aaPredicted RBP14.2□□□□□ -0.14
PHGDH-233ENST00000642021 HIPK4Q8NE63 616 aa14.2□□□□□ -0.14
PHGDH-233ENST00000642021 AZIN2Q96A70 460 aa14.2□□□□□ -0.14
PHGDH-233ENST00000642021 MOCOSQ96EN8 888 aa14.2□□□□□ -0.14
PHGDH-233ENST00000642021 ATXN7L3BQ96GX2 97 aa14.2□□□□□ -0.14
PHGDH-233ENST00000642021 FCRL3Q96P31 734 aaPredicted RBP14.2□□□□□ -0.14
PHGDH-233ENST00000642021 MAN1C1Q9NR34 630 aa14.2□□□□□ -0.14
PHGDH-233ENST00000642021 GPRC5DQ9NZD1 345 aa14.2□□□□□ -0.14
PHGDH-233ENST00000642021 DNAJB4Q9UDY4 337 aa14.2□□□□□ -0.14
PHGDH-233ENST00000642021 DCDC2Q9UHG0 476 aa14.2□□□□□ -0.14
PHGDH-233ENST00000642021 ADAMTS6Q9UKP5 1117 aa14.2□□□□□ -0.14
PHGDH-233ENST00000642021 KLHL2O95198 593 aa14.2□□□□□ -0.14
PHGDH-233ENST00000642021 MLNP12872 115 aa14.2□□□□□ -0.14
PHGDH-233ENST00000642021 TYK2P29597 1187 aa14.2□□□□□ -0.14
PHGDH-233ENST00000642021 COPAP53621 1224 aa14.2□□□□□ -0.14
PHGDH-233ENST00000642021 KCTD2Q14681 263 aa14.2□□□□□ -0.14
PHGDH-233ENST00000642021 GSTA3Q16772 222 aa14.2□□□□□ -0.14
PHGDH-233ENST00000642021 TTC39CQ8N584 583 aa14.2□□□□□ -0.14
PHGDH-233ENST00000642021 AFG1LQ8WV93 481 aa14.2□□□□□ -0.14
PHGDH-233ENST00000642021 CDKL2Q92772 493 aa14.2□□□□□ -0.14
PHGDH-233ENST00000642021 NR1H4Q96RI1 486 aaPredicted RBP14.2□□□□□ -0.14
PHGDH-233ENST00000642021 ELP3Q9H9T3 547 aa14.2□□□□□ -0.14
PHGDH-233ENST00000642021 SEPT10Q9P0V9 454 aa14.2□□□□□ -0.14
PHGDH-233ENST00000642021 RALBP11234 206 aa14.19□□□□□ -0.14
PHGDH-233ENST00000642021 NCF2P19878 526 aaPredicted RBP14.19□□□□□ -0.14
PHGDH-233ENST00000642021 FDFT1P37268 417 aa14.19□□□□□ -0.14
PHGDH-233ENST00000642021 ABCG1P45844 678 aa14.19□□□□□ -0.14
PHGDH-233ENST00000642021 TTLL4Q14679 1199 aa14.19□□□□□ -0.14
PHGDH-233ENST00000642021 SFT2D3Q587I9 215 aa14.19□□□□□ -0.14
PHGDH-233ENST00000642021 PDPK2PQ6A1A2 396 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms