RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 XAB2Q9HCS7 855 aaKnown RBP10.03□□□□□ -0.8
PHGDH-215ENST00000641371 PSD3Q9NYI0 1048 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 COX16Q9P0S2 106 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 GMIPQ9P107 970 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 CALCOCO1Q9P1Z2 691 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 PPARGC1AQ9UBK2 798 aaKnown RBP10.03□□□□□ -0.8
PHGDH-215ENST00000641371 NFS1Q9Y697 457 aa10.03□□□□□ -0.8
PHGDH-215ENST00000641371 A0A087WUV0 522 aaPredicted RBP10.02□□□□□ -0.81
PHGDH-215ENST00000641371 KCNU1A8MYU2 1149 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 E7ESA3 106 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 ALOX15BO15296 676 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 TP73O15350 636 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 LRIG2O94898 1065 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 LATS1O95835 1130 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 CTSAP10619 480 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 MLNP12872 115 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 RBL1P28749 1068 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 MAGEA4P43358 317 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 EPHB3P54753 998 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 MLLT6P55198 1093 aaPredicted RBP10.02□□□□□ -0.81
PHGDH-215ENST00000641371 PITX1P78337 314 aaPredicted RBP10.02□□□□□ -0.81
PHGDH-215ENST00000641371 BASP1P80723 227 aaKnown RBP10.02□□□□□ -0.81
PHGDH-215ENST00000641371 DEFB103AP81534 67 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 GBE1Q04446 702 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 UBE3AQ05086 875 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 PPIDQ08752 370 aaKnown RBP10.02□□□□□ -0.81
PHGDH-215ENST00000641371 GALNT2Q10471 571 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 IFRD2Q12894 506 aaPredicted RBP10.02□□□□□ -0.81
PHGDH-215ENST00000641371 TAF10Q12962 218 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 NR1H3Q13133 447 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 SEMA5AQ13591 1074 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 ANO4Q32M45 955 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 KRT71Q3SY84 523 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 PABPC1LQ4VXU2 614 aaKnown RBP10.02□□□□□ -0.81
PHGDH-215ENST00000641371 RAB6CQ53S08 254 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 EMC10Q5UCC4 262 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 MANEALQ5VSG8 457 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 NPNTQ6UXI9 565 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 CCDC149Q6ZUS6 474 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 TAOK1Q7L7X3 1001 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 TMEM173Q86WV6 379 aaPredicted RBP10.02□□□□□ -0.81
PHGDH-215ENST00000641371 CCNJLQ8IV13 435 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 TCEAL8Q8IYN2 117 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 ATP11CQ8NB49 1132 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 BCL7CQ8WUZ0 217 aaPredicted RBP10.02□□□□□ -0.81
PHGDH-215ENST00000641371 CPT1BQ92523 772 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 CASP10Q92851 521 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 CLP1Q92989 425 aaKnown RBP10.02□□□□□ -0.81
PHGDH-215ENST00000641371 PLD4Q96BZ4 506 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 TSGA13Q96PP4 275 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 FAM118BQ9BPY3 351 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 DDX50Q9BQ39 737 aaKnown RBP10.02□□□□□ -0.81
PHGDH-215ENST00000641371 HTATIP2Q9BUP3 242 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 RAB6CQ9H0N0 254 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 RAB6BQ9NRW1 208 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 TRPM5Q9NZQ8 1165 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 MARCH2Q9P0N8 246 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 VPS18Q9P253 973 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 IGSF9Q9P2J2 1179 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 SAE1Q9UBE0 346 aaPredicted RBP10.02□□□□□ -0.81
PHGDH-215ENST00000641371 DNMT3LQ9UJW3 386 aa10.02□□□□□ -0.81
PHGDH-215ENST00000641371 MRPL42Q9Y6G3 142 aaKnown RBP10.02□□□□□ -0.81
PHGDH-215ENST00000641371 ZBBXA8MT70 800 aa10.01□□□□□ -0.81
PHGDH-215ENST00000641371 E7EVH7 732 aa10.01□□□□□ -0.81
PHGDH-215ENST00000641371 H3BQF6 201 aa10.01□□□□□ -0.81
PHGDH-215ENST00000641371 RASGRF2O14827 1237 aa10.01□□□□□ -0.81
PHGDH-215ENST00000641371 MFSD11O43934 449 aa10.01□□□□□ -0.81
PHGDH-215ENST00000641371 TLR5O60602 858 aa10.01□□□□□ -0.81
PHGDH-215ENST00000641371 PAGE1O75459 146 aa10.01□□□□□ -0.81
PHGDH-215ENST00000641371 FGF19O95750 216 aa10.01□□□□□ -0.81
PHGDH-215ENST00000641371 AGTP01019 485 aa10.01□□□□□ -0.81
PHGDH-215ENST00000641371 IGLV3-27P01718 113 aa10.01□□□□□ -0.81
PHGDH-215ENST00000641371 RHOQP17081 205 aa10.01□□□□□ -0.81
PHGDH-215ENST00000641371 ATP5C1P36542 298 aaKnown RBP10.01□□□□□ -0.81
PHGDH-215ENST00000641371 NDST2P52849 883 aa10.01□□□□□ -0.81
PHGDH-215ENST00000641371 GDF10P55107 478 aa10.01□□□□□ -0.81
PHGDH-215ENST00000641371 CBX1P83916 185 aa10.01□□□□□ -0.81
PHGDH-215ENST00000641371 ZNF844Q08AG5 666 aa10.01□□□□□ -0.81
PHGDH-215ENST00000641371 SLC29A2Q14542 456 aa10.01□□□□□ -0.81
PHGDH-215ENST00000641371 KCNJ11Q14654 390 aa10.01□□□□□ -0.81
PHGDH-215ENST00000641371 PARP6Q2NL67 630 aa10.01□□□□□ -0.81
PHGDH-215ENST00000641371 KLHL38Q2WGJ6 581 aa10.01□□□□□ -0.81
PHGDH-215ENST00000641371 C10orf120Q5SQS8 335 aa10.01□□□□□ -0.81
PHGDH-215ENST00000641371 HECTD3Q5T447 861 aa10.01□□□□□ -0.81
PHGDH-215ENST00000641371 PRSS55Q6UWB4 352 aaPredicted RBP10.01□□□□□ -0.81
PHGDH-215ENST00000641371 PYROXD2Q8N2H3 581 aa10.01□□□□□ -0.81
PHGDH-215ENST00000641371 ADAM32Q8TC27 787 aa10.01□□□□□ -0.81
PHGDH-215ENST00000641371 SP7Q8TDD2 431 aaPredicted RBP10.01□□□□□ -0.81
PHGDH-215ENST00000641371 PYROXD1Q8WU10 500 aa10.01□□□□□ -0.81
PHGDH-215ENST00000641371 HERVK_113Q902F9 699 aa10.01□□□□□ -0.81
PHGDH-215ENST00000641371 FCRL2Q96LA5 508 aaPredicted RBP10.01□□□□□ -0.81
PHGDH-215ENST00000641371 SAMD11Q96NU1 681 aa10.01□□□□□ -0.81
PHGDH-215ENST00000641371 RAD9AQ99638 391 aa10.01□□□□□ -0.81
PHGDH-215ENST00000641371 CLSTN3Q9BQT9 956 aa10.01□□□□□ -0.81
PHGDH-215ENST00000641371 NAT9Q9BTE0 207 aa10.01□□□□□ -0.81
PHGDH-215ENST00000641371 ZBED2Q9BTP6 218 aa10.01□□□□□ -0.81
PHGDH-215ENST00000641371 EMILIN2Q9BXX0 1053 aa10.01□□□□□ -0.81
PHGDH-215ENST00000641371 SEMA4AQ9H3S1 761 aa10.01□□□□□ -0.81
PHGDH-215ENST00000641371 CNOT10Q9H9A5 744 aaKnown RBP10.01□□□□□ -0.81
PHGDH-215ENST00000641371 NMUR1Q9HB89 426 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms