RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 SETD7Q8WTS6 366 aaKnown RBP17.36■□□□□ 0.37
PHGDH-213ENST00000641272 IRGQQ8WZA9 623 aa17.36■□□□□ 0.37
PHGDH-213ENST00000641272 DHTKD1Q96HY7 919 aaPredicted RBP17.36■□□□□ 0.37
PHGDH-213ENST00000641272 FCRL2Q96LA5 508 aaPredicted RBP17.36■□□□□ 0.37
PHGDH-213ENST00000641272 KREMEN1Q96MU8 473 aa17.36■□□□□ 0.37
PHGDH-213ENST00000641272 NUCKS1Q9H1E3 243 aaKnown RBP17.36■□□□□ 0.37
PHGDH-213ENST00000641272 PRSS16Q9NQE7 514 aa17.36■□□□□ 0.37
PHGDH-213ENST00000641272 HOOK1Q9UJC3 728 aaKnown RBP17.36■□□□□ 0.37
PHGDH-213ENST00000641272 KIAA1257Q9ULG3 409 aa17.36■□□□□ 0.37
PHGDH-213ENST00000641272 PLA2G4CQ9UP65 541 aa17.36■□□□□ 0.37
PHGDH-213ENST00000641272 WDFY3Q8IZQ1 3526 aa17.35■□□□□ 0.37
PHGDH-213ENST00000641272 SRRM3A6NNA2 597 aaPredicted RBP17.35■□□□□ 0.37
PHGDH-213ENST00000641272 TIMM44O43615 452 aa17.35■□□□□ 0.37
PHGDH-213ENST00000641272 FSBPO95073 299 aa17.35■□□□□ 0.37
PHGDH-213ENST00000641272 SEMA4FO95754 770 aa17.35■□□□□ 0.37
PHGDH-213ENST00000641272 CER1O95813 267 aa17.35■□□□□ 0.37
PHGDH-213ENST00000641272 DNTTP04053 509 aa17.35■□□□□ 0.37
PHGDH-213ENST00000641272 DLDP09622 509 aaKnown RBP17.35■□□□□ 0.37
PHGDH-213ENST00000641272 KRT5P13647 590 aa17.35■□□□□ 0.37
PHGDH-213ENST00000641272 POLR2EP19388 210 aaKnown RBP17.35■□□□□ 0.37
PHGDH-213ENST00000641272 CSNK1EP49674 416 aaKnown RBP17.35■□□□□ 0.37
PHGDH-213ENST00000641272 SLC14A1Q13336 389 aa17.35■□□□□ 0.37
PHGDH-213ENST00000641272 ZNF423Q2M1K9 1284 aa17.35■□□□□ 0.37
PHGDH-213ENST00000641272 HLA-BQ31612 363 aa17.35■□□□□ 0.37
PHGDH-213ENST00000641272 DENND1BQ6P3S1 775 aa17.35■□□□□ 0.37
PHGDH-213ENST00000641272 MMS22LQ6ZRQ5 1243 aa17.35■□□□□ 0.37
PHGDH-213ENST00000641272 RAB44Q7Z6P3 723 aaPredicted RBP17.35■□□□□ 0.37
PHGDH-213ENST00000641272 KIAA0907Q7Z7F0 614 aaPredicted RBP17.35■□□□□ 0.37
PHGDH-213ENST00000641272 TAC4Q86UU9 113 aa17.35■□□□□ 0.37
PHGDH-213ENST00000641272 CFAP52Q8N1V2 620 aa17.35■□□□□ 0.37
PHGDH-213ENST00000641272 TIGD1Q96MW7 591 aa17.35■□□□□ 0.37
PHGDH-213ENST00000641272 ZDHHC5Q9C0B5 715 aa17.35■□□□□ 0.37
PHGDH-213ENST00000641272 INTS2Q9H0H0 1204 aaKnown RBP17.35■□□□□ 0.37
PHGDH-213ENST00000641272 TM7SF3Q9NS93 570 aa17.35■□□□□ 0.37
PHGDH-213ENST00000641272 XPO7Q9UIA9 1087 aaKnown RBP17.35■□□□□ 0.37
PHGDH-213ENST00000641272 NAALADL1Q9UQQ1 740 aa17.35■□□□□ 0.37
PHGDH-213ENST00000641272 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.35■□□□□ 0.37
PHGDH-213ENST00000641272 NFE2L3Q9Y4A8 694 aa17.35■□□□□ 0.37
PHGDH-213ENST00000641272 GTF3C3Q9Y5Q9 886 aa17.35■□□□□ 0.37
PHGDH-213ENST00000641272 GOLGA8CPA6NN73 597 aa17.34■□□□□ 0.37
PHGDH-213ENST00000641272 H0Y626 953 aa17.34■□□□□ 0.37
PHGDH-213ENST00000641272 FBXO21O94952 628 aa17.34■□□□□ 0.37
PHGDH-213ENST00000641272 TRIM16O95361 564 aa17.34■□□□□ 0.37
PHGDH-213ENST00000641272 FYNP06241 537 aa17.34■□□□□ 0.37
PHGDH-213ENST00000641272 RDXP35241 583 aaKnown RBP17.34■□□□□ 0.37
PHGDH-213ENST00000641272 CSKP41240 450 aa17.34■□□□□ 0.37
PHGDH-213ENST00000641272 CDH18Q13634 790 aa17.34■□□□□ 0.37
PHGDH-213ENST00000641272 STILQ15468 1287 aa17.34■□□□□ 0.37
PHGDH-213ENST00000641272 TTC31Q49AM3 519 aaPredicted RBP17.34■□□□□ 0.37
PHGDH-213ENST00000641272 ZNF776Q68DI1 518 aaPredicted RBP17.34■□□□□ 0.37
PHGDH-213ENST00000641272 UNC45BQ8IWX7 931 aa17.34■□□□□ 0.37
PHGDH-213ENST00000641272 DHX40Q8IX18 779 aaKnown RBP17.34■□□□□ 0.37
PHGDH-213ENST00000641272 C1orf216Q8TAB5 229 aa17.34■□□□□ 0.37
PHGDH-213ENST00000641272 SERPINB11Q96P15 392 aa17.34■□□□□ 0.37
PHGDH-213ENST00000641272 BTBD1Q9H0C5 482 aa17.34■□□□□ 0.37
PHGDH-213ENST00000641272 SERGEFQ9UGK8 458 aa17.34■□□□□ 0.37
PHGDH-213ENST00000641272 PCOLCE2Q9UKZ9 415 aa17.34■□□□□ 0.37
PHGDH-213ENST00000641272 INTS6Q9UL03 887 aaKnown RBP17.34■□□□□ 0.37
PHGDH-213ENST00000641272 SPEGQ15772 3267 aa17.34■□□□□ 0.37
PHGDH-213ENST00000641272 FAM208BQ5VWN6 2430 aa17.33■□□□□ 0.37
PHGDH-213ENST00000641272 PTPRBP23467 1997 aa17.33■□□□□ 0.37
PHGDH-213ENST00000641272 TYW5A2RUC4 315 aaKnown RBP17.33■□□□□ 0.36
PHGDH-213ENST00000641272 FAM47DPA6NHR8 397 aa17.33■□□□□ 0.36
PHGDH-213ENST00000641272 PPP1R3GB7ZBB8 358 aa17.33■□□□□ 0.36
PHGDH-213ENST00000641272 ATP5BP06576 529 aaKnown RBP17.33■□□□□ 0.36
PHGDH-213ENST00000641272 CTSOP43234 321 aaPredicted RBP17.33■□□□□ 0.36
PHGDH-213ENST00000641272 IL9RQ01113 521 aa17.33■□□□□ 0.36
PHGDH-213ENST00000641272 GCNT1Q02742 428 aa17.33■□□□□ 0.36
PHGDH-213ENST00000641272 RING1Q06587 406 aa17.33■□□□□ 0.36
PHGDH-213ENST00000641272 CETN1Q12798 172 aa17.33■□□□□ 0.36
PHGDH-213ENST00000641272 KCNH2Q12809 1159 aa17.33■□□□□ 0.36
PHGDH-213ENST00000641272 HNRNPDQ14103 355 aaKnown RBP17.33■□□□□ 0.36
PHGDH-213ENST00000641272 BECN1Q14457 450 aa17.33■□□□□ 0.36
PHGDH-213ENST00000641272 KIF19Q2TAC6 998 aa17.33■□□□□ 0.36
PHGDH-213ENST00000641272 CHSY1Q86X52 802 aa17.33■□□□□ 0.36
PHGDH-213ENST00000641272 TRIM59Q8IWR1 403 aa17.33■□□□□ 0.36
PHGDH-213ENST00000641272 GANCQ8TET4 914 aa17.33■□□□□ 0.36
PHGDH-213ENST00000641272 BIRC7Q96CA5 298 aa17.33■□□□□ 0.36
PHGDH-213ENST00000641272 MYO19Q96H55 970 aa17.33■□□□□ 0.36
PHGDH-213ENST00000641272 HSFY1Q96LI6 401 aa17.33■□□□□ 0.36
PHGDH-213ENST00000641272 GTPBP4Q9BZE4 634 aaKnown RBP17.33■□□□□ 0.36
PHGDH-213ENST00000641272 TM9SF3Q9HD45 589 aa17.33■□□□□ 0.36
PHGDH-213ENST00000641272 ACP6Q9NPH0 428 aa17.33■□□□□ 0.36
PHGDH-213ENST00000641272 TJP2Q9UDY2 1190 aa17.33■□□□□ 0.36
PHGDH-213ENST00000641272 BTBD3Q9Y2F9 522 aa17.33■□□□□ 0.36
PHGDH-213ENST00000641272 SNX11Q9Y5W9 270 aa17.33■□□□□ 0.36
PHGDH-213ENST00000641272 ZZEF1O43149 2961 aa17.33■□□□□ 0.36
PHGDH-213ENST00000641272 PLXNB3Q9ULL4 1909 aa17.33■□□□□ 0.36
PHGDH-213ENST00000641272 PKD1L2Q7Z442 2459 aa17.32■□□□□ 0.36
PHGDH-213ENST00000641272 E5RJQ4 531 aa17.32■□□□□ 0.36
PHGDH-213ENST00000641272 KCNK3O14649 394 aa17.32■□□□□ 0.36
PHGDH-213ENST00000641272 PMM2O15305 246 aa17.32■□□□□ 0.36
PHGDH-213ENST00000641272 IRAK2O43187 625 aa17.32■□□□□ 0.36
PHGDH-213ENST00000641272 CBFA2T3O75081 653 aa17.32■□□□□ 0.36
PHGDH-213ENST00000641272 SIN3BO75182 1162 aa17.32■□□□□ 0.36
PHGDH-213ENST00000641272 AFPP02771 609 aaKnown RBP17.32■□□□□ 0.36
PHGDH-213ENST00000641272 AFF3P51826 1226 aaKnown RBP17.32■□□□□ 0.36
PHGDH-213ENST00000641272 ST8SIA6P61647 398 aa17.32■□□□□ 0.36
PHGDH-213ENST00000641272 PITX1P78337 314 aaPredicted RBP17.32■□□□□ 0.36
PHGDH-213ENST00000641272 NUCB2P80303 420 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms