RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, human

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-231	ENST00000640499	WDCP	Q9H6R7	721 aa		27.64	■■■□□ 2.02
VEGFA-231	ENST00000640499	STIM2	Q9P246	746 aa		27.64	■■■□□ 2.02
VEGFA-231	ENST00000640499	ADAMTS1	Q9UHI8	967 aa		27.64	■■■□□ 2.02
VEGFA-231	ENST00000640499	SNX10	Q9Y5X0	201 aa		27.64	■■■□□ 2.02
VEGFA-231	ENST00000640499	BZW2	Q9Y6E2	419 aa	Known RBP	27.64	■■■□□ 2.02
VEGFA-231	ENST00000640499	SGK1	O00141	431 aa		27.63	■■■□□ 2.01
VEGFA-231	ENST00000640499	ATMIN	O43313	823 aa	Predicted RBP	27.63	■■■□□ 2.01
VEGFA-231	ENST00000640499	ABCB4	P21439	1286 aa		27.63	■■■□□ 2.01
VEGFA-231	ENST00000640499	GGCX	P38435	758 aa		27.63	■■■□□ 2.01
VEGFA-231	ENST00000640499	PTPN9	P43378	593 aa		27.63	■■■□□ 2.01
VEGFA-231	ENST00000640499	IRAK1	P51617	712 aa		27.63	■■■□□ 2.01
VEGFA-231	ENST00000640499	OGDH	Q02218	1023 aa		27.63	■■■□□ 2.01
VEGFA-231	ENST00000640499	MAMLD1	Q13495	774 aa		27.63	■■■□□ 2.01
VEGFA-231	ENST00000640499	PREPL	Q4J6C6	727 aa	Predicted RBP	27.63	■■■□□ 2.01
VEGFA-231	ENST00000640499	BRMS1L	Q5PSV4	323 aa		27.63	■■■□□ 2.01
VEGFA-231	ENST00000640499	EGFLAM	Q63HQ2	1017 aa		27.63	■■■□□ 2.01
VEGFA-231	ENST00000640499	PLEKHA7	Q6IQ23	1121 aa		27.63	■■■□□ 2.01
VEGFA-231	ENST00000640499	FBXL22	Q6P050	247 aa		27.63	■■■□□ 2.01
VEGFA-231	ENST00000640499	CHSY1	Q86X52	802 aa		27.63	■■■□□ 2.01
VEGFA-231	ENST00000640499	ZNF683	Q8IZ20	524 aa		27.63	■■■□□ 2.01
VEGFA-231	ENST00000640499	IGSF8	Q969P0	613 aa		27.63	■■■□□ 2.01
VEGFA-231	ENST00000640499	DDX50	Q9BQ39	737 aa	Known RBP	27.63	■■■□□ 2.01
VEGFA-231	ENST00000640499	NENF	Q9UMX5	172 aa		27.63	■■■□□ 2.01
VEGFA-231	ENST00000640499	DMD	P11532	3685 aa		27.62	■■■□□ 2.01
VEGFA-231	ENST00000640499		A0A087X0T9	212 aa		27.62	■■■□□ 2.01
VEGFA-231	ENST00000640499	RTN2	O75298	545 aa		27.62	■■■□□ 2.01
VEGFA-231	ENST00000640499	KLF8	O95600	359 aa	Predicted RBP	27.62	■■■□□ 2.01
VEGFA-231	ENST00000640499	FAM228B	P0C875	321 aa		27.62	■■■□□ 2.01
VEGFA-231	ENST00000640499	RDX	P35241	583 aa	Known RBP	27.62	■■■□□ 2.01
VEGFA-231	ENST00000640499	AUH	Q13825	339 aa	Known RBP	27.62	■■■□□ 2.01
VEGFA-231	ENST00000640499	DMC1	Q14565	340 aa		27.62	■■■□□ 2.01
VEGFA-231	ENST00000640499	TDRD12	Q587J7	1177 aa	Known RBP	27.62	■■■□□ 2.01
VEGFA-231	ENST00000640499	FSCB	Q5H9T9	825 aa		27.62	■■■□□ 2.01
VEGFA-231	ENST00000640499	DNAJC24	Q6P3W2	148 aa		27.62	■■■□□ 2.01
VEGFA-231	ENST00000640499	TMEM92	Q6UXU6	159 aa		27.62	■■■□□ 2.01
VEGFA-231	ENST00000640499	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	27.62	■■■□□ 2.01	7e-8	■■□□□ 11.5
VEGFA-231	ENST00000640499	TXNDC5	Q8NBS9	432 aa	Known RBP	27.62	■■■□□ 2.01
VEGFA-231	ENST00000640499	HJURP	Q8NCD3	748 aa	Predicted RBP	27.62	■■■□□ 2.01
VEGFA-231	ENST00000640499	KCNV2	Q8TDN2	545 aa		27.62	■■■□□ 2.01
VEGFA-231	ENST00000640499	SLC12A6	Q9UHW9	1150 aa		27.62	■■■□□ 2.01
VEGFA-231	ENST00000640499	MMP17	Q9ULZ9	603 aa		27.62	■■■□□ 2.01
VEGFA-231	ENST00000640499	MYO15A	Q9UKN7	3530 aa		27.62	■■■□□ 2.01
VEGFA-231	ENST00000640499	HOXA6	P31267	233 aa		27.61	■■■□□ 2.01
VEGFA-231	ENST00000640499	SDC4	P31431	198 aa		27.61	■■■□□ 2.01
VEGFA-231	ENST00000640499	CD70	P32970	193 aa		27.61	■■■□□ 2.01
VEGFA-231	ENST00000640499	HDAC4	P56524	1084 aa		27.61	■■■□□ 2.01
VEGFA-231	ENST00000640499	TRIM14	Q14142	442 aa		27.61	■■■□□ 2.01
VEGFA-231	ENST00000640499	FAM131B	Q86XD5	332 aa		27.61	■■■□□ 2.01
VEGFA-231	ENST00000640499	DRC7	Q8IY82	874 aa		27.61	■■■□□ 2.01
VEGFA-231	ENST00000640499	ZBTB44	Q8NCP5	570 aa		27.61	■■■□□ 2.01
VEGFA-231	ENST00000640499	OR8K1	Q8NGG5	319 aa		27.61	■■■□□ 2.01
VEGFA-231	ENST00000640499	CCDC26	Q8TAB7	109 aa		27.61	■■■□□ 2.01
VEGFA-231	ENST00000640499	TRIM5	Q9C035	493 aa		27.61	■■■□□ 2.01
VEGFA-231	ENST00000640499	IRF2BPL	Q9H1B7	796 aa		27.61	■■■□□ 2.01
VEGFA-231	ENST00000640499		R4GN57	208 aa		27.61	■■■□□ 2.01
VEGFA-231	ENST00000640499	GPD1	P21695	349 aa		27.6	■■■□□ 2.01
VEGFA-231	ENST00000640499	NBL1	P41271	181 aa		27.6	■■■□□ 2.01
VEGFA-231	ENST00000640499	ADK	P55263	362 aa	Known RBP	27.6	■■■□□ 2.01
VEGFA-231	ENST00000640499	CDO1	Q16878	200 aa		27.6	■■■□□ 2.01
VEGFA-231	ENST00000640499	ASTE1	Q2TB18	679 aa	Predicted RBP	27.6	■■■□□ 2.01
VEGFA-231	ENST00000640499	C5orf22	Q49AR2	442 aa		27.6	■■■□□ 2.01
VEGFA-231	ENST00000640499	PPP1R2P3	Q6NXS1	205 aa		27.6	■■■□□ 2.01
VEGFA-231	ENST00000640499	ADIPOR2	Q86V24	386 aa		27.6	■■■□□ 2.01
VEGFA-231	ENST00000640499	CIR1	Q86X95	450 aa	Predicted RBP	27.6	■■■□□ 2.01
VEGFA-231	ENST00000640499	ZNF513	Q8N8E2	541 aa	Predicted RBP	27.6	■■■□□ 2.01
VEGFA-231	ENST00000640499	FIBIN	Q8TAL6	211 aa		27.6	■■■□□ 2.01
VEGFA-231	ENST00000640499	SORCS1	Q8WY21	1168 aa		27.6	■■■□□ 2.01
VEGFA-231	ENST00000640499	MCEE	Q96PE7	176 aa		27.6	■■■□□ 2.01
VEGFA-231	ENST00000640499	MAGEB5	Q9BZ81	275 aa		27.6	■■■□□ 2.01
VEGFA-231	ENST00000640499	ABCB8	Q9NUT2	735 aa		27.6	■■■□□ 2.01
VEGFA-231	ENST00000640499		F5H5T6	163 aa		27.59	■■■□□ 2.01
VEGFA-231	ENST00000640499	MFAP3L	O75121	409 aa		27.59	■■■□□ 2.01
VEGFA-231	ENST00000640499	PXN	P49023	591 aa	Predicted RBP	27.59	■■■□□ 2.01
VEGFA-231	ENST00000640499	ZNF143	P52747	638 aa	Predicted RBP	27.59	■■■□□ 2.01
VEGFA-231	ENST00000640499	STRADA	Q7RTN6	431 aa		27.59	■■■□□ 2.01
VEGFA-231	ENST00000640499	ANKS1B	Q7Z6G8	1248 aa		27.59	■■■□□ 2.01
VEGFA-231	ENST00000640499	ACD	Q96AP0	544 aa		27.59	■■■□□ 2.01
VEGFA-231	ENST00000640499	HHIP	Q96QV1	700 aa		27.59	■■■□□ 2.01
VEGFA-231	ENST00000640499	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	27.59	■■■□□ 2.01
VEGFA-231	ENST00000640499	TRIM7	Q9C029	511 aa		27.59	■■■□□ 2.01
VEGFA-231	ENST00000640499	SIK2	Q9H0K1	926 aa		27.59	■■■□□ 2.01
VEGFA-231	ENST00000640499	CD248	Q9HCU0	757 aa		27.59	■■■□□ 2.01
VEGFA-231	ENST00000640499	ZSCAN32	Q9NX65	697 aa		27.59	■■■□□ 2.01
VEGFA-231	ENST00000640499	INTS6	Q9UL03	887 aa	Known RBP	27.59	■■■□□ 2.01
VEGFA-231	ENST00000640499	VANGL2	Q9ULK5	521 aa		27.59	■■■□□ 2.01
VEGFA-231	ENST00000640499	SLC8A2	Q9UPR5	921 aa		27.59	■■■□□ 2.01
VEGFA-231	ENST00000640499	CCP110	O43303	1012 aa		27.58	■■■□□ 2.01
VEGFA-231	ENST00000640499	LILRB5	O75023	590 aa		27.58	■■■□□ 2.01
VEGFA-231	ENST00000640499	LUC7L3	O95232	432 aa	Known RBP	27.58	■■■□□ 2.01
VEGFA-231	ENST00000640499	EIF4A3	P38919	411 aa	Known RBP	27.58	■■■□□ 2.01
VEGFA-231	ENST00000640499	FNTB	P49356	437 aa		27.58	■■■□□ 2.01
VEGFA-231	ENST00000640499	ZNF75D	P51815	510 aa		27.58	■■■□□ 2.01
VEGFA-231	ENST00000640499	LMAN2	Q12907	356 aa		27.58	■■■□□ 2.01
VEGFA-231	ENST00000640499	CRY1	Q16526	586 aa		27.58	■■■□□ 2.01
VEGFA-231	ENST00000640499	HSF5	Q4G112	596 aa	Predicted RBP	27.58	■■■□□ 2.01
VEGFA-231	ENST00000640499	NUDT18	Q6ZVK8	323 aa		27.58	■■■□□ 2.01
VEGFA-231	ENST00000640499	SND1	Q7KZF4	910 aa	Known RBP eCLIP	27.58	■■■□□ 2.01	4e-9	■■□□□ 11.7
VEGFA-231	ENST00000640499	TMC6	Q7Z403	805 aa		27.58	■■■□□ 2.01
VEGFA-231	ENST00000640499	FAM172A	Q8WUF8	416 aa		27.58	■■■□□ 2.01
VEGFA-231	ENST00000640499	C1orf74	Q96LT6	269 aa		27.58	■■■□□ 2.01

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms