RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 FAM72BQ86X60 149 aa13.65□□□□□ -0.22
GTF3A-209ENST00000640289 NIPA2Q8N8Q9 360 aa13.65□□□□□ -0.22
GTF3A-209ENST00000640289 HJURPQ8NCD3 748 aaPredicted RBP13.65□□□□□ -0.22
GTF3A-209ENST00000640289 FLCNQ8NFG4 579 aa13.65□□□□□ -0.22
GTF3A-209ENST00000640289 CD101Q93033 1021 aa13.65□□□□□ -0.22
GTF3A-209ENST00000640289 NTAN1Q96AB6 310 aa13.65□□□□□ -0.22
GTF3A-209ENST00000640289 SHDQ96IW2 340 aa13.65□□□□□ -0.22
GTF3A-209ENST00000640289 ZNF830Q96NB3 372 aaPredicted RBP13.65□□□□□ -0.22
GTF3A-209ENST00000640289 HAPLN3Q96S86 360 aa13.65□□□□□ -0.22
GTF3A-209ENST00000640289 P2RY13Q9BPV8 354 aa13.65□□□□□ -0.22
GTF3A-209ENST00000640289 MFSD1Q9H3U5 465 aa13.65□□□□□ -0.22
GTF3A-209ENST00000640289 LTB4R2Q9NPC1 389 aa13.65□□□□□ -0.22
GTF3A-209ENST00000640289 LUC7LQ9NQ29 371 aaKnown RBP13.65□□□□□ -0.22
GTF3A-209ENST00000640289 DNAJC17Q9NVM6 304 aaKnown RBP13.65□□□□□ -0.22
GTF3A-209ENST00000640289 TMEM51Q9NW97 253 aa13.65□□□□□ -0.22
GTF3A-209ENST00000640289 SALL4Q9UJQ4 1053 aa13.65□□□□□ -0.22
GTF3A-209ENST00000640289 DUSP10Q9Y6W6 482 aa13.65□□□□□ -0.22
GTF3A-209ENST00000640289 ANTXRLA6NF34 631 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 E9PAM4 449 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 STK25O00506 426 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 MAN2B1O00754 1011 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 BUB1O43683 1085 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 PRPSAP2O60256 369 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 CACNG3O60359 315 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 SRGAP2O75044 1071 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 TULP3O75386 442 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 TARSP26639 723 aaKnown RBP13.64□□□□□ -0.23
GTF3A-209ENST00000640289 IL1R2P27930 398 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 PCK1P35558 622 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 NOP2P46087 812 aaKnown RBP13.64□□□□□ -0.23
GTF3A-209ENST00000640289 AMPD2Q01433 879 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 SCAPQ12770 1279 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 MTA1Q13330 715 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 UBXN2BQ14CS0 331 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 ACAP1Q15027 740 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 TCEAL1Q15170 157 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 CA9Q16790 459 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 CWF19L1Q69YN2 538 aaKnown RBP13.64□□□□□ -0.23
GTF3A-209ENST00000640289 TXNRD3NBQ6F5E7 133 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 ASTLQ6HA08 431 aaPredicted RBP13.64□□□□□ -0.23
GTF3A-209ENST00000640289 FSTL4Q6MZW2 842 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 KIAA1328Q86T90 577 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 SFTPA1Q8IWL2 248 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 ZNF683Q8IZ20 524 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 PHTF2Q8N3S3 785 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 WFDC5Q8TCV5 224 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 EZH1Q92800 747 aaPredicted RBP13.64□□□□□ -0.23
GTF3A-209ENST00000640289 MSANTD3Q96H12 275 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 C1orf74Q96LT6 269 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 RPRD1AQ96P16 312 aaPredicted RBP13.64□□□□□ -0.23
GTF3A-209ENST00000640289 XPO6Q96QU8 1125 aaKnown RBP13.64□□□□□ -0.23
GTF3A-209ENST00000640289 SNRNP25Q9BV90 132 aaKnown RBP13.64□□□□□ -0.23
GTF3A-209ENST00000640289 KCNF1Q9H3M0 494 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 ZWILCHQ9H900 591 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 C11orf16Q9NQ32 467 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 OR12D3Q9UGF7 316 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 FBXO10Q9UK96 956 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 USP18Q9UMW8 372 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 ADGRG1Q9Y653 693 aa13.64□□□□□ -0.23
GTF3A-209ENST00000640289 A0A0A6YYK5 440 aaPredicted RBP13.63□□□□□ -0.23
GTF3A-209ENST00000640289 TYW5A2RUC4 315 aaKnown RBP13.63□□□□□ -0.23
GTF3A-209ENST00000640289 FAM170BA6NMN3 283 aa13.63□□□□□ -0.23
GTF3A-209ENST00000640289 DLL1O00548 723 aa13.63□□□□□ -0.23
GTF3A-209ENST00000640289 PJA2O43164 708 aa13.63□□□□□ -0.23
GTF3A-209ENST00000640289 CNTN5O94779 1100 aa13.63□□□□□ -0.23
GTF3A-209ENST00000640289 EGFP01133 1207 aa13.63□□□□□ -0.23
GTF3A-209ENST00000640289 CISD3P0C7P0 127 aa13.63□□□□□ -0.23
GTF3A-209ENST00000640289 GJC1P36383 396 aa13.63□□□□□ -0.23
GTF3A-209ENST00000640289 SSR1P43307 286 aaKnown RBP13.63□□□□□ -0.23
GTF3A-209ENST00000640289 DGKGP49619 791 aa13.63□□□□□ -0.23
GTF3A-209ENST00000640289 SLC25A11Q02978 314 aaKnown RBP13.63□□□□□ -0.23
GTF3A-209ENST00000640289 SMTNL2Q2TAL5 461 aa13.63□□□□□ -0.23
GTF3A-209ENST00000640289 ALFQ53S48 1182 aa13.63□□□□□ -0.23
GTF3A-209ENST00000640289 TMEM196Q5HYL7 178 aa13.63□□□□□ -0.23
GTF3A-209ENST00000640289 EFHC2Q5JST6 749 aa13.63□□□□□ -0.23
GTF3A-209ENST00000640289 KCNT1Q5JUK3 1230 aa13.63□□□□□ -0.23
GTF3A-209ENST00000640289 RABGAP1LQ5R372 815 aa13.63□□□□□ -0.23
GTF3A-209ENST00000640289 ERMARDQ5T6L9 678 aa13.63□□□□□ -0.23
GTF3A-209ENST00000640289 RNF43Q68DV7 783 aa13.63□□□□□ -0.23
GTF3A-209ENST00000640289 MFN1Q8IWA4 741 aa13.63□□□□□ -0.23
GTF3A-209ENST00000640289 ZNF687Q8N1G0 1237 aa13.63□□□□□ -0.23
GTF3A-209ENST00000640289 CARNMT1Q8N4J0 409 aa13.63□□□□□ -0.23
GTF3A-209ENST00000640289 PNKPQ96T60 521 aa13.63□□□□□ -0.23
GTF3A-209ENST00000640289 OSBPL2Q9H1P3 480 aa13.63□□□□□ -0.23
GTF3A-209ENST00000640289 GOLPH3Q9H4A6 298 aa13.63□□□□□ -0.23
GTF3A-209ENST00000640289 RBM12Q9NTZ6 932 aaKnown RBP13.63□□□□□ -0.23
GTF3A-209ENST00000640289 MPP6Q9NZW5 540 aa13.63□□□□□ -0.23
GTF3A-209ENST00000640289 DEC1Q9P2X7 70 aa13.63□□□□□ -0.23
GTF3A-209ENST00000640289 TRIM10Q9UDY6 481 aa13.63□□□□□ -0.23
GTF3A-209ENST00000640289 AP4E1Q9UPM8 1137 aa13.63□□□□□ -0.23
GTF3A-209ENST00000640289 PI15O43692 258 aa13.62□□□□□ -0.23
GTF3A-209ENST00000640289 NRDCO43847 1150 aa13.62□□□□□ -0.23
GTF3A-209ENST00000640289 CREB3O43889 395 aa13.62□□□□□ -0.23
GTF3A-209ENST00000640289 BUB1BO60566 1050 aaPredicted RBP13.62□□□□□ -0.23
GTF3A-209ENST00000640289 LRIG2O94898 1065 aa13.62□□□□□ -0.23
GTF3A-209ENST00000640289 KAT7O95251 611 aa13.62□□□□□ -0.23
GTF3A-209ENST00000640289 EIF2DP41214 584 aaKnown RBP13.62□□□□□ -0.23
GTF3A-209ENST00000640289 ARHGAP25P42331 645 aa13.62□□□□□ -0.23
GTF3A-209ENST00000640289 AIF1P55008 147 aa13.62□□□□□ -0.23
GTF3A-209ENST00000640289 HADHBP55084 474 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms