RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 SCUBE3Q8IX30 993 aa15.63■□□□□ 0.09
SYNE2-228ENST00000639659 ANKRD52Q8NB46 1076 aa15.63■□□□□ 0.09
SYNE2-228ENST00000639659 UBA3Q8TBC4 463 aa15.63■□□□□ 0.09
SYNE2-228ENST00000639659 NXPE2Q96DL1 559 aa15.63■□□□□ 0.09
SYNE2-228ENST00000639659 CNDP2Q96KP4 475 aaKnown RBP15.63■□□□□ 0.09
SYNE2-228ENST00000639659 FBRSQ9HAH7 460 aa15.63■□□□□ 0.09
SYNE2-228ENST00000639659 FBXL12Q9NXK8 326 aa15.63■□□□□ 0.09
SYNE2-228ENST00000639659 HBS1LQ9Y450 684 aaKnown RBP15.63■□□□□ 0.09
SYNE2-228ENST00000639659 AK5Q9Y6K8 562 aa15.63■□□□□ 0.09
SYNE2-228ENST00000639659 A0A1W2PP55 124 aa15.62■□□□□ 0.09
SYNE2-228ENST00000639659 ENC1O14682 589 aa15.62■□□□□ 0.09
SYNE2-228ENST00000639659 XPO1O14980 1071 aaKnown RBP15.62■□□□□ 0.09
SYNE2-228ENST00000639659 RNASEH2AO75792 299 aaKnown RBP15.62■□□□□ 0.09
SYNE2-228ENST00000639659 LDOC1O95751 146 aaPredicted RBP15.62■□□□□ 0.09
SYNE2-228ENST00000639659 IGHV4-34P06331 123 aa15.62■□□□□ 0.09
SYNE2-228ENST00000639659 ITPKBP27987 946 aa15.62■□□□□ 0.09
SYNE2-228ENST00000639659 HNF1BP35680 557 aa15.62■□□□□ 0.09
SYNE2-228ENST00000639659 ZNF445P59923 1031 aa15.62■□□□□ 0.09
SYNE2-228ENST00000639659 ZBTB16Q05516 673 aa15.62■□□□□ 0.09
SYNE2-228ENST00000639659 ADAM9Q13443 819 aa15.62■□□□□ 0.09
SYNE2-228ENST00000639659 SGO2Q562F6 1265 aa15.62■□□□□ 0.09
SYNE2-228ENST00000639659 DCAF17Q5H9S7 520 aaPredicted RBP15.62■□□□□ 0.09
SYNE2-228ENST00000639659 C6orf118Q5T5N4 469 aa15.62■□□□□ 0.09
SYNE2-228ENST00000639659 ADGRF1Q5T601 910 aa15.62■□□□□ 0.09
SYNE2-228ENST00000639659 TCERG1LQ5VWI1 586 aa15.62■□□□□ 0.09
SYNE2-228ENST00000639659 BSPRYQ5W0U4 402 aa15.62■□□□□ 0.09
SYNE2-228ENST00000639659 ARHGAP17Q68EM7 881 aa15.62■□□□□ 0.09
SYNE2-228ENST00000639659 NCEH1Q6PIU2 408 aa15.62■□□□□ 0.09
SYNE2-228ENST00000639659 BHLHA9Q7RTU4 235 aa15.62■□□□□ 0.09
SYNE2-228ENST00000639659 MFN1Q8IWA4 741 aa15.62■□□□□ 0.09
SYNE2-228ENST00000639659 TTC39CQ8N584 583 aa15.62■□□□□ 0.09
SYNE2-228ENST00000639659 FBXL13Q8NEE6 735 aa15.62■□□□□ 0.09
SYNE2-228ENST00000639659 TMEM174Q8WUU8 243 aa15.62■□□□□ 0.09
SYNE2-228ENST00000639659 GOLGA1Q92805 767 aa15.62■□□□□ 0.09
SYNE2-228ENST00000639659 PABPC3Q9H361 631 aaKnown RBP15.62■□□□□ 0.09
SYNE2-228ENST00000639659 OSGEPQ9NPF4 335 aa15.62■□□□□ 0.09
SYNE2-228ENST00000639659 RAB20Q9NX57 234 aa15.62■□□□□ 0.09
SYNE2-228ENST00000639659 SERGEFQ9UGK8 458 aa15.62■□□□□ 0.09
SYNE2-228ENST00000639659 SUN2Q9UH99 717 aa15.62■□□□□ 0.09
SYNE2-228ENST00000639659 CFAP45Q9UL16 551 aa15.62■□□□□ 0.09
SYNE2-228ENST00000639659 CEP83Q9Y592 693 aa15.62■□□□□ 0.09
SYNE2-228ENST00000639659 A0A087WV48 116 aa15.61■□□□□ 0.09
SYNE2-228ENST00000639659 A0A1B0GTQ1 180 aa15.61■□□□□ 0.09
SYNE2-228ENST00000639659 YJEFN3A6XGL0 299 aa15.61■□□□□ 0.09
SYNE2-228ENST00000639659 E7ENQ6 273 aa15.61■□□□□ 0.09
SYNE2-228ENST00000639659 MID1O15344 667 aa15.61■□□□□ 0.09
SYNE2-228ENST00000639659 RNASEH1O60930 286 aaKnown RBP15.61■□□□□ 0.09
SYNE2-228ENST00000639659 SIN3BO75182 1162 aa15.61■□□□□ 0.09
SYNE2-228ENST00000639659 RFPL3O75679 317 aa15.61■□□□□ 0.09
SYNE2-228ENST00000639659 PSMD8P48556 350 aa15.61■□□□□ 0.09
SYNE2-228ENST00000639659 NUMBP49757 651 aa15.61■□□□□ 0.09
SYNE2-228ENST00000639659 RGS7P49802 495 aa15.61■□□□□ 0.09
SYNE2-228ENST00000639659 RACK1P63244 317 aaKnown RBP15.61■□□□□ 0.09
SYNE2-228ENST00000639659 BST2Q10589 180 aaKnown RBP15.61■□□□□ 0.09
SYNE2-228ENST00000639659 PM20D1Q6GTS8 502 aa15.61■□□□□ 0.09
SYNE2-228ENST00000639659 LRRC69Q6ZNQ3 347 aa15.61■□□□□ 0.09
SYNE2-228ENST00000639659 TMPRSS12Q86WS5 348 aa15.61■□□□□ 0.09
SYNE2-228ENST00000639659 MMAAQ8IVH4 418 aaKnown RBP15.61■□□□□ 0.09
SYNE2-228ENST00000639659 CARNMT1Q8N4J0 409 aa15.61■□□□□ 0.09
SYNE2-228ENST00000639659 EID2Q8N6I1 236 aa15.61■□□□□ 0.09
SYNE2-228ENST00000639659 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.61■□□□□ 0.09
SYNE2-228ENST00000639659 SKA1Q96BD8 255 aa15.61■□□□□ 0.09
SYNE2-228ENST00000639659 ELF4Q99607 663 aaPredicted RBP15.61■□□□□ 0.09
SYNE2-228ENST00000639659 OMDQ99983 421 aa15.61■□□□□ 0.09
SYNE2-228ENST00000639659 UBXN6Q9BZV1 441 aa15.61■□□□□ 0.09
SYNE2-228ENST00000639659 SHROOM3Q8TF72 1996 aa15.6■□□□□ 0.09
SYNE2-228ENST00000639659 A0A1W2PPC4 97 aa15.6■□□□□ 0.09
SYNE2-228ENST00000639659 TYW5A2RUC4 315 aaKnown RBP15.6■□□□□ 0.09
SYNE2-228ENST00000639659 LRRC72A6NJI9 287 aa15.6■□□□□ 0.09
SYNE2-228ENST00000639659 VILLO15195 856 aa15.6■□□□□ 0.09
SYNE2-228ENST00000639659 EPB41P11171 864 aaKnown RBP15.6■□□□□ 0.09
SYNE2-228ENST00000639659 SLC6A4P31645 630 aa15.6■□□□□ 0.09
SYNE2-228ENST00000639659 CSKP41240 450 aa15.6■□□□□ 0.09
SYNE2-228ENST00000639659 SLC11A2P49281 568 aa15.6■□□□□ 0.09
SYNE2-228ENST00000639659 GALCP54803 685 aa15.6■□□□□ 0.09
SYNE2-228ENST00000639659 LRMPQ12912 555 aa15.6■□□□□ 0.09
SYNE2-228ENST00000639659 PKP1Q13835 747 aa15.6■□□□□ 0.09
SYNE2-228ENST00000639659 CCDC117Q8IWD4 279 aaPredicted RBP15.6■□□□□ 0.09
SYNE2-228ENST00000639659 ADAM32Q8TC27 787 aa15.6■□□□□ 0.09
SYNE2-228ENST00000639659 UBL7Q96S82 380 aaPredicted RBP15.6■□□□□ 0.09
SYNE2-228ENST00000639659 ORAI3Q9BRQ5 295 aa15.6■□□□□ 0.09
SYNE2-228ENST00000639659 ABCC13Q9NSE7 274 aa15.6■□□□□ 0.09
SYNE2-228ENST00000639659 ASXL3Q9C0F0 2248 aa15.6■□□□□ 0.09
SYNE2-228ENST00000639659 SMG1Q96Q15 3661 aaKnown RBP15.59■□□□□ 0.09
SYNE2-228ENST00000639659 DFNA5O60443 496 aa15.59■□□□□ 0.09
SYNE2-228ENST00000639659 STX10O60499 249 aa15.59■□□□□ 0.09
SYNE2-228ENST00000639659 LATS1O95835 1130 aa15.59■□□□□ 0.09
SYNE2-228ENST00000639659 WNT1P04628 370 aa15.59■□□□□ 0.09
SYNE2-228ENST00000639659 GTF2H1P32780 548 aa15.59■□□□□ 0.09
SYNE2-228ENST00000639659 SYKP43405 635 aa15.59■□□□□ 0.09
SYNE2-228ENST00000639659 C19orf57Q0VDD7 668 aa15.59■□□□□ 0.09
SYNE2-228ENST00000639659 CDH18Q13634 790 aa15.59■□□□□ 0.09
SYNE2-228ENST00000639659 CST6Q15828 149 aa15.59■□□□□ 0.09
SYNE2-228ENST00000639659 HES3Q5TGS1 186 aa15.59■□□□□ 0.09
SYNE2-228ENST00000639659 PIK3R6Q5UE93 754 aa15.59■□□□□ 0.09
SYNE2-228ENST00000639659 SMYD4Q8IYR2 804 aaPredicted RBP15.59■□□□□ 0.09
SYNE2-228ENST00000639659 HJURPQ8NCD3 748 aaPredicted RBP15.59■□□□□ 0.09
SYNE2-228ENST00000639659 RSPH9Q9H1X1 276 aaPredicted RBP15.59■□□□□ 0.09
SYNE2-228ENST00000639659 NEUROG2Q9H2A3 272 aa15.59■□□□□ 0.09
SYNE2-228ENST00000639659 GDF3Q9NR23 364 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms