RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 IRF2BP2Q7Z5L9 587 aa7.31□□□□□ -1.24
NECAP1-213ENST00000638883 RALGPS2Q86X27 583 aaPredicted RBP7.31□□□□□ -1.24
NECAP1-213ENST00000638883 CADM3Q8N126 398 aa7.31□□□□□ -1.24
NECAP1-213ENST00000638883 C4orf32Q8N8J7 132 aa7.31□□□□□ -1.24
NECAP1-213ENST00000638883 PDCD6IPQ8WUM4 868 aaKnown RBP7.31□□□□□ -1.24
NECAP1-213ENST00000638883 ATL1Q8WXF7 558 aa7.31□□□□□ -1.24
NECAP1-213ENST00000638883 NSUN4Q96CB9 384 aaKnown RBP7.31□□□□□ -1.24
NECAP1-213ENST00000638883 SGF29Q96ES7 293 aa7.31□□□□□ -1.24
NECAP1-213ENST00000638883 ZC3H12CQ9C0D7 883 aaKnown RBP7.31□□□□□ -1.24
NECAP1-213ENST00000638883 RUBCNLQ9H714 662 aa7.31□□□□□ -1.24
NECAP1-213ENST00000638883 IL17RBQ9NRM6 502 aa7.31□□□□□ -1.24
NECAP1-213ENST00000638883 CDH22Q9UJ99 828 aa7.31□□□□□ -1.24
NECAP1-213ENST00000638883 DNAJC16Q9Y2G8 782 aa7.31□□□□□ -1.24
NECAP1-213ENST00000638883 TCRBV7S2A1N4TA0A589 114 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 MYMKA6NI61 221 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 SOBPA7XYQ1 873 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 CENPXA8MT69 81 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 RIMBP2O15034 1052 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 RAD51BO15315 384 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 ABCB1P08183 1280 aaPredicted RBP7.3□□□□□ -1.24
NECAP1-213ENST00000638883 ITIH1P19827 911 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 ANXA13P27216 316 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 MSX2P35548 267 aaPredicted RBP7.3□□□□□ -1.24
NECAP1-213ENST00000638883 BLVRAP53004 296 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 GPC5P78333 572 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 CENPCQ03188 943 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 SNAPC2Q13487 334 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 ART3Q13508 389 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 LGSNQ5TDP6 509 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 ZNF746Q6NUN9 644 aaPredicted RBP7.3□□□□□ -1.24
NECAP1-213ENST00000638883 SYDE1Q6ZW31 735 aaPredicted RBP7.3□□□□□ -1.24
NECAP1-213ENST00000638883 GPR180Q86V85 440 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 ZNF295-AS1Q8N0V1 137 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 ASCC1Q8N9N2 400 aaKnown RBP7.3□□□□□ -1.24
NECAP1-213ENST00000638883 LINC00116Q8NCU8 138 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 FIG4Q92562 907 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 PSKH2Q96QS6 385 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 DNAJC18Q9H819 358 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 SLC38A10Q9HBR0 1119 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 AVENQ9NQS1 362 aaPredicted RBP7.3□□□□□ -1.24
NECAP1-213ENST00000638883 SNTG2Q9NY99 539 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 RNF181Q9P0P0 153 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 ATP6V1HQ9UI12 483 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 SLC8A2Q9UPR5 921 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 PCDHGA8Q9Y5G5 932 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 SNX13Q9Y5W8 968 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 MUC3AQ02505 3323 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 ZMPSTE24O75844 475 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 NADKO95544 446 aaPredicted RBP7.3□□□□□ -1.24
NECAP1-213ENST00000638883 FGRP09769 529 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 FGFR3P22607 806 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 ACADSBP45954 432 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 PPP2R2BQ00005 443 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 TRIM25Q14258 630 aaKnown RBP7.3□□□□□ -1.24
NECAP1-213ENST00000638883 DRAP1Q14919 205 aaPredicted RBP7.3□□□□□ -1.24
NECAP1-213ENST00000638883 BBS9Q3SYG4 887 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 SDE2Q6IQ49 451 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 RINT1Q6NUQ1 792 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 TMEM26Q6ZUK4 368 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 FBXW8Q8N3Y1 598 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 DTX3Q8N9I9 347 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 ARHGEF26Q96DR7 871 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 MCRS1Q96EZ8 462 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 DYNLL2Q96FJ2 89 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 TSNARE1Q96NA8 513 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 RAD21L1Q9H4I0 556 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 SP140LQ9H930 580 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 DCP1AQ9NPI6 582 aaPredicted RBP7.3□□□□□ -1.24
NECAP1-213ENST00000638883 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.3□□□□□ -1.24
NECAP1-213ENST00000638883 CNTNAP4Q9C0A0 1308 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 TCEA3O75764 348 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 ENO3P13929 434 aaPredicted RBP7.3□□□□□ -1.24
NECAP1-213ENST00000638883 KRT20P35900 424 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 NUDT2P50583 147 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 NAPAP54920 295 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 BOLA3Q53S33 107 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 AARS2Q5JTZ9 985 aaKnown RBP7.3□□□□□ -1.24
NECAP1-213ENST00000638883 ZFP1Q6P2D0 407 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 PLPP7Q8NBV4 271 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 FNIP1Q8TF40 1166 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 CYGBQ8WWM9 190 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 CDK5RAP1Q96SZ6 601 aaKnown RBP7.3□□□□□ -1.24
NECAP1-213ENST00000638883 AIFM2Q9BRQ8 373 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 ACAT2Q9BWD1 397 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 TMEM206Q9H813 350 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 PRDM9Q9NQV7 894 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 DNAJC12Q9UKB3 198 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 GRID1Q9ULK0 1009 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 PADI4Q9UM07 663 aa7.3□□□□□ -1.24
NECAP1-213ENST00000638883 M0R3G1 203 aa7.29□□□□□ -1.24
NECAP1-213ENST00000638883 LAD1O00515 517 aa7.29□□□□□ -1.24
NECAP1-213ENST00000638883 VWA5AO00534 786 aa7.29□□□□□ -1.24
NECAP1-213ENST00000638883 ARHGEF9O43307 516 aa7.29□□□□□ -1.24
NECAP1-213ENST00000638883 GSNP06396 782 aa7.29□□□□□ -1.24
NECAP1-213ENST00000638883 DBTP11182 482 aaKnown RBP7.29□□□□□ -1.24
NECAP1-213ENST00000638883 CDH1P12830 882 aa7.29□□□□□ -1.24
NECAP1-213ENST00000638883 CES1P23141 567 aa7.29□□□□□ -1.24
NECAP1-213ENST00000638883 HADHAP40939 763 aa7.29□□□□□ -1.24
NECAP1-213ENST00000638883 NDST2P52849 883 aa7.29□□□□□ -1.24
NECAP1-213ENST00000638883 GPS1Q13098 491 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms