RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 ARL4AP40617 200 aa20.67■□□□□ 0.9
SYNGAP1-227ENST00000638142 CRADDP78560 199 aa20.67■□□□□ 0.9
SYNGAP1-227ENST00000638142 PGM2L1Q6PCE3 622 aa20.67■□□□□ 0.9
SYNGAP1-227ENST00000638142 C10orf107Q8IVU9 208 aa20.67■□□□□ 0.9
SYNGAP1-227ENST00000638142 ACTRT2Q8TDY3 377 aa20.67■□□□□ 0.9
SYNGAP1-227ENST00000638142 R3HDMLQ9H3Y0 253 aa20.67■□□□□ 0.9
SYNGAP1-227ENST00000638142 COPG2Q9UBF2 871 aa20.67■□□□□ 0.9
SYNGAP1-227ENST00000638142 CITO14578 2027 aa20.67■□□□□ 0.9
SYNGAP1-227ENST00000638142 CNMDO75829 334 aa20.67■□□□□ 0.9
SYNGAP1-227ENST00000638142 MGAT1P26572 445 aa20.67■□□□□ 0.9
SYNGAP1-227ENST00000638142 HARS2P49590 506 aaKnown RBP20.67■□□□□ 0.9
SYNGAP1-227ENST00000638142 GADL1Q6ZQY3 521 aa20.67■□□□□ 0.9
SYNGAP1-227ENST00000638142 UNC93AQ86WB7 457 aa20.67■□□□□ 0.9
SYNGAP1-227ENST00000638142 CCDC185Q8N715 623 aa20.67■□□□□ 0.9
SYNGAP1-227ENST00000638142 POU5F2Q8N7G0 328 aa20.67■□□□□ 0.9
SYNGAP1-227ENST00000638142 AZIN2Q96A70 460 aa20.67■□□□□ 0.9
SYNGAP1-227ENST00000638142 MAGEB5Q9BZ81 275 aa20.67■□□□□ 0.9
SYNGAP1-227ENST00000638142 TRIP11Q15643 1979 aa20.67■□□□□ 0.9
SYNGAP1-227ENST00000638142 TSPAN1O60635 241 aa20.66■□□□□ 0.9
SYNGAP1-227ENST00000638142 PRKCGP05129 697 aa20.66■□□□□ 0.9
SYNGAP1-227ENST00000638142 MX2P20592 715 aa20.66■□□□□ 0.9
SYNGAP1-227ENST00000638142 GRM5P41594 1212 aa20.66■□□□□ 0.9
SYNGAP1-227ENST00000638142 SESN2P58004 480 aaPredicted RBP20.66■□□□□ 0.9
SYNGAP1-227ENST00000638142 ABCE1P61221 599 aaKnown RBP20.66■□□□□ 0.9
SYNGAP1-227ENST00000638142 DEUP1Q05D60 604 aa20.66■□□□□ 0.9
SYNGAP1-227ENST00000638142 TTLL4Q14679 1199 aa20.66■□□□□ 0.9
SYNGAP1-227ENST00000638142 PDPK2PQ6A1A2 396 aa20.66■□□□□ 0.9
SYNGAP1-227ENST00000638142 RAPH1Q70E73 1250 aa20.66■□□□□ 0.9
SYNGAP1-227ENST00000638142 FERMT1Q9BQL6 677 aa20.66■□□□□ 0.9
SYNGAP1-227ENST00000638142 PNPOQ9NVS9 261 aa20.66■□□□□ 0.9
SYNGAP1-227ENST00000638142 TXNDC16Q9P2K2 825 aa20.66■□□□□ 0.9
SYNGAP1-227ENST00000638142 NME7Q9Y5B8 376 aa20.66■□□□□ 0.9
SYNGAP1-227ENST00000638142 PSAT1Q9Y617 370 aa20.66■□□□□ 0.9
SYNGAP1-227ENST00000638142 PLXNA1Q9UIW2 1896 aa20.66■□□□□ 0.9
SYNGAP1-227ENST00000638142 DNAJC25-GNG10A0A024R161 153 aa20.66■□□□□ 0.9
SYNGAP1-227ENST00000638142 VTNP04004 478 aa20.66■□□□□ 0.9
SYNGAP1-227ENST00000638142 RALBP11234 206 aa20.66■□□□□ 0.9
SYNGAP1-227ENST00000638142 GOT1P17174 413 aa20.66■□□□□ 0.9
SYNGAP1-227ENST00000638142 GARSP41250 739 aaKnown RBP20.66■□□□□ 0.9
SYNGAP1-227ENST00000638142 BST2Q10589 180 aaKnown RBP20.66■□□□□ 0.9
SYNGAP1-227ENST00000638142 RALGPS1Q5JS13 557 aa20.66■□□□□ 0.9
SYNGAP1-227ENST00000638142 STRADAQ7RTN6 431 aa20.66■□□□□ 0.9
SYNGAP1-227ENST00000638142 OR6Y1Q8NGX8 325 aa20.66■□□□□ 0.9
SYNGAP1-227ENST00000638142 CLEC4CQ8WTT0 213 aa20.66■□□□□ 0.9
SYNGAP1-227ENST00000638142 LGMNQ99538 433 aa20.66■□□□□ 0.9
SYNGAP1-227ENST00000638142 IL1RAPL1Q9NZN1 696 aa20.66■□□□□ 0.9
SYNGAP1-227ENST00000638142 DERAQ9Y315 318 aa20.66■□□□□ 0.9
SYNGAP1-227ENST00000638142 ZNF195O14628 629 aa20.65■□□□□ 0.9
SYNGAP1-227ENST00000638142 TYK2P29597 1187 aa20.65■□□□□ 0.9
SYNGAP1-227ENST00000638142 GP5P40197 560 aa20.65■□□□□ 0.9
SYNGAP1-227ENST00000638142 RPS6KA3P51812 740 aa20.65■□□□□ 0.9
SYNGAP1-227ENST00000638142 XIAPP98170 497 aa20.65■□□□□ 0.9
SYNGAP1-227ENST00000638142 ASPHQ12797 758 aa20.65■□□□□ 0.9
SYNGAP1-227ENST00000638142 DYNC1I2Q13409 638 aaKnown RBP20.65■□□□□ 0.9
SYNGAP1-227ENST00000638142 SOWAHAQ2M3V2 549 aa20.65■□□□□ 0.9
SYNGAP1-227ENST00000638142 CCDC153Q494R4 210 aa20.65■□□□□ 0.9
SYNGAP1-227ENST00000638142 ACAD11Q709F0 780 aa20.65■□□□□ 0.9
SYNGAP1-227ENST00000638142 PDSS2Q86YH6 399 aa20.65■□□□□ 0.9
SYNGAP1-227ENST00000638142 CDH22Q9UJ99 828 aa20.65■□□□□ 0.9
SYNGAP1-227ENST00000638142 MFHAS1Q9Y4C4 1052 aa20.65■□□□□ 0.9
SYNGAP1-227ENST00000638142 NR2E3Q9Y5X4 410 aa20.65■□□□□ 0.9
SYNGAP1-227ENST00000638142 LTBP3Q9NS15 1303 aa20.65■□□□□ 0.9
SYNGAP1-227ENST00000638142 RNF103O00237 685 aa20.65■□□□□ 0.9
SYNGAP1-227ENST00000638142 CDK7P50613 346 aa20.65■□□□□ 0.9
SYNGAP1-227ENST00000638142 BCAT1P54687 386 aa20.65■□□□□ 0.9
SYNGAP1-227ENST00000638142 KCTD2Q14681 263 aa20.65■□□□□ 0.9
SYNGAP1-227ENST00000638142 RASSF3Q86WH2 238 aa20.65■□□□□ 0.9
SYNGAP1-227ENST00000638142 PYDC1Q8WXC3 89 aa20.65■□□□□ 0.9
SYNGAP1-227ENST00000638142 TUBGCP5Q96RT8 1024 aa20.65■□□□□ 0.9
SYNGAP1-227ENST00000638142 TMEM216Q9P0N5 145 aa20.65■□□□□ 0.9
SYNGAP1-227ENST00000638142 F5H423 210 aaPredicted RBP20.64■□□□□ 0.9
SYNGAP1-227ENST00000638142 IRF6O14896 467 aa20.64■□□□□ 0.9
SYNGAP1-227ENST00000638142 POLBP06746 335 aa20.64■□□□□ 0.9
SYNGAP1-227ENST00000638142 ZCCHC18P0CG32 403 aa20.64■□□□□ 0.9
SYNGAP1-227ENST00000638142 PRDX6P30041 224 aa20.64■□□□□ 0.9
SYNGAP1-227ENST00000638142 RPL34P49207 117 aaKnown RBP20.64■□□□□ 0.9
SYNGAP1-227ENST00000638142 CCNIQ14094 377 aa20.64■□□□□ 0.9
SYNGAP1-227ENST00000638142 PSTKQ8IV42 348 aaKnown RBP20.64■□□□□ 0.9
SYNGAP1-227ENST00000638142 ANKRD52Q8NB46 1076 aa20.64■□□□□ 0.9
SYNGAP1-227ENST00000638142 SHKBP1Q8TBC3 707 aa20.64■□□□□ 0.9
SYNGAP1-227ENST00000638142 NLRP7Q8WX94 980 aa20.64■□□□□ 0.9
SYNGAP1-227ENST00000638142 CNKSR2Q8WXI2 1034 aa20.64■□□□□ 0.9
SYNGAP1-227ENST00000638142 CPNE1Q99829 537 aa20.64■□□□□ 0.9
SYNGAP1-227ENST00000638142 PLEKHA5Q9HAU0 1116 aa20.64■□□□□ 0.9
SYNGAP1-227ENST00000638142 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.64■□□□□ 0.9
SYNGAP1-227ENST00000638142 MFSD11O43934 449 aa20.64■□□□□ 0.89
SYNGAP1-227ENST00000638142 LGALS2P05162 132 aa20.64■□□□□ 0.89
SYNGAP1-227ENST00000638142 ARRB2P32121 409 aa20.64■□□□□ 0.89
SYNGAP1-227ENST00000638142 GLUD2P49448 558 aa20.64■□□□□ 0.89
SYNGAP1-227ENST00000638142 EPHB1P54762 984 aa20.64■□□□□ 0.89
SYNGAP1-227ENST00000638142 GRTP1Q5TC63 336 aa20.64■□□□□ 0.89
SYNGAP1-227ENST00000638142 ATG14Q6ZNE5 492 aa20.64■□□□□ 0.89
SYNGAP1-227ENST00000638142 RSPH3Q86UC2 560 aa20.64■□□□□ 0.89
SYNGAP1-227ENST00000638142 LRRC52Q8N7C0 313 aa20.64■□□□□ 0.89
SYNGAP1-227ENST00000638142 OR6B3Q8NGW1 331 aa20.64■□□□□ 0.89
SYNGAP1-227ENST00000638142 SLC26A7Q8TE54 656 aa20.64■□□□□ 0.89
SYNGAP1-227ENST00000638142 NCSTNQ92542 709 aa20.64■□□□□ 0.89
SYNGAP1-227ENST00000638142 ISL2Q96A47 359 aa20.64■□□□□ 0.89
SYNGAP1-227ENST00000638142 P2RY11Q96G91 374 aa20.64■□□□□ 0.89
SYNGAP1-227ENST00000638142 DDX50Q9BQ39 737 aaKnown RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms