RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 MBLAC2Q68D91 279 aa17.37■□□□□ 0.37
CACNA1A-259ENST00000638114 RNF43Q68DV7 783 aa17.37■□□□□ 0.37
CACNA1A-259ENST00000638114 OLFML1Q6UWY5 402 aa17.37■□□□□ 0.37
CACNA1A-259ENST00000638114 ADIPOR2Q86V24 386 aa17.37■□□□□ 0.37
CACNA1A-259ENST00000638114 CHSY1Q86X52 802 aa17.37■□□□□ 0.37
CACNA1A-259ENST00000638114 CCDC117Q8IWD4 279 aaPredicted RBP17.37■□□□□ 0.37
CACNA1A-259ENST00000638114 LGI2Q8N0V4 545 aa17.37■□□□□ 0.37
CACNA1A-259ENST00000638114 CFAP52Q8N1V2 620 aa17.37■□□□□ 0.37
CACNA1A-259ENST00000638114 CARNMT1Q8N4J0 409 aa17.37■□□□□ 0.37
CACNA1A-259ENST00000638114 DEFB119Q8N690 84 aa17.37■□□□□ 0.37
CACNA1A-259ENST00000638114 ATP6V0D2Q8N8Y2 350 aa17.37■□□□□ 0.37
CACNA1A-259ENST00000638114 TMEM35BQ8NCS4 154 aa17.37■□□□□ 0.37
CACNA1A-259ENST00000638114 RNF34Q969K3 372 aa17.37■□□□□ 0.37
CACNA1A-259ENST00000638114 BTN2A3PQ96KV6 586 aa17.37■□□□□ 0.37
CACNA1A-259ENST00000638114 STK33Q9BYT3 514 aa17.37■□□□□ 0.37
CACNA1A-259ENST00000638114 MKRN2Q9H000 416 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-259ENST00000638114 PRDM16Q9HAZ2 1276 aa17.37■□□□□ 0.37
CACNA1A-259ENST00000638114 CD93Q9NPY3 652 aa17.37■□□□□ 0.37
CACNA1A-259ENST00000638114 SLC12A6Q9UHW9 1150 aa17.37■□□□□ 0.37
CACNA1A-259ENST00000638114 GON4LQ3T8J9 2241 aa17.36■□□□□ 0.37
CACNA1A-259ENST00000638114 FAM170AA1A519 330 aa17.36■□□□□ 0.37
CACNA1A-259ENST00000638114 PATE3B3GLJ2 98 aa17.36■□□□□ 0.37
CACNA1A-259ENST00000638114 F8VZ95 297 aa17.36■□□□□ 0.37
CACNA1A-259ENST00000638114 KHNYNO15037 678 aaKnown RBP17.36■□□□□ 0.37
CACNA1A-259ENST00000638114 ATP5BP06576 529 aaKnown RBP17.36■□□□□ 0.37
CACNA1A-259ENST00000638114 HLA-EP13747 358 aa17.36■□□□□ 0.37
CACNA1A-259ENST00000638114 POLR2EP19388 210 aaKnown RBP17.36■□□□□ 0.37
CACNA1A-259ENST00000638114 KLK7P49862 253 aa17.36■□□□□ 0.37
CACNA1A-259ENST00000638114 SLC6A3Q01959 620 aa17.36■□□□□ 0.37
CACNA1A-259ENST00000638114 CDH18Q13634 790 aa17.36■□□□□ 0.37
CACNA1A-259ENST00000638114 SPDYCQ5MJ68 293 aa17.36■□□□□ 0.37
CACNA1A-259ENST00000638114 STPG1Q5TH74 334 aa17.36■□□□□ 0.37
CACNA1A-259ENST00000638114 IL31Q6EBC2 164 aa17.36■□□□□ 0.37
CACNA1A-259ENST00000638114 KIAA0907Q7Z7F0 614 aaPredicted RBP17.36■□□□□ 0.37
CACNA1A-259ENST00000638114 ANKRD20A12PQ8NF67 263 aa17.36■□□□□ 0.37
CACNA1A-259ENST00000638114 FIBINQ8TAL6 211 aa17.36■□□□□ 0.37
CACNA1A-259ENST00000638114 EDEM2Q9BV94 578 aa17.36■□□□□ 0.37
CACNA1A-259ENST00000638114 GANQ9H2C0 597 aa17.36■□□□□ 0.37
CACNA1A-259ENST00000638114 FAM207AQ9NSI2 230 aaPredicted RBP17.36■□□□□ 0.37
CACNA1A-259ENST00000638114 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.36■□□□□ 0.37
CACNA1A-259ENST00000638114 ATXN2Q99700 1313 aaKnown RBP17.36■□□□□ 0.37
CACNA1A-259ENST00000638114 CKAP5Q14008 2032 aa17.36■□□□□ 0.37
CACNA1A-259ENST00000638114 SPTBN2O15020 2390 aa17.36■□□□□ 0.37
CACNA1A-259ENST00000638114 TNRC6BQ9UPQ9 1833 aaKnown RBP17.35■□□□□ 0.37
CACNA1A-259ENST00000638114 CEP192Q8TEP8 1941 aa17.35■□□□□ 0.37
CACNA1A-259ENST00000638114 MED19A0JLT2 244 aaPredicted RBP17.35■□□□□ 0.37
CACNA1A-259ENST00000638114 NDUFS2O75306 463 aa17.35■□□□□ 0.37
CACNA1A-259ENST00000638114 DAB1O75553 588 aa17.35■□□□□ 0.37
CACNA1A-259ENST00000638114 DLDP09622 509 aaKnown RBP17.35■□□□□ 0.37
CACNA1A-259ENST00000638114 SLC2A3P11169 496 aa17.35■□□□□ 0.37
CACNA1A-259ENST00000638114 ABCB4P21439 1286 aa17.35■□□□□ 0.37
CACNA1A-259ENST00000638114 TACR2P21452 398 aa17.35■□□□□ 0.37
CACNA1A-259ENST00000638114 ITPKAP23677 461 aa17.35■□□□□ 0.37
CACNA1A-259ENST00000638114 CCR1P32246 355 aa17.35■□□□□ 0.37
CACNA1A-259ENST00000638114 CDH5P33151 784 aaPredicted RBP17.35■□□□□ 0.37
CACNA1A-259ENST00000638114 COPB1P53618 953 aaKnown RBP17.35■□□□□ 0.37
CACNA1A-259ENST00000638114 LIMK1P53667 647 aa17.35■□□□□ 0.37
CACNA1A-259ENST00000638114 LMAN2Q12907 356 aa17.35■□□□□ 0.37
CACNA1A-259ENST00000638114 NME3Q13232 169 aa17.35■□□□□ 0.37
CACNA1A-259ENST00000638114 SLC26A9Q7LBE3 791 aa17.35■□□□□ 0.37
CACNA1A-259ENST00000638114 NOP9Q86U38 636 aaKnown RBP17.35■□□□□ 0.37
CACNA1A-259ENST00000638114 CACUL1Q86Y37 369 aa17.35■□□□□ 0.37
CACNA1A-259ENST00000638114 TMPRSS6Q8IU80 811 aa17.35■□□□□ 0.37
CACNA1A-259ENST00000638114 SYT12Q8IV01 421 aa17.35■□□□□ 0.37
CACNA1A-259ENST00000638114 ZNF366Q8N895 744 aa17.35■□□□□ 0.37
CACNA1A-259ENST00000638114 PRCCQ92733 491 aaPredicted RBP17.35■□□□□ 0.37
CACNA1A-259ENST00000638114 SIPA1Q96FS4 1042 aa17.35■□□□□ 0.37
CACNA1A-259ENST00000638114 MUC22E2RYF6 1773 aaPredicted RBP17.35■□□□□ 0.37
CACNA1A-259ENST00000638114 LNP1A1A4G5 178 aa17.34■□□□□ 0.37
CACNA1A-259ENST00000638114 KCNU1A8MYU2 1149 aa17.34■□□□□ 0.37
CACNA1A-259ENST00000638114 F5H5T6 163 aa17.34■□□□□ 0.37
CACNA1A-259ENST00000638114 H0Y626 953 aa17.34■□□□□ 0.37
CACNA1A-259ENST00000638114 GFPT2O94808 682 aa17.34■□□□□ 0.37
CACNA1A-259ENST00000638114 LUC7L3O95232 432 aaKnown RBP17.34■□□□□ 0.37
CACNA1A-259ENST00000638114 MMEP08473 750 aa17.34■□□□□ 0.37
CACNA1A-259ENST00000638114 DPP6P42658 865 aa17.34■□□□□ 0.37
CACNA1A-259ENST00000638114 COPAP53621 1224 aa17.34■□□□□ 0.37
CACNA1A-259ENST00000638114 RNASE9P60153 205 aaKnown RBP17.34■□□□□ 0.37
CACNA1A-259ENST00000638114 POLR2FP61218 127 aaKnown RBP17.34■□□□□ 0.37
CACNA1A-259ENST00000638114 ZNF33AQ06730 810 aa17.34■□□□□ 0.37
CACNA1A-259ENST00000638114 EIF4EBP2Q13542 120 aaPredicted RBP17.34■□□□□ 0.37
CACNA1A-259ENST00000638114 PTPRNQ16849 979 aa17.34■□□□□ 0.37
CACNA1A-259ENST00000638114 ZDHHC17Q8IUH5 632 aa17.34■□□□□ 0.37
CACNA1A-259ENST00000638114 ZNF397Q8NF99 534 aaPredicted RBP17.34■□□□□ 0.37
CACNA1A-259ENST00000638114 EPS8L1Q8TE68 723 aa17.34■□□□□ 0.37
CACNA1A-259ENST00000638114 DDX1Q92499 740 aaKnown RBP17.34■□□□□ 0.37
CACNA1A-259ENST00000638114 C18orf8Q96DM3 657 aa17.34■□□□□ 0.37
CACNA1A-259ENST00000638114 PCMTD1Q96MG8 357 aaPredicted RBP17.34■□□□□ 0.37
CACNA1A-259ENST00000638114 TMEM245Q9H330 911 aa17.34■□□□□ 0.37
CACNA1A-259ENST00000638114 NLRC4Q9NPP4 1024 aa17.34■□□□□ 0.37
CACNA1A-259ENST00000638114 TMEM74BQ9NUR3 256 aa17.34■□□□□ 0.37
CACNA1A-259ENST00000638114 LAMA1P25391 3075 aa17.33■□□□□ 0.37
CACNA1A-259ENST00000638114 M0QYT0 321 aa17.33■□□□□ 0.36
CACNA1A-259ENST00000638114 LSM8O95777 96 aaKnown RBP17.33■□□□□ 0.36
CACNA1A-259ENST00000638114 ACADMP11310 421 aa17.33■□□□□ 0.36
CACNA1A-259ENST00000638114 CDK11BP21127 795 aaKnown RBP17.33■□□□□ 0.36
CACNA1A-259ENST00000638114 KCNA4P22459 653 aa17.33■□□□□ 0.36
CACNA1A-259ENST00000638114 CD6P30203 668 aa17.33■□□□□ 0.36
CACNA1A-259ENST00000638114 NOS2P35228 1153 aa17.33■□□□□ 0.36
CACNA1A-259ENST00000638114 MATKP42679 507 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms