RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 PRSS16Q9NQE7 514 aa19.2■□□□□ 0.66
CLN6-220ENST00000637450 CNTN6Q9UQ52 1028 aa19.2■□□□□ 0.66
CLN6-220ENST00000637450 MSRB2Q9Y3D2 182 aa19.2■□□□□ 0.66
CLN6-220ENST00000637450 FAM221BA6H8Z2 402 aa19.19■□□□□ 0.66
CLN6-220ENST00000637450 TMEM8BA6NDV4 472 aa19.19■□□□□ 0.66
CLN6-220ENST00000637450 CD70P32970 193 aa19.19■□□□□ 0.66
CLN6-220ENST00000637450 GPD2P43304 727 aa19.19■□□□□ 0.66
CLN6-220ENST00000637450 MARSP56192 900 aaKnown RBP19.19■□□□□ 0.66
CLN6-220ENST00000637450 TRIP6Q15654 476 aaKnown RBP19.19■□□□□ 0.66
CLN6-220ENST00000637450 NADSYN1Q6IA69 706 aa19.19■□□□□ 0.66
CLN6-220ENST00000637450 SCUBE3Q8IX30 993 aa19.19■□□□□ 0.66
CLN6-220ENST00000637450 FCRL2Q96LA5 508 aaPredicted RBP19.19■□□□□ 0.66
CLN6-220ENST00000637450 KREMEN1Q96MU8 473 aa19.19■□□□□ 0.66
CLN6-220ENST00000637450 MIS12Q9H081 205 aa19.19■□□□□ 0.66
CLN6-220ENST00000637450 FBRSQ9HAH7 460 aa19.19■□□□□ 0.66
CLN6-220ENST00000637450 SUN2Q9UH99 717 aa19.19■□□□□ 0.66
CLN6-220ENST00000637450 EIF2B4Q9UI10 523 aaKnown RBP19.19■□□□□ 0.66
CLN6-220ENST00000637450 KLK13Q9UKR3 277 aa19.19■□□□□ 0.66
CLN6-220ENST00000637450 SPEGQ15772 3267 aa19.18■□□□□ 0.66
CLN6-220ENST00000637450 GNA14O95837 355 aa19.18■□□□□ 0.66
CLN6-220ENST00000637450 POLR2EP19388 210 aaKnown RBP19.18■□□□□ 0.66
CLN6-220ENST00000637450 ACSL1P33121 698 aa19.18■□□□□ 0.66
CLN6-220ENST00000637450 BNC1Q01954 994 aa19.18■□□□□ 0.66
CLN6-220ENST00000637450 ZBTB16Q05516 673 aa19.18■□□□□ 0.66
CLN6-220ENST00000637450 ZNF423Q2M1K9 1284 aa19.18■□□□□ 0.66
CLN6-220ENST00000637450 NAXDQ8IW45 347 aa19.18■□□□□ 0.66
CLN6-220ENST00000637450 ZNF557Q8N988 423 aaPredicted RBP19.18■□□□□ 0.66
CLN6-220ENST00000637450 FIBINQ8TAL6 211 aa19.18■□□□□ 0.66
CLN6-220ENST00000637450 DQX1Q8TE96 717 aaKnown RBP19.18■□□□□ 0.66
CLN6-220ENST00000637450 TTC17Q96AE7 1141 aa19.18■□□□□ 0.66
CLN6-220ENST00000637450 DDX50Q9BQ39 737 aaKnown RBP19.18■□□□□ 0.66
CLN6-220ENST00000637450 C6orf106Q9H6K1 298 aaPredicted RBP19.18■□□□□ 0.66
CLN6-220ENST00000637450 CTNND2Q9UQB3 1225 aa19.18■□□□□ 0.66
CLN6-220ENST00000637450 TLR6Q9Y2C9 796 aa19.18■□□□□ 0.66
CLN6-220ENST00000637450 PCDHB9Q9Y5E1 797 aa19.18■□□□□ 0.66
CLN6-220ENST00000637450 CKAP5Q14008 2032 aa19.18■□□□□ 0.66
CLN6-220ENST00000637450 AFPP02771 609 aaKnown RBP19.17■□□□□ 0.66
CLN6-220ENST00000637450 STX17P56962 302 aa19.17■□□□□ 0.66
CLN6-220ENST00000637450 RPS14P62263 151 aaKnown RBP19.17■□□□□ 0.66
CLN6-220ENST00000637450 NNTQ13423 1086 aa19.17■□□□□ 0.66
CLN6-220ENST00000637450 IL27RAQ6UWB1 636 aa19.17■□□□□ 0.66
CLN6-220ENST00000637450 BEND5Q7L4P6 421 aa19.17■□□□□ 0.66
CLN6-220ENST00000637450 RAB44Q7Z6P3 723 aaPredicted RBP19.17■□□□□ 0.66
CLN6-220ENST00000637450 MFN1Q8IWA4 741 aa19.17■□□□□ 0.66
CLN6-220ENST00000637450 CHCHD4Q8N4Q1 142 aa19.17■□□□□ 0.66
CLN6-220ENST00000637450 HJURPQ8NCD3 748 aaPredicted RBP19.17■□□□□ 0.66
CLN6-220ENST00000637450 STK32AQ8WU08 396 aa19.17■□□□□ 0.66
CLN6-220ENST00000637450 MYEOVQ96EZ4 313 aa19.17■□□□□ 0.66
CLN6-220ENST00000637450 SLC39A13Q96H72 371 aa19.17■□□□□ 0.66
CLN6-220ENST00000637450 SERPINB11Q96P15 392 aa19.17■□□□□ 0.66
CLN6-220ENST00000637450 SRRTQ9BXP5 876 aaKnown RBP19.17■□□□□ 0.66
CLN6-220ENST00000637450 INTS2Q9H0H0 1204 aaKnown RBP19.17■□□□□ 0.66
CLN6-220ENST00000637450 GAREM1Q9H706 876 aa19.17■□□□□ 0.66
CLN6-220ENST00000637450 IL21RQ9HBE5 538 aa19.17■□□□□ 0.66
CLN6-220ENST00000637450 STIM2Q9P246 746 aa19.17■□□□□ 0.66
CLN6-220ENST00000637450 NAALADL1Q9UQQ1 740 aa19.17■□□□□ 0.66
CLN6-220ENST00000637450 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.17■□□□□ 0.66
CLN6-220ENST00000637450 BIN1O00499 593 aa19.16■□□□□ 0.66
CLN6-220ENST00000637450 SART1O43290 800 aaKnown RBP19.16■□□□□ 0.66
CLN6-220ENST00000637450 CBFA2T3O75081 653 aa19.16■□□□□ 0.66
CLN6-220ENST00000637450 ZNF883P0CG24 379 aa19.16■□□□□ 0.66
CLN6-220ENST00000637450 ACADSBP45954 432 aa19.16■□□□□ 0.66
CLN6-220ENST00000637450 HLA-BQ31612 363 aa19.16■□□□□ 0.66
CLN6-220ENST00000637450 DENND1BQ6P3S1 775 aa19.16■□□□□ 0.66
CLN6-220ENST00000637450 MYO19Q96H55 970 aa19.16■□□□□ 0.66
CLN6-220ENST00000637450 PRICKLE1Q96MT3 831 aaPredicted RBP19.16■□□□□ 0.66
CLN6-220ENST00000637450 SLC4A5Q9BY07 1137 aa19.16■□□□□ 0.66
CLN6-220ENST00000637450 BTBD1Q9H0C5 482 aa19.16■□□□□ 0.66
CLN6-220ENST00000637450 ST7Q9NRC1 585 aa19.16■□□□□ 0.66
CLN6-220ENST00000637450 INTS6Q9UL03 887 aaKnown RBP19.16■□□□□ 0.66
CLN6-220ENST00000637450 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.16■□□□□ 0.66
CLN6-220ENST00000637450 SLCO1B1Q9Y6L6 691 aa19.16■□□□□ 0.66
CLN6-220ENST00000637450 CER1O95813 267 aa19.15■□□□□ 0.66
CLN6-220ENST00000637450 DNTTP04053 509 aa19.15■□□□□ 0.66
CLN6-220ENST00000637450 MATKP42679 507 aa19.15■□□□□ 0.66
CLN6-220ENST00000637450 CSNK1EP49674 416 aaKnown RBP19.15■□□□□ 0.66
CLN6-220ENST00000637450 AFF3P51826 1226 aaKnown RBP19.15■□□□□ 0.66
CLN6-220ENST00000637450 RPS24P62847 133 aaKnown RBP19.15■□□□□ 0.66
CLN6-220ENST00000637450 PAK1Q13153 545 aa19.15■□□□□ 0.66
CLN6-220ENST00000637450 MEA1Q16626 185 aa19.15■□□□□ 0.66
CLN6-220ENST00000637450 MS4A13Q5J8X5 152 aa19.15■□□□□ 0.66
CLN6-220ENST00000637450 SYPL2Q5VXT5 272 aa19.15■□□□□ 0.66
CLN6-220ENST00000637450 DBX2Q6ZNG2 339 aa19.15■□□□□ 0.66
CLN6-220ENST00000637450 ADAM32Q8TC27 787 aa19.15■□□□□ 0.66
CLN6-220ENST00000637450 SNX19Q92543 992 aa19.15■□□□□ 0.66
CLN6-220ENST00000637450 FAM149B1Q96BN6 582 aa19.15■□□□□ 0.66
CLN6-220ENST00000637450 NUCKS1Q9H1E3 243 aaKnown RBP19.15■□□□□ 0.66
CLN6-220ENST00000637450 UBE2TQ9NPD8 197 aaPredicted RBP19.15■□□□□ 0.66
CLN6-220ENST00000637450 OSGEPQ9NPF4 335 aa19.15■□□□□ 0.66
CLN6-220ENST00000637450 PCOLCE2Q9UKZ9 415 aa19.15■□□□□ 0.66
CLN6-220ENST00000637450 DMXL2Q8TDJ6 3036 aa19.15■□□□□ 0.66
CLN6-220ENST00000637450 A0A1B0GVT2 93 aa19.14■□□□□ 0.65
CLN6-220ENST00000637450 TYW5A2RUC4 315 aaKnown RBP19.14■□□□□ 0.65
CLN6-220ENST00000637450 GADD45BO75293 160 aaPredicted RBP19.14■□□□□ 0.65
CLN6-220ENST00000637450 SEMA4FO95754 770 aa19.14■□□□□ 0.65
CLN6-220ENST00000637450 ASLP04424 464 aa19.14■□□□□ 0.65
CLN6-220ENST00000637450 FTH1P19P0C7X4 201 aa19.14■□□□□ 0.65
CLN6-220ENST00000637450 KRT5P13647 590 aa19.14■□□□□ 0.65
CLN6-220ENST00000637450 CSKP41240 450 aa19.14■□□□□ 0.65
CLN6-220ENST00000637450 ZNF776Q68DI1 518 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms