RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 IGF2-ASQ6U949 168 aa18.95■□□□□ 0.62
CLN6-212ENST00000636020 ATG14Q6ZNE5 492 aa18.95■□□□□ 0.62
CLN6-212ENST00000636020 AHI1Q8N157 1196 aa18.95■□□□□ 0.62
CLN6-212ENST00000636020 MFSD2AQ8NA29 543 aa18.95■□□□□ 0.62
CLN6-212ENST00000636020 IGSF5Q9NSI5 407 aa18.95■□□□□ 0.62
CLN6-212ENST00000636020 CCDC39Q9UFE4 941 aa18.95■□□□□ 0.62
CLN6-212ENST00000636020 GGA2Q9UJY4 613 aa18.95■□□□□ 0.62
CLN6-212ENST00000636020 USP3Q9Y6I4 520 aa18.95■□□□□ 0.62
CLN6-212ENST00000636020 TLN1Q9Y490 2541 aaKnown RBP18.94■□□□□ 0.62
CLN6-212ENST00000636020 A0A1W2PP55 124 aa18.94■□□□□ 0.62
CLN6-212ENST00000636020 MID1O15344 667 aa18.94■□□□□ 0.62
CLN6-212ENST00000636020 CSO75390 466 aaKnown RBP18.94■□□□□ 0.62
CLN6-212ENST00000636020 ATP5BP06576 529 aaKnown RBP18.94■□□□□ 0.62
CLN6-212ENST00000636020 PABPC1P11940 636 aaKnown RBP18.94■□□□□ 0.62
CLN6-212ENST00000636020 C6orf132Q5T0Z8 1188 aa18.94■□□□□ 0.62
CLN6-212ENST00000636020 SLC25A45Q8N413 288 aa18.94■□□□□ 0.62
CLN6-212ENST00000636020 MARCH2Q9P0N8 246 aa18.94■□□□□ 0.62
CLN6-212ENST00000636020 FZD4Q9ULV1 537 aa18.94■□□□□ 0.62
CLN6-212ENST00000636020 LRRK2Q5S007 2527 aa18.93■□□□□ 0.62
CLN6-212ENST00000636020 SDC3O75056 442 aa18.93■□□□□ 0.62
CLN6-212ENST00000636020 RNASEH2AO75792 299 aaKnown RBP18.93■□□□□ 0.62
CLN6-212ENST00000636020 ASIC1P78348 528 aa18.93■□□□□ 0.62
CLN6-212ENST00000636020 DAB2P98082 770 aa18.93■□□□□ 0.62
CLN6-212ENST00000636020 EHHADHQ08426 723 aa18.93■□□□□ 0.62
CLN6-212ENST00000636020 CST6Q15828 149 aa18.93■□□□□ 0.62
CLN6-212ENST00000636020 CCDC81Q6ZN84 652 aa18.93■□□□□ 0.62
CLN6-212ENST00000636020 STXBP4Q6ZWJ1 553 aa18.93■□□□□ 0.62
CLN6-212ENST00000636020 UNC93AQ86WB7 457 aa18.93■□□□□ 0.62
CLN6-212ENST00000636020 MYO19Q96H55 970 aa18.93■□□□□ 0.62
CLN6-212ENST00000636020 AGPAT3Q9NRZ7 376 aa18.93■□□□□ 0.62
CLN6-212ENST00000636020 STARD5Q9NSY2 213 aa18.93■□□□□ 0.62
CLN6-212ENST00000636020 TPX2Q9ULW0 747 aaKnown RBP18.93■□□□□ 0.62
CLN6-212ENST00000636020 MYO9AB2RTY4 2548 aa18.93■□□□□ 0.62
CLN6-212ENST00000636020 SPTAN1Q13813 2472 aaKnown RBP18.92■□□□□ 0.62
CLN6-212ENST00000636020 RELNP78509 3460 aa18.92■□□□□ 0.62
CLN6-212ENST00000636020 SLC12A8A0AV02 714 aa18.92■□□□□ 0.62
CLN6-212ENST00000636020 H3BQV1 296 aa18.92■□□□□ 0.62
CLN6-212ENST00000636020 TGFB1I1O43294 461 aa18.92■□□□□ 0.62
CLN6-212ENST00000636020 LATO43561 262 aa18.92■□□□□ 0.62
CLN6-212ENST00000636020 RNASEH1O60930 286 aaKnown RBP18.92■□□□□ 0.62
CLN6-212ENST00000636020 SIN3BO75182 1162 aa18.92■□□□□ 0.62
CLN6-212ENST00000636020 CYP2J2P51589 502 aa18.92■□□□□ 0.62
CLN6-212ENST00000636020 NFKB2Q00653 900 aa18.92■□□□□ 0.62
CLN6-212ENST00000636020 NCOA4Q13772 614 aa18.92■□□□□ 0.62
CLN6-212ENST00000636020 NAPEPLDQ6IQ20 393 aa18.92■□□□□ 0.62
CLN6-212ENST00000636020 IQCHQ86VS3 1027 aa18.92■□□□□ 0.62
CLN6-212ENST00000636020 OR4C6Q8NH72 309 aa18.92■□□□□ 0.62
CLN6-212ENST00000636020 HPS3Q969F9 1004 aa18.92■□□□□ 0.62
CLN6-212ENST00000636020 TMA16Q96EY4 203 aaKnown RBP18.92■□□□□ 0.62
CLN6-212ENST00000636020 CYFIP2Q96F07 1278 aa18.92■□□□□ 0.62
CLN6-212ENST00000636020 CCDC97Q96F63 343 aaPredicted RBP18.92■□□□□ 0.62
CLN6-212ENST00000636020 SLC46A1Q96NT5 459 aa18.92■□□□□ 0.62
CLN6-212ENST00000636020 OMDQ99983 421 aa18.92■□□□□ 0.62
CLN6-212ENST00000636020 STRIP2Q9ULQ0 834 aa18.92■□□□□ 0.62
CLN6-212ENST00000636020 NOTCH2Q04721 2471 aa18.92■□□□□ 0.62
CLN6-212ENST00000636020 A0A1B0GVM2 712 aa18.91■□□□□ 0.62
CLN6-212ENST00000636020 A0A1W2PNU3 283 aaPredicted RBP18.91■□□□□ 0.62
CLN6-212ENST00000636020 CLIC2O15247 247 aa18.91■□□□□ 0.62
CLN6-212ENST00000636020 SUV39H1O43463 412 aa18.91■□□□□ 0.62
CLN6-212ENST00000636020 CKMT1AP12532 417 aa18.91■□□□□ 0.62
CLN6-212ENST00000636020 GP1BBP13224 206 aa18.91■□□□□ 0.62
CLN6-212ENST00000636020 POLR2EP19388 210 aaKnown RBP18.91■□□□□ 0.62
CLN6-212ENST00000636020 CASP4P49662 377 aa18.91■□□□□ 0.62
CLN6-212ENST00000636020 BIRC3Q13489 604 aa18.91■□□□□ 0.62
CLN6-212ENST00000636020 TRIP4Q15650 581 aaPredicted RBP18.91■□□□□ 0.62
CLN6-212ENST00000636020 HNRNPA1L2Q32P51 320 aaKnown RBP18.91■□□□□ 0.62
CLN6-212ENST00000636020 ARL13BQ3SXY8 428 aa18.91■□□□□ 0.62
CLN6-212ENST00000636020 LINC00303Q3SY05 128 aa18.91■□□□□ 0.62
CLN6-212ENST00000636020 XKR5Q6UX68 686 aa18.91■□□□□ 0.62
CLN6-212ENST00000636020 MMAAQ8IVH4 418 aaKnown RBP18.91■□□□□ 0.62
CLN6-212ENST00000636020 CCDC65Q8IXS2 484 aa18.91■□□□□ 0.62
CLN6-212ENST00000636020 XXYLT1Q8NBI6 393 aa18.91■□□□□ 0.62
CLN6-212ENST00000636020 PLEKHO2Q8TD55 490 aa18.91■□□□□ 0.62
CLN6-212ENST00000636020 PLD4Q96BZ4 506 aa18.91■□□□□ 0.62
CLN6-212ENST00000636020 STX6O43752 255 aa18.9■□□□□ 0.62
CLN6-212ENST00000636020 LZTS3O60299 673 aaPredicted RBP18.9■□□□□ 0.62
CLN6-212ENST00000636020 MAGEC1O60732 1142 aa18.9■□□□□ 0.62
CLN6-212ENST00000636020 CLSTN1O94985 981 aa18.9■□□□□ 0.62
CLN6-212ENST00000636020 VNN1O95497 513 aa18.9■□□□□ 0.62
CLN6-212ENST00000636020 AFPP02771 609 aaKnown RBP18.9■□□□□ 0.62
CLN6-212ENST00000636020 GOT1P17174 413 aa18.9■□□□□ 0.62
CLN6-212ENST00000636020 RBMS1P29558 406 aaKnown RBP18.9■□□□□ 0.62
CLN6-212ENST00000636020 SLC8A1P32418 973 aa18.9■□□□□ 0.62
CLN6-212ENST00000636020 ADPRHP54922 357 aa18.9■□□□□ 0.62
CLN6-212ENST00000636020 ZNF445P59923 1031 aa18.9■□□□□ 0.62
CLN6-212ENST00000636020 PPP2CBP62714 309 aa18.9■□□□□ 0.62
CLN6-212ENST00000636020 PPP2CAP67775 309 aa18.9■□□□□ 0.62
CLN6-212ENST00000636020 OVGP1Q12889 678 aa18.9■□□□□ 0.62
CLN6-212ENST00000636020 WFDC5Q8TCV5 224 aa18.9■□□□□ 0.62
CLN6-212ENST00000636020 ARHGAP20Q9P2F6 1191 aa18.9■□□□□ 0.62
CLN6-212ENST00000636020 STOML2Q9UJZ1 356 aa18.9■□□□□ 0.62
CLN6-212ENST00000636020 SATB2Q9UPW6 733 aa18.9■□□□□ 0.62
CLN6-212ENST00000636020 GTF3C3Q9Y5Q9 886 aa18.9■□□□□ 0.62
CLN6-212ENST00000636020 EIF3DO15371 548 aaKnown RBP eCLIP18.89■□□□□ 0.61
CLN6-212ENST00000636020 C4BPAP04003 597 aaKnown RBP18.89■□□□□ 0.61
CLN6-212ENST00000636020 GP1BAP07359 652 aa18.89■□□□□ 0.61
CLN6-212ENST00000636020 P4HA1P13674 534 aa18.89■□□□□ 0.61
CLN6-212ENST00000636020 ITGB6P18564 788 aa18.89■□□□□ 0.61
CLN6-212ENST00000636020 DGKAP23743 735 aa18.89■□□□□ 0.61
CLN6-212ENST00000636020 CD70P32970 193 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms